Conserved Protein Domain Family
COG2865

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COG2865: COG2865 (this model, PSSM-Id:225420 is obsolete and has been replaced by 442112)
Predicted transcriptional regulator, contains HTH domain [Transcription]
Statistics
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PSSM-Id: 225420
Aligned: 13 rows
Threshold Bit Score: 307.728
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15807192   1 MTTEPAQALSPLGVLpPAGPTCVHLPLNVTpq--eLARYAVGLAN------ARGGTVMVGVDVVGq-----------EHA 61  Deinococcus radiodu...
19551275   5 ELEKDLERLRKNGKDdETVEVKSWGRLPLSkgsksFWESLSAFAN------TNGGYILLGLSEPDf----------tPVE 68  Corynebacterium glu...
15792860   3 RTVMDFKFVLRLLEA-NQFENEVVEYKKNNkdfivLGKNISALSNtaallgIDKAYIIFGIEDGTl-----------NIV 70  Campylobacter jejuni
19703536   1 MTIEEMKNLIQNGEK-IDVEFKESKEALTKd----IFDSVCSFNN------RNGGHIFLGVSDKK------------EII 57  Fusobacterium nucle...
19704165   1 MKLSDIKKIAHSILEnQNVENSFIEYKKSInfkdkILKTACAFANny--mnNEINFLFIGVEEVDnkengekaipkrPIS 78  Fusobacterium nucle...
19704983   3 LNNNEIGNIIEYLKQ-NNSETTWIEVKENKievdkLGETISAIANscllddKDYGYIIIGIKDKTw-----------EIL 70  Fusobacterium nucle...
20090964   2 SMNSWIEEIIEAGEG-YHIEFKESLDKS-------FIEEVCAFAN------SSGGKVILGVSDKG------------IIK 55  Methanosarcina acet...
20091201   1 -MTHSIAQLLSRPEG-KTLEFKQDLSSPRN-----ILKTLVAFAN------TAGGRLFIGVEDGSr-----------EVL 56  Methanosarcina acet...
20091202   1 -MN--LQSLIKSGES-ETLEFKEKFDDR-------TVESAVAFAN------AKGGMILIGVSDKG------------NIT 51  Methanosarcina acet...
20091244   4 VFRIFVSSVQKELEDeRLIIQNLVSTDP-------FLSAHCTPVLyey-epASPDKAIEGCLKTLdscq-----vylLII 70  Methanosarcina acet...
14521387   1 -MD--VSDLIKKGES-ETIEFKRELNDS-------VYKTLSAFAN------TDGGILLLGVSNDG------------KVF 51  Pyrococcus abyssi
14521706   1 MNIEEFLKLIREGES-ERIEFKSRVTKD-------IHKEICALAN------AYGGYIIIGVGKDG------------KLI 54  Pyrococcus abyssi
13357594   1 MLN--LKQYLGETNF-YDKKEKLEKKKIKS-----WLKSVCTFAN------GQGGKLIFGVNENN------------NVL 54  Ureaplasma urealyticum
15807192  62 ERDAGELHPLMIT-----HAIFELSGGRLTVNVQHHrVPGGARVLTVFVPQAPYV--LAAPDG-------------AVMA 121 Deinococcus radiodu...
19551275  69 GFDSQASIQFIRAglnpqDRDAQKVEPVPHHEIHEM-TVDGAEVVLVSVSPLSVNg-PCYYLPvgi--------tnGSFK 138 Corynebacterium glu...
15792860  71 GTNFKPKQEKKGNee-leSWLHKVLKPNIEFKIHEI-TEKEIRLVVFEIEATKIS--PIKFEE-------------KAYI 133 Campylobacter jejuni
19703536  58 GVNKNKIDKIIKEft-tsINNPQKIYPPLYLVPLVV-EIDEKIIVYIRVPKGYQVc-RHNGKI-------------WDRS 121 Fusobacterium nucle...
19704165  79 GIKESMIEGIENDl----KSLLSNITPKINYHIIQD-KIDNKYYLVVAIEQGSNG--PYQTNEkaekdk-eiklkqGRYI 150 Fusobacterium nucle...
