Conserved Protein Domain Family
rimM

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PRK00122: rimM 
16S rRNA-processing protein RimM; Provisional
Links
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Statistics
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PSSM-Id: 234650
Aligned: 597 rows
Threshold Bit Score: 120.633
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
158313002   8 MGEPVVVGRVGRPHGIRGDVTVDVRTDLPERRFAPGARLV--RqvadgpasrpaAdaagaadavgtaagpgsagdsgaar 85 
42519386    1 MTEYFEVGKILSPHGLKGEVKVNATTDFPEERLATGSRLFikNnkq------yeE------------------------- 49 
268319237   1 MTEYFEVGKILSPHGLKGEVKVNATTDFPEERLATGSRLFikNnkq------yeE------------------------- 49 
58337564    1 -MQYFDVARILTTHGLHGEVKVNVITDFPEDRFAEGMQLElkDdi-------drV------------------------- 47 
116514337   1 -MNYYNVGKIIATHGLKGEVKVALTTDFPEDRFRAGSRLYlgd--------dsrE------------------------- 46 
161507705   1 -MEYFDVARILTTHGLNGEVKVNVITDFPEERFAEGMHLSlrSdt-------nrT------------------------- 47 
116629444   1 MTEYFEVGKILSPHGLKGEVKVNATTDFPEERLANGSRLFikNsdq------yqE------------------------- 49 
258508636   1 MPDYYDIGTIVNTHGIRGEVRVLVTTDFPEQRFKVGNKVYvatt-------pktA------------------------- 48 
258539813   1 MPDYYDIGTIVNTHGIRGEVRVLVTTDFPEQRFKVGNKVYvatt-------pktA------------------------- 48 
295693162   1 -MEYYDVARILTTHGLNGEVKVSVITDFPEDRFAIGMHLAikge-------tsqV------------------------- 47 
158313002  86 aagppvatvLSVVASRWHSGRLLVRFDGVTDRDAAEALRGSFLTIDSDECGPAvDPDDedddgelWWDRDLVGLHArtpa 165
42519386   50 ---------LIVENTRRHKQFYLVKFEKIDDIDQAEKICSKELYVAETDQQEL-PEGS-------YYFKDILNCPV---- 108
268319237  50 ---------LIVENTRRHKQFYLVKFEKIDDIDQAEKICSKELYVAETDQQEL-PEGS-------YYFKDILNCPV---- 108
58337564   48 ---------LTIKKSRPFKQFWLLQFDEITDIDEAEKLRGKILVISEKDRGEL-PDGV-------YYYKDIFDCGV---- 106
116514337  47 ---------VTVAAGRPFKQFWLVTFAEITDIDQAEKLKGTEILISEEDQGEL-PDGV-------YYYRELLGCKV---- 105
161507705  48 ---------LTVEKSRPFKQFWLIQFKEITDIDQAEKLRGQILVVSEEDRGEL-PDGV-------YYYKDIFDCDV---- 106
116629444  50 ---------LIVDGARRHKQFYLVKFEEIDGIDQAEKVCGKELYVAETDQQEL-PEGS-------YYFKDILNCPV---- 108
258508636  49 ---------LTINSVRQHKGLTMLTFKDYTDINQVLPFKGKKLQVTEAALKPL-EEGS-------YYYKDIIGLTV---- 107
258539813  49 ---------LTINSVRQHKGLTMLTFKDYTDINQVLPFKGKKLQVTEAALKPL-EEGS-------YYYKDIIGLTV---- 107
295693162  48 ---------LTVAKSRPFKQFWLVQFAEITDIDQAEKLKGKILVVSEADRGEL-PEGV-------YYYKDIFDCDV---- 106
158313002 166 gdV-------LGEVVDVIHSPGGEILAIgRPEGGeYLVPFVREIVPTVDPAAGHIVVDPPPGL 221
42519386  109 --YdaetgekLGVLENIETPGANDIWEIkpeKGKsFWIPNIESVVKKVDLANKRIEVTLLEGL 169
268319237 109 --YdaetgekLGVLENIETPGANDIWEIkseKGKsFWIPNIESVVKKVDLANKRIEVTLLEGL 169
58337564  107 --IdnetgkrLGKITDIQSPGANDIWLVhedNGKeYWIPNIADVVKKIDIADKKVYVELMEGL 167
116514337 106 --LddesgeeIGELTDIEAPGANDIWEVtDKNGKsFWLPYIPQVVKSVDIDKKEVRVELMEGL 166
161507705 107 --IdeetgkrIGKIVDIQSPGANDIWLVredDGKeYWIPNIADVVKKVDVAAKKVYVELMEGL 167
116629444 109 --YdaetgekLGVLANIETPGANDIWEIkpeHGKsFWIPNIESVVNKVDLANKRIEVTLLEGL 169
258508636 108 --Ideh-gqtLGKVSEILSPGPNDVWVIpRPGKSeLLLPFLKSVVQTIDLEQKEAHVIVPEGL 167
258539813 108 --Ideh-gqtLGKVSEILSPGPNDVWVIpRPGKSeLLLPFLKSVVQTIDLEQKEAHVIVPEGL 167
295693162 107 --IdeesgkrLGKITDIESPGANDIWLVhEDNGKeYWIPNIASVVKKVDVANKKVYVELLEGL 167
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