1J2Q,1YAU,1PMA


Conserved Protein Domain Family
proteasome_beta_archeal

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cd03764: proteasome_beta_archeal 
Click on image for an interactive view with Cn3D
Archeal proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme for non-lysosomal protein degradation in both the cytosol and the nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are both members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239733
Aligned: 20 rows
Threshold Bit Score: 273.745
Created: 28-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitebeta subunit
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #               # #             #                                               
1J2Q_N      1 TTTVGLVCKDGVVMATEKRATMGNFIaskaAKKIYQIAdRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIA 80  Archaeoglobus fulg...
AAK41063   32 TTTVGIRVNDGVILAADRRASAGFFVankmVRKVLYITdKIGITTAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIA 111 Sulfolobus solfata...
O50110     11 TTTVGIVCKDGVVLAADRRASLGNIIyarnVTKIHKIDeHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALA 90  Pyrococcus horikoshii
BAA29317    7 TTTVGIKVKDGVILAADTQASLDHMVetlnIRKIIPITdRIAITTAGSVGDVQMIARILEAEARYYYFAWGRPMTTKAMA 86  Pyrococcus horikos...
NP_614511  11 TTTVGILADKGVVLAADRRAVMGNLIagkqVKKIFRIHdYIGVTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALA 90  Methanopyrus kandl...
Q58634      7 TTTVGLICDDAVILATDKRASLGNLVadkeAKKLYKIDdYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACA 86  Methanocaldococcus...
NP_147297  32 TTTVGLIASDHVILAADKRATAGFLIasrrVKKIVMLSnYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVA 111 Aeropyrum pernix
NP_560846   9 ATAVGIKAKDGVVLAAEKRVSYGFYTlssaGKKVFVIDdKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMA 88  Pyrobaculum aeroph...
NP_341826   6 ATAVGLKVNDGIVLASERRLSYGGYVlskqAKKVYKIN-KFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAA 84  Sulfolobus solfata...
NP_147287  42 ATALGIRVEDGVVLAADKRMSYGGFIlsrnFKKIFVINdRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVA 121 Aeropyrum pernix
Feature 1                                                          #                          
1J2Q_N     81 TLTSNLLNSYry--fpYLVQLLIGGIDs-eGKSIYSIDPIGGAIEEkdIVATGSGSLTAYGVLEDRFTPEIGVDEAVELA 157 Archaeoglobus fulg...
AAK41063  112 TRLANVLSATky--fpYIVQILIGGYDd--QPRLFNLDYLGDITEEn-YVATGSGSPVAMGVLEDEYNPKMTLDEAADLA 186 Sulfolobus solfata...
O50110     91 TLLANIMNGAky--fpYLAWFLVGGYDe--KPKLYSVDMVGGITEDk-YATAGSGMEFAYSILDSEYKDNLTLEEGIKLA 165 Pyrococcus horikoshii
BAA29317   87 NLLSNILNENkw--fpYLVQIIIGGYVd--EPTIANLDPYGGLIFDn-YTATGSGTPFAIAILEEGYKENLGIEEAKELA 161 Pyrococcus horikos...
NP_614511  91 NMISHVLHSSlkafrpYLVQLIVGGFNd-dDPALYNLDPSGSIIEEd-YTATGSGSPTAYGVLEAEYEEGMSLDDAIEVA 168 Methanopyrus kandl...
Q58634     87 TLLSNILHSSrm--fpFLTQIIIGGYDlleGAKLFSLDPLGGMNEEktFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLA 164 Methanocaldococcus...
NP_147297 112 SLLSNILFSSkf--fpYIVQLIVGGYDt--QPRLYTLDLFGSITEDk-YTATGSGSPIAYGVLEERYREDLSVEEAIKVA 186 Aeropyrum pernix
NP_560846  89 RLLSVIMFSRrf--mpFFAEVLVGGIDe-eGPHLIVMDPLGSLIEDn-YAALGTGAKLAVAVLDTGYRPDITVEEAKKLA 164 Pyrobaculum aeroph...
NP_341826  85 KLLSVILYQYkv--mpFISEILFGGVDe-kGPQLYVLDPIGSLIEDn-YAAVGSGARIAIGVLESEYDPNMSLDVATQLI 160 Sulfolobus solfata...
NP_147287 122 KFLSSLLYSYkf--fpFNVEAIVGGIDpggEPKLYVLDPLGSIIEEd-YVAAGTGATTAFGLLEHVYKRGMSLEEAKKAA 198 Aeropyrum pernix
Feature 1               #  ##                   
1J2Q_N    158 VRAIYSAMKRDSASGD-GIDVVKITEDe-FYQYS 189 Archaeoglobus fulgidus
AAK41063  187 KRAVFSAIKRDSFTGT-GVIVAKIHSKg-HEELE 218 Sulfolobus solfataricus P2
O50110    166 VKAINTAIKRDVFSGD-GILVVTITKEg-YKELS 197 Pyrococcus horikoshii
BAA29317  162 IKAIKAAGSRDVYTGSkKVQVVTITKEg-MQEEF 194 Pyrococcus horikoshii OT3
NP_614511 169 VRAVKSALERDTGTGE-GVTVVTITREegYRELP 201 Methanopyrus kandleri AV19
Q58634    165 LNALKSAMERDTFSGN-GISLAVITKDg-VKIFE 196 Methanocaldococcus jannaschii
NP_147297 187 TTAIRSAVLRDAASGD-GADVVVIGPQg-YEEKF 218 Aeropyrum pernix
NP_560846 165 VQALKAAIERDPVSGG-GIDLAIVDKNg-AREEE 196 Pyrobaculum aerophilum str. IM2
NP_341826 161 TKAIKASIERDITSGD-GIDLAIIDKKgnYENKF 193 Sulfolobus solfataricus
NP_147287 199 VEALRASMARDAGTGD-GIDVLVLPVSg-KPSLE 230 Aeropyrum pernix

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