19704983  71 GTSNRLSEYHLKGgqevkLYISTMLLPRINFEFIDDyIIDNKKISIIKIPSATHT--PISYKN-------------EIYL 135 Fusobacterium nucle...
20090964  56 GINTDNNFRSR----------IQDSLRQLQPNLNVG-IEIKDNLIIVDVLDGNDK--PYACSR-------------GFFI 109 Methanosarcina acet...
20091201  57 GVENPLDEEERVC-----SLIADNIEPRLVPNVELI-SFEDKTLLGVEVYPSGSR--PHWLKKegp--------dnGVYA 120 Methanosarcina acet...
20091202  52 GLDIGKETLAKWA-----NQVSDKTEPQLIPEIEVL-EFEGKKVVTVKIPEYPIK--PVSVRG-------------RCFK 110 Methanosarcina acet...
20091244  71 GVQYGTFTGELSIthteyHRAREEKLPILAFIKGSR-EMDREEGTDAFLRELEVDgfKYKRFGnvielqkevrealVKLL 149 Methanosarcina acet...
14521387  52 GFSGDLDSLAR----------SIRHNLRINPPIKVE-EIGEKKVVIIDVSKSPV---PISFKG-------------RYYK 104 Pyrococcus abyssi
14521706  55 GCNAKEAREKIS-------QSLLSIIPPVRIKTHVI-KIDNKEFLVIEVPKSNT----LCTVGg------------VAYI 110 Pyrococcus abyssi
13357594  55 GLENYLNDSEFIS-----ETIKTKIDNIPEFDIEIN-EYENKIILILTIFPGRNP--PYFLVDng---------skTPYK 117 Ureaplasma urealyticum
15807192 122 WDGAHLvpVLPGEGEPVADRDYTAVVPPDASLADL--DPAEVARLRLLGRRIDAANLP-------DLDFLQELGLLVPSG 192 Deinococcus radiodu...
19551275 139 RVGDED--RKLSHLEIYELQNRFVQTKTDRNPVPD--SSIDDLNNQLAASFKQRLIESnsr--slGTDDNWLLRKNITTS 212 Corynebacterium glu...
15792860 134 RIGSNRkeLDKYPEKEKKLWQVLSGFSFENEIAKSnlNIQDIYDLLDYSKCFDMLDISyd---nySSDEYIIEKLIEHGL 210 Campylobacter jejuni
19703536 122 YEGDIN--ITDNSELVYKMYARKQSSYFVNKVYPN--LKIDFLDINIIEKVRKMAILRnqnhtwkNLNDEELLRSANLIL 197 Fusobacterium nucle...
19704165 151 RISRDT--KLPNPTEEFELLKKFANFSFSSDLNNT--ATIDDLNYEYMKEYLVQTNAKqdirnmsKLDMAKSMGLVSENE 226 Fusobacterium nucle...
19704983 136 RIGSNNklAKEYPEQLRILWNKTSGFNYEETIVREklTVEEVLNFLDYRTYFKMKGWDenktsqqIIDEMELDGFIVKEE 215 Fusobacterium nucle...
20090964 110 RNGANS--QKLTRNEIIEFFQKEGRVHFDELKNDKa-VFESDFDEKAFETFLNLAGITh------SIDRMTLLKNLDCIT 180 Methanosarcina acet...
20091201 121 RLGSTN--RKADRELIAELKRTAEGKSFDEQVLPD--RTVDDLDFDAAAACFKGHRKIv------EKDLESLRLVTKYQG 190 Methanosarcina acet...
20091202 111 RVNNSN--RSMNSQEIAEMHLQSTGMSWDRFPAAG--KSLEDLDLGKVSRYIRKARVSgrkgfgeEEDPVQVLEKMELVK 186 Methanosarcina acet...
20091244 150 KDRFGI--APTSDENLIAKQTIEATSTFESQPLTR--ILWKDLDHKVARQLVAAAENRked-elsSADLLAGAMLRGLIW 224 Methanosarcina acet...
14521387 105 RVGAQT--VEMGWEDLQRFFLQKSGVTWDSLPSS---AALEDLDEETIRKFVHMARNRlpy-ineNEDVESILDKLGLLE 178 Pyrococcus abyssi
14521706 111 RVGNSI--RPLSIHEIIMLSTELGALTWDEVPVEPf-NNAKREYIEWFFDAMEKARGRki----pKEDWNRYLRSIKAVK 183 Pyrococcus abyssi
13357594 118 RVGNQS--VIASINDLLNWCLRSQNRTYDSLVSN---KLLKDVSFLMLKNEYQKHTEN--------LWEDKFLKSFELID 184 Ureaplasma urealyticum
15807192 193 G-----ALRPTLAAILLAGTDaaLRAHLPQAEVCYFHHQA-------NDVEFQFREDLRRPIPSLLLRLSELIQARNrFT 260 Deinococcus radiodu...
19551275 213 ------KGELTIAGLLALGSY--PQQFFPRVIIDVAVHPGlhkspigTSIRFEDRKICEGNLLEMVQEAMSAIKRNL-RV 283 Corynebacterium glu...
15792860 211 VknlndSFAITNLGAILFAKDltKFKGLNRKRIRFIRYQGk------NKIHTLEELEGRKGYAIGFQGLISYIMQYV-PK 283 Campylobacter jejuni
19703536 198 IdpetnKEGITLAAILLFGKDnsIMSVLPQHKTDAIFRVE-------NKDRYDDRDVIITNLIDSYDRLISFGQKHL-ND 269 Fusobacterium nucle...
19704165 227 Yg----SYRARNFAVLMFAET--PNKFIPNAHVEIIREI--------VGTDKMEAKRFDGPIWLQVKQVNRYFEDNI-MA 291 Fusobacterium nucle...
19704983 216 Ny---kFYKVKALGALLLAHNl-KDFNLERKAVRIVIYNGi------TKSSIREQLEGKKGYAIGFENIIKVLKKYLpQE 285 Fusobacterium nucle...
20090964 181 E-----DGKFTNAGVLFFARD--IDFLLNHAIVVCVLYKGt------EKVNILDKKDFKGNIVENINNAILFVKRHT-NV 246 Methanosarcina acet...
20091201 191 ------HLVPTVGGMLLFGKD--RELIFPDAWIQCGRFIGk------DKADIFDHIEIHEYLPVAVERVMEFLKKHA-MR 255 Methanosarcina acet...
20091202 187 ------DGKPTRAAGLLFCKD--GRRFLSQAVIHCGRFK--------DQTLVIDDRLIEGTLFEQVEEAMDFVRKNT-NV 249 Methanosarcina acet...
20091244 225 AspgseEYYATAAGIVLLAKD--PSAVFPQCRVLADAYRGs-----ePDGEPRDHEDIRGPMPLVIDRAVAFIDRNT-RH 296 Methanosarcina acet...
14521387 179 ------DGKITNAALLLFGKE--PQRYYIQAKVRIGRFK--------DPITIIDDKEIGGNLFTQVEEVMKVIMSHI-GV 241 Pyrococcus abyssi
14521706 184 ------GDKLTNAGVLFFTD----VETMPHAGGRIIYMR---------GDEPIATKEFHGPIWKVIDEMFNELERN--FK 242 Pyrococcus abyssi
13357594 185 N-----NNYLTNAGALFADG-----YQVYQSGVFCTRWNGktk--tnGLIEALDDAEFEGNLLFLLNSSINFIKRNS-KN 251 Ureaplasma urealyticum
15807192 261 PVQVG----LFRVEVWDHDESVYREALLNALTHRDYTLRD---VVHVHHYPDRLEIMNPGGFPGGITPGNILRh--QPKR 331 Deinococcus radiodu...
19551275 284 RRVVEg---LSGKDVLEIPEEVLREALANAVLHRDYSELAqneAIHVDIYKDRVEITSPGGLPNGKRPESILDg--YSEP 358 Corynebacterium glu...
15792860 284 NEVIEn---AIRKDTTLYPEIAIRELVANAIIHQDFTINGr--NPMIEMYSDRIEITNNGKSLIDIKRLIDMP----SKS 354 Campylobacter jejuni
19703536 270 LFVLDg---IINVNARDR---ILREIISNTLAHRDYSSGF---PAKMIIDDEKIIIEN-SNLAHGIGELDLQKf--EPFP 337 Fusobacterium nucle...
19704165 292 SYTIReadkIEHRIIYNYPLTAFEELATNAILHKEYDTPE---YVGIYIYRDRISFVNHNRPLPPVTIEALNNn--RSFD 366 Fusobacterium nucle...
19704983 286 QRPIN----GRMEVFEFYPQAIIRELIANAIIHQDLSMTGs--EIKIEVYDNRVEITNPGKSVIDLWRFYDCN-----KS 354 Fusobacterium nucle...
20090964 247 QYKIEk---LQREEIPDIPDVALREAIINAVCHRDYFDKSg--NVLIEVFDDRVEISNPGGLPSGLKPSDFGR---KSVA 318 Methanosarcina acet...
20091201 256 GADFSe---LRRRDVWSIPLTVLREAVVNAVVHADYSQRGa--PIRIAFFDDRIEIENPGILLPGMTVEDMLQg--VSKI 328 Methanosarcina acet...
20091202 250 KFVMTg--kPEREEVWDYPLEAVREAVINAVCHRDYTIMS---HIEIRIYDDELIVWSPGGLPLGLTMEDLFKp-hASKL 323 Methanosarcina acet...
20091244 297 PMKVIg---LNRVRVGEYPVEALREALVNAVAHRQYEDAGr--KIILEVFPDRVIVSSPGLPPAPITLANLRKgnyRPCS 371 Methanosarcina acet...
14521387 242 RYEFEg--eLRRKEIWDYPLDALREAIINALIHRDYTDPS---NVQIKIFR----------------------------- 287 Pyrococcus abyssi
14521706 243 WLEVTv--gAKRVRIPEYPPRAVREAIINAFAHRNYTISS---DVRVFVYADRLIIKNPGGLMPGVDLDDPEH-----VP 312 Pyrococcus abyssi
13357594 252 MWRKGv---LYRIQYPEYPIKAVQEVIVNALIHRDYSIIGs--EVHIDMYDDRLEVYSPGGMFDGNFVQNIDLynvWSIR 326 Ureaplasma urealyticum
15807192 332 RNPLLAGVLARL--------GLVEQAGVGVDKMFSLML--RHGKEPPEYVNYPDAVTLTLHGSAFDSDFVRFVARKQEEL 401 Deinococcus radiodu...
19551275 359 RNRVLSRILMDIpwthevqgVLAESNGTGVPRMFNLMR--EAGLPVPNFKIDISSVTVELSRHGLLDAQTSEWLVEKLGS 436 Corynebacterium glu...
15792860 355 RNDKLANLMRIM--------GICEERGSGVDKVIDSVE--AYQLPAPDFINNEDYFQAILFSHMPLEDMTKQDRIR---- 420 Campylobacter jejuni
19703536 338 KNPPISKVFREI--------GLADELGSGMRNTYKYTQ--LYSGMKPIFEEGNIFRTIIPLKEIATEKVGGENVSRNVPR 407 Fusobacterium nucle...
19704165 367 KRQYLNKELKDMff----slNLIESYGSGIRRAKDALK--NNGSPKLKFYPDNDVDNYTNAIMEINKEFLNIKNTTQETT 440 Fusobacterium nucle...
19704983 355 RNEKLAYYMRQL--------KLCEELGSGIDRIVEISE--LNNLFTPKFIITNEYVNAKLFREKKFEQMVEEDKIN---- 420 Fusobacterium nucle...
20090964 319 RNPLIASLLNRI--------NYIEKVGTGINRIKQAVA--ENERSSVEFSFDSGFSVIFRRLKAISEIELSEGSEKSSEK 388 Methanosarcina acet...
20091201 329 RNHVIARVFREL--------NLIEQWGSGVSRMFKEAE--ALGLPEPEIIEVGMRVRFIVHLKESIAVETPGLVTGEGKS 398 Methanosarcina acet...
20091202 324 RNKGIAEVFFDT--------KIIEQWGSGIEKIQNYCR--EAGLPEPVFEEYQGFRVIFRKGTFNEEYLRELG------- 386 Methanosarcina acet...
20091244 372 RNPVLAQCLSYF--------HRIEERGSGFRRMRDQML--NHGLDKPLIGTDTGYFQVTFPGPGENLDRILVPETILLVT 441 Methanosarcina acet...
14521387     --------------------------------------------------------------------------------     Pyrococcus abyssi
14521706 313 RNPVLSQLLYDS--------GYIEKYGYGIRMMRSECK--KHGLVEIEFKAGANTFEVIFRKKTEELLDEEDK------- 375 Pyrococcus abyssi
13357594 327 RNPILADLFARM--------NLMERRGSGLKNILEIYAskENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKI 398 Ureaplasma urealyticum
15807192 402 pqlsldmliVLSLLSregeaprAQLARALQLPEDRTPRLLRQMEDlalITRAGIGRGIAYHLAPDVAAALGQeKQRGLSA 481 Deinococcus radiodu...
19551275 437 ---------DFSNTQ-------GIALVLAKELGAVTSRDLRNQTG---HDSEDMRSLLDALVDRGVLNQNLQ-NQYQLAT 496 Corynebacterium glu...
15792860 421 ----------ATYQH--------CCLKWASR-EAMTNASLRARFKigdKQHSKASKIISDTLEAGLIKQQDP-ENKSTKH 480 Campylobacter jejuni
19703536 408 nvprnvpqkSIEEMK-------EIMKEIIKKNNRVSRKYLAEILG---VSEKTITRYIKEIPN---LSYIGK-GKNGYWK 473 Fusobacterium nucle...
19704165 441 kettketteTTKEKEni----vDKIVALMLENPKITAEQIANNLEn--ISAEGIRYHIRNLKKSGKIRREGS-TKSGKWI 513 Fusobacterium nucle...
19704983 421 ----------ILYYH--------CCFRYSIED-YMTNSSLRNRFLl--DNSKPSTDRISNLIKKAKNMKLIK-VGPNKSY 478 Fusobacterium nucle...
20090964 389 ---------SSEKSS-------EKILHFISENKYISAQELATLLG---ISSRAVEKQIANLKDKGLLKRIGP-DKGGYWE 448 Methanosarcina acet...
20091201 399 ---------RPELRP-------ELRPELRPELQPESRPELRPELR---LESLLAAKVLVLLMKNDAGKAELA-SGLGHKT 458 Methanosarcina acet...
20091202 387 ----------LNERQ-------IKAVFYVKENGKITNKEYQEISN---TIKRTASRDLAELVSLKIFEQIGT-TGKGTEY 445 Methanosarcina acet...
20091244 442 pai----evQLNERQ-------KEILKHVAVTGSVTTGWCMETLN---ISRDTAHRNLVDLVKRNILVSQG--SGRGVIY 505 Methanosarcina acet...
14521387     --------------------------------------------------------------------------------     Pyrococcus abyssi
14521706 376 -----------------------IILELLSE--PKSSGEIERVLG---LSKPTILKRLERLINLGLVKKLG--SGRSTKY 425 Pyrococcus abyssi
13357594 399 ---------SPSQRR-------KKIIEFIGQNPKTTAYELTKIFF---VSINTIERDLAKLVHDGYVEFVGS-SKNGEWK 458 Ureaplasma urealyticum
15807192 482 LPGLPEPAE 490 Deinococcus radiodurans
19551275 497 SSVNVTQSE 505 Corynebacterium glutamicum ATCC 13032
15792860 481 VKYVPFFV- 488 Campylobacter jejuni
19703536 474 LDEE----- 477 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
19704165 514 VKGRENEQK 522 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
19704983 479 IPFWAE--- 484 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
20090964 449 VNLENRELN 457 Methanosarcina acetivorans C2A
20091201 459 ISGELKKQI 467 Methanosarcina acetivorans C2A
20091202 446 ILSGAGGEK 454 Methanosarcina acetivorans C2A
20091244 506 VLRENISDS 514 Methanosarcina acetivorans C2A
14521387     ---------     Pyrococcus abyssi
14521706 426 VRA------ 428 Pyrococcus abyssi
13357594 459 IKTNQ---- 463 Ureaplasma urealyticum
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