Conserved Protein Domain Family
RNA14

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COG5107: RNA14 
Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
Statistics
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PSSM-Id: 227438
Aligned: 3 rows
Threshold Bit Score: 651.699
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19114215  27 NTSTVNESDVLATSTTASSgvKRKRLPNDLVgQLRDKIQENPNDISSWYALVEEYGSKGKHEELRETYEQMLRPFPYVPR 106 fission yeast
19074012   1 ------------------------------------------------------------MDAEEKMGVELSSPSAIMEH 20  Encephalitozoon cun...
1350801    1 MSSSTTPDLLYPSADKVAE--PSDNIHGDEL-RLRERIKDNPTNILSYFQLIQYLETQESYAKVREVYEQFHNTFPFYSP 77  baker's yeast
19114215 107 VWVDYISSELAFNDFHAVELLFSRCLVKVLS---VDLWTLYLSYIRRINPDGEG--QSRSTITQAYEFVIN-TIGVDILS 180 fission yeast
19074012  21 ARRLYMS-----KDYRSLESLFGRCLKKSYN---LDLWMLYIEYVRKVS-------QKKFKLYEVYEFTLG-------QF 78  Encephalitozoon cun...
1350801   78 AWTLQLKGELARDEFETVEKILAQCLSGKLEnndLSLWSTYLDYIRRKNNLITGgqEARAVIVKAFQLVMQkCAIFEPKS 157 baker's yeast
19114215 181 GPIWSEFVDFLRSGPANSTWE-QQQKLDHVRRIYQRAITTPIHNIEKLWRDYDAFENSVNRATARKFVAEKSPVYMAARA 259 fission yeast
19074012  79 ENYWDSYGLYKEYIEELGKIEdEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQ 158 Encephalitozoon cun...
1350801  158 SSFWNEYLNFLEQWKPFNKWE-EQQRIDMLREFYKKMLCVPFDNLEKMWNRYTQWEQEINSLTARKFIGELSAEYMKARS 236 baker's yeast
19114215 260 AMRELSNLTEGLRVYDFTFERKYTK--VER--IAYSR------WMNWIKWEQSDPLDLQHGTMLQnRIAYAFEQAMLYVP 329 fission yeast
19074012 159 RYQQIQPLIRGWSVKN-----------AAR----------------LIDLEMENGMKLGGRPHES-RMHFIHNYILDSFY 210 Encephalitozoon cun...
1350801  237 LYQEWLNVTNGLKRASPINLRTANKknIPQpgTSDSNiqqlqiWLNWIKWERENKLMLSEDMLSQ-RISYVYKQGIQYMI 315 baker's yeast
19114215 330 LCPQIWLDGFSYFLSISDEQRALQTIRRGMRYCPSnfvLHVRYAEHEEANNRTSEIRSTYESLIAALAREISQLDSKASS 409 fission yeast
19074012 211 YAEEVYFFYSEYLIGIGQKEKAKKVVERGIEMSDG-----MFLSLYYGLVMDEEAVYG-------DLKRKYSMGEAESAE 278 Encephalitozoon cun...
1350801  316 FSAEMWYDYSMYISENSDRQNILYTALLANPDSPS---LTFKLSECYELDNDSESVSNCFDKCTQTLLSQYKKIASDVNS 392 baker's yeast
19114215 410 SSesstDGNPqeKKLPEHLVKRKSrlvrQYSLAWCCLINAIRRTEGVKAARAIFTKARKAP-YQSHEIYIASAMMEHHCS 488 fission yeast
19074012 279 KV-------F----SKELDLLRIN------------HLNYVLKKRGLELFRKLFIELGNEG--VGPHVFIYCAFIEYYAT 333 Encephalitozoon cun...
1350801  393 GE----DNNT--EYEQELLYKQRE----KLTFVFCVYMNTMKRISGLSAARTVFGKCRKLKrILTHDVYVENAYLEFQNQ 462 baker's yeast
19114215 489 RDPVIASRIFELGMRHFGDVPAYVYKYLSYLIAINDETNARALFEKAIPRIAAD-EAKPIYQKWLDYESNYGDLNAAIAL 567 fission yeast
19074012 334 GSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFK----RLEKT---SRMWDSMIEYEFMVGSM------ 400 Encephalitozoon cun...
1350801  463 NDYKTAFKVLELGLKYFQNDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQDLtQLKEIYKKMISYESKFGNLNNVYSL 542 baker's yeast
19114215 568 SQRMAVVYPQESTQAIFLSRYGLKDDAEEEERETKEAEKIRELSVRLNGGNGFPGHVHNNreddevsiaSTSSKSNVEME 647 fission yeast
19074012 401 -ELFRELVDQK--------MDAIKADAILPPLPP------REHNVQMEGILG-RYHCFLD----------S--FNFLDLK 452 Encephalitozoon cun...
1350801  543 EKRFFERFPQENLIEVFTSRYQIQNSNLIKKLELTYMYNEEEDSY-FSSGNGDGHHGSYN---------MSSSDRKRLME 612 baker's yeast
19114215 648 DTrllpaslelANTQGASNPPTSALptvpVPLPSIITEFLDELPAPQVITgpriqpTKLIDhiIKSDIPFIRLRNANAHL 727 fission yeast
19074012 453 IR---------------DNSRL-------------LDEFMENLPKISQQN-------NVLS--N------LRVEKVISLL 489 Encephalitozoon cun...
1350801  613 ET---------GNNGNFSNKKFKRD----SELPTEVLDLLSVIPKRQYFN------TNLLD--AQKLVNFLNDQVEIPTV 671 baker's yeast
19114215 728 KRARFN 733 fission yeast
19074012 490 KSVQ-- 493 Encephalitozoon cuniculi
1350801  672 ESTKSG 677 baker's yeast
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