5DUD


Conserved Protein Domain Family
CT_C_D
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pfam02682: CT_C_D (this model, PSSM-Id:397003 is obsolete and has been replaced by 426925)
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Carboxyltransferase domain, subdomain C and D
Urea carboxylase (UC) catalyzes a two-step, ATP- and biotin-dependent carboxylation reaction of urea. It is composed of biotin carboxylase (BC), carboxyltransferase (CT), and biotin carboxyl carrier protein (BCCP) domains. The CT domain of UC consists of four subdomains, named A, B, C and D. This domain covers the C and D subdomains of the CT domain. This domain covers the whole length of kipI (kinase A inhibitor) from Bacillus subtilis. It can also be found in S. cerevisiae urea amidolyase Dur1,2, which is a multifunctional biotin-dependent enzyme with domains for urea carboxylase and allophanate (urea carboxylate) hydrolase activity.
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Statistics
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PSSM-Id: 397003
Aligned: 98 rows
Threshold Bit Score: 168.896
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5DUD_B      5 RCYLIGETAVVLELE-PP-VTLASQKRI----WRLAQRLVD--MPNVVEAIPGMNNITVILRnPESLALDAIE-RLQRW- 74   Escherichia coli ...
Q03XI0      4 KVIFSGDTSINVVFE-NV-VSEKISNQV----LSIAKLVERqhINGLVDIIPAYREVTFVFD-PLVLDIASFKhFLEKQ- 75   Leuconostoc mesen...
Q4FMV6      4 NISNLGDAAVYCDFG-SE-VNEAINSSVidyfHHISKLIKDkkIEGITNLTPSYNKLIVSFD-LTVTNYKKIKnFIEGLt 80   Candidatus Pelagi...
Q0RVU0     14 RYSAGAEEFVLVEFDeE--MSLETNLLV----QRVVTDVESsgIDGVLDVCPANVSYLVRYD-PDVISYTVLVnDLKKA- 85   Rhodococcus josti...
BAF59367   23 LFRQAGDGFLQVEYGaVPrFNLVDSFRV----LTINNAVKAkkIKGLYETVPGLRTNLFHFD-PEALSVRDLIsAIKEE- 96   Pelotomaculum the...
Q75A67   1422 TFRQSGDRYILIEYGeNE-MDINISYRI----KQLQEMVTKnkVTGIVEMSQGIRSLLVEYN-GYTISQEDLLsVLSAY- 1494 Eremothecium goss...
Q6FJK7   1438 VYRQAGDRYILIEYGdDI-FELNLCYRI----KSLIDIISQrnTKGIKEMSQGVRSVLVEYD-GYEISQKELLkTLIAY- 1510 [Candida] glabrata
Q0BRA9    794 LLRQSGDDNLLVEFGpLE-LDLSLRFQA----HALMERLKAenLPGLLDLTPGIRSLQVHLD-PDRLPIGRMRgLLAEA- 866  Granulibacter bet...
Q02AQ1    773 VVRADGDRYLLVEYGhNV-LDLNLRFRV----HALEDQVRAlgLRGIIDITPGVRSLHIHYD-TGSLSREALLeALDAC- 845  Candidatus Soliba...
Q6D5X1    799 VARLSGDTHLLLEVGaAE-LDVALRFRV----HALMLALEQqtLDGIIDITPGIRSLQVHYR-PETLALSPLLeVLSSL- 871  Pectobacterium at...

