Conserved Protein Domain Family
PRK13729

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PRK13729: PRK13729 
conjugal transfer pilus assembly protein TraB; Provisional
Statistics
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PSSM-Id: 184281
Aligned: 49 rows
Threshold Bit Score: 624.924
Created: 9-Dec-2010
Updated: 17-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
9507791     1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGeTVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQ 80 
145301412   1 MANINAITKRKQIMLASSVALIVVAGGAGGWYLSTMD-QRNAaKAAQSEPAPDMTGVVNAQFDDKVQQSAVTEFQLINKE 79 
152973566   1 MANFNTLIKRKQYIWLGLILAGGAAAVGGGLYLSDLNMSSDEeAPAQGEPAPDMTGVVDSSFNSKVEQHATTEMQATAAD 80 
146284613   4 NENLKT--RRTQLAVLATVIAVGAATAGGVMWYGNHQEQQKHpAPVA---APNMTGVVTASFNEQVNDAALAQQQAKTSA 78 
209916891   1 MANVNQLVRRKQNLRMAVIALGISAVGAGAWYMSTVKSSGKAaQTQQKAPPPNMTGVVSQTFDKKVSDAAVADIQHTASE 80 
291288992   1 MANFNTLIKRKQYIWLGLILAGGAAAVGGGLYLSDLNMSSDEeAPAQGEPAPDMTGVVDSSFNSKVEQHATTEMQATAAD 80 
294496775   1 MANFNTLIKRKQYIWLGLILAGGAAAVGGGLYLSDLNMSSDEeAPAQGEPAPDMTGVVDSSFNSKVEQHATTEMQATAAD 80 
295697989   4 NKNLKT--RRKQLAILAAVITGGAAATSGVIWYGQHQQEQKQpAPVA---TPNMTGVVTAAFNQQVNDAALAQQQAKTSA 78 
300713324   1 MSNINTATRRRQWMVAGVTLAVAAATGGGIWWYAQHQAALKNpPPAPK--AADMTGLVTTKFTDSVASSVLTQQQNKTAG 78 
300837053   1 MANFNTLIKRKQYIWLGLILAGGAAAVGGGLYLSDLNMSSDEeAPAQGEPAPDMTGVVDSSFNSKVEQHATTEMQATAAD 80 
9507791    81 MQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV-K----ALGAN--PVTATGEPVPQMPASPP-----GPEGE 148
145301412  80 VRQQLAAMRTEMAMMSRERKNDQERLASLEAENKEL-KAA-T----ASGPS--LQAPTGEPAPSSANPAQ-----MANGN 146
152973566  81 LNKRFDSLQGEVDLLSKARSADQIRIDKLSSDNEAMQNQL-K----ALGVK--PAVSGGEPAPTPPSPPP-----GPEGE 148
146284613  79 LEQQYATLAQ---LVAQNKLTTEQKLAEKDAEIQRLTDQVqK----APGSN----TTTGQQSP-----PA-----GQNGT 137
209916891  81 AEKKLKAFESRLAKMEQREQDYRAKIEEQENELAILRAEQ-E----AMKENggPELPAGQPVPSFGTGS