Conserved Protein Domain Family
OmpR

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COG0745: OmpR (this model, PSSM-Id:223816 is obsolete and has been replaced by 440508)
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]
Statistics
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PSSM-Id: 223816
Aligned: 429 rows
Threshold Bit Score: 95.4417
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17232815   1 MRILLVEDDDLLAQAMATTLTKQHYAVDIAADG-EVAWELVSVCnYELILLDVVLPKLDGISLCRQLR-QaGYQMLILLL 78  Nostoc sp. PCC 7120
15615988   4 RSILIVDDEKAIVKMLETVLRKEGFSTIYTAYNaEEAFHYVKNYtLDVILLDVMLPDRSGFDLCPQIRgL--TQAYILFL 81  Bacillus halodurans
16077269   4 YRILIVEDDVMIGDLLQKILQREGYRVIWKTDG-ADVLSVIQK--VDLVIMDVMLPGEDGYQMSAKIKkLg-LGIPVIFL 79  Bacillus subtilis
16080375 136 ASILIVDDEKAIVDMIKRVLEKEGYRNILDAASaEEAIPVVKANkVDLIVLDVMMGGMSGFEACTLIReY--SDAPIFFL 213 Bacillus subtilis
15893581   7 SKILLVDDEESILKLLTTVLKKEGFSNVITSTNgMDGVKKCRENaPEIIILDIMLPDIDGFEVFRQIRnF--SSVPIMFL 84  Clostridium acetobu...
15896015   9 FSIMVVDDEEHIVEFLKMGLEAEGFTVYTAFNG-NDAVIYSRKLnPNLIILDVMLPYMNGYEVCSLIK-Ka-SNIPIIML 85  Clostridium acetobu...
15896754   3 KKILVVDDDRDIVKLITKSLSYEGFEMISAYSG-KEALCALKENhIDFIILDIMMPGMDGLDVCRSIRkS--YNVPILFL 79  Clostridium acetobu...
15673417   2 KKILIADDDRAILTLLSYNFRQNDYEVTIVSDG-KKAYDKARKNpFDLLLLDLMMPEYSGIEVTQKLRkE-DNFTPILIL 79  Lactococcus lactis ...
16263069  13 EHILVVDDDSRIRQMLSRYFEEEGYRVSLAGDG-QEMRERLDKQpVDVILLDLMLP------------------------ 67  Sinorhizobium meliloti
15642901   3 WKIAVVDDDKNILKKVSEKLQQLG-RVKTFLTG-EDFLNDEEa--FHVVVLDVMLPDYSGYEICRMIKeTr-PETWVILL 77  Thermotoga maritima
17232815  79 TAKDSQTDKILGLDTGADDYVVKPFDFQELSARIRALLRRG--------------NTSLPPVLAWGSLRLDPSSCEVTYA 144 Nostoc sp. PCC 7120
15615988  82 TAKVSDLDKLTGFAIGADDYVTKPFNPLEIVARINARLRREvnsvak---eqvatTSIRKGIFTFDRFTVNELAGELLVD 158 Bacillus halodurans
16077269  80 SARNDMDSKLQGLQIGE-DYMVKPFDPRELLLRMRNMLEHHy-----------------gTFTQIKHLYIDAVTKKVFNE 141 Bacillus subtilis
16080375 214 TARSSDADKLSGFAVGADDYITKPFNPLELAARIRAHLKRTyqs---------keTSSNQ-TYTYDYFTFSPQNAELIVG 283 Bacillus subtilis
15893581  85 SAKSEDTDKIIGLGLGADDYITKPFSPKEVALRVKAHLKRIemv--------kksLTNRENIIKTEHFTIDFEKGEIIKN 156 Clostridium acetobu...
15896015  86 TAKDEIDDKVLGLNLGADDYMIKPFSFKELLARINARLRNSfse--------------tlnKVVIGPFLIKDSAHEIIYK 151 Clostridium acetobu...
15896754  80 SARDKDIDKIVGLEIGADDYMAKPFSIQELTSRIRANFRKIdrlf------kewnELSPNRERNDSPLILNDKTFEAFLN 153 Clostridium acetobu...
15673417  80 TARDDDEMKLTGLSAGSDEYLDKTTPMKEIIVRADALIRRNqmynqapsetvseaLDERPSSLVTDRLVIDFIKKEVTFD 159 Lactococcus lactis ...
16263069  68 ---------------GE----DGLHL-RATYARARMYRSSC--------------------------------------- 88  Sinorhizobium meliloti
15642901  78 TLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLEREk-----------------kGLYDFGDLKIDATGFTVFLK 140 Thermotoga maritima
17232815 145 --DKPLNLTAKEFSILELFLRNNQRTFSRGAIVEKLWSAEkDPPEENTIKSHIKSLRQKLQAAGANYAFIETVYGMGYRL 222 Nostoc sp. PCC 7120
15615988 159 gr--kVPCPAQVFLLLCYFCKHPNRILSKEQLLEAVWGMD-SFVDDNTVMVHIRRIRERIEIDPSHPRYLVTVRGLGYKL 235 Bacillus halodurans
16077269 142 slHDEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLE--DRNPNIVNVHIKKIRAKINDQAG--EMIENIYGEGYRL 217 Bacillus subtilis
16080375 284 ge--aVACSAQLLQLLQYFCEHPNVVLSKDQIYEKVWGYP-SYGDNNTVMVHIRKLREKTERDPSNPEYIVTVRGLGYRF 360 Bacillus subtilis
15893581 157 dk--sTILRAKELLLLKYLVENKNIILSKEKIVNAVWEDD-YVGYDNTIMVHIRKLRQKLEDDPSNPKYILTVKGLGYKL 233 Clostridium acetobu...
15896015 152 --DDILSLSPTEYNLLKYLLLNNGIALSKDQILEKVWGYD-FTGEKNIVEVYIRYLRDKISDK-NH-TIIRTVRGVGYKV 226 Clostridium acetobu...
15896754 154 --NRKLNLSTKEFQILSMLVHNPNNVLTREQIYEHVWGDE--YGELNTVTVHIKNIRKKLGPEYD---FIKTIWGIGYKY 226 Clostridium acetobu...
15673417 160 --EKVLDLTKREFEILELLAKREGKIVSREELLQHFWGIS-DTAETRTIDVLISKIRKKLNNH-----YIKTKRGFGYYF 231 Lactococcus lactis ...
16263069     --------------------------------------------------------------------------------     Sinorhizobium meliloti
15642901 141 --GKRIHLPKKEFEILLFLAENAGKVVTREKLLETFWEDP---VSPRVVDTVIKRIRKAIEDDPNRPRYIKTIWGVGYMF 215 Thermotoga maritima
17232815 223 KALA 226 Nostoc sp. PCC 7120
15615988 236 VKEP 239 Bacillus halodurans
16077269 218 NTVV 221 Bacillus subtilis
16080375 361 IPNP 364 Bacillus subtilis
15893581 234 KL-- 235 Clostridium acetobutylicum
15896015 227 VI-- 228 Clostridium acetobutylicum
15896754 227 KERE 230 Clostridium acetobutylicum
15673417 232 EENE 235 Lactococcus lactis subsp. lactis
16263069     ----     Sinorhizobium meliloti
15642901 216 TGGE 219 Thermotoga maritima
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