5DUD_B     75 WEE---SEALEPESRFIEIPVVYGGAGGP---------------------DLAVVAAHCGLS-EKQVVELHSSVEYVVWF 129  Escherichia coli ...
Q03XI0     76 LNKm-dGEIVDKNGRHYDIPVLYNDEVGL---------------------DLLEVAKYHGLS-LEEVIHLHTAQAYRIYM 132  Leuconostoc mesen...
Q4FMV6     81 INR---DIKNNNQK--IKIPVCCDDEYGL---------------------DFLRLIEKLNID-KDKILELYFGKEYFCYM 133  Candidatus Pelagi...
Q0RVU0     86 EARsraKGFASFDTRIVDIPVLFNDPWTHevlmkfrd-----rvqdpdstDLEYLSRVNGFAdTEGFIDSLTSTPSLASM 160  Rhodococcus josti...
BAF59367   97 EEKlaqVEDIEFESRLILLPIAFEDSETKkavekyvrevrpdapnvingyNIEYMALCNGVT-VEDIKRMVCGTEWYNSG 175  Pelotomaculum the...
Q75A67   1495 ELEinfDVDWKVKAKLFRLPMAFEDSKTLeavrryqeti--rsdapwlpsNADFVANVNGIT-RADVRDLLYSATFMVLG 1571 Eremothecium goss...
Q6FJK7   1511 EEQlpqEKNWSVKSRIFRLPMAFEDKETLacvkryqeti--rskapwlpnNVDFVAEVNNLT-HDDIRQLIYTTRYMVLG 1587 [Candida] glabrata
Q0BRA9    867 IADlppVDQISVPTRTIHMPLSWDDESTRlairkyqelv--rpdapwcpsNIEFIRRINGLAdEQAVKDVVYNARYLVLG 944  Granulibacter bet...
Q02AQ1    846 ERQipeLDNLVAPSRTVHLPLSWDDPATQlairkymqgv--rpdapwcpsNIEFIRRINGLDsIEDVREVVFAANYLVLG 923  Candidatus Soliba...
Q6D5X1    872 WLTvcaQQNLTVPSRVVYLPLSWDDPACQlaiqkymttv--rsdapwcpsNLEFIRRINELDnLDEVYRTVFEASYLVMG 949  Pectobacterium at...

5DUD_B    130 LG-FQPGFPYLGSLPEQ---LHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTsLSLFDP-AR-DEP--IL 201  Escherichia coli ...
Q03XI0    133 LG-FLPGFAYLGGLDAK---LHTPRKNTPRLRIPAGSIAIGGEQTGYYPVDSPGGWQIIGQTpLVMFDS-NR-PEI--KL 204  Leuconostoc mesen...
Q4FMV6    134 TG-FIAGMPFLGDLNEN---IRCDRLETPRVKMPKGSVGITEQFANIYTFESPGGWNIIGNTpKKIFDDkNL-DKP--AL 206  Candidatus Pelagi...
Q0RVU0    161 TG-FVPGIVWSYQMVPKkrqLQGPKYLRPRTETPDRAFALGGAFPAIYPTPSVGGYPIFGRAaAPVYDPaQR------LP 233  Rhodococcus josti...
BAF59367  176 NG-FWPGGGFFWPLDPRc-aIVVPKYNPPRTWTPEGTVGIGGPCLYVYPTPTGGGYQLFGRT-IPIFQFaQK------HP 246  Pelotomaculum the...
Q75A67   1572 LGdVFLGAPCAVPLDPRq-rLLGTKYNPSRTYTPNGVVGIGGMYMCIYCTDSPGGYQLMGRT-IPIWNR-LQ-LGE--AW 1645 Eremothecium goss...
Q6FJK7   1588 VGdVFLGSPCAIPLDPRn-rLLGSKYNPSRTFTKRGVVGIGGSYMCIYAADSPGGYQLVGRT-IPIWDRlMLqSKKd-EP 1664 [Candida] glabrata
Q0BRA9    945 LGdVYLGAPVATPLDPRh-rLVTTKYNPARTWTPENAVGIGGAYMCIYGMEGPGGYQFVGRT-VQVWNT-HR-QTA--NF 1018 Granulibacter bet...
Q02AQ1    924 LGdVYLGAPVATPVDPRh-rLVTTKYNPARTWTPENAVGIGGAYLCVYGMEGPGGYQFVGRT-VQMWNTfRGsP-----P 996  Candidatus Soliba...
Q6D5X1    950 LGdVYLGAPVATPLDPRh-rLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRT-LQMWDRyRGvDAFdgKP 1027 Pectobacterium at...

5DUD_B    202 L 202  Escherichia coli K-12
Q03XI0    205 H 205  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Q4FMV6    207 V 207  Candidatus Pelagibacter ubique HTCC1062
Q0RVU0    234 D 234  Rhodococcus jostii RHA1
BAF59367  247 L 247  Pelotomaculum thermopropionicum SI
Q75A67   1646 K 1646 Eremothecium gossypii
Q6FJK7   1665 W 1665 [Candida] glabrata
Q0BRA9   1019 R 1019 Granulibacter bethesdensis CGDNIH1
Q02AQ1    997 W 997  Candidatus Solibacter usitatus Ellin6076
Q6D5X1   1028 W 1028 Pectobacterium atrosepticum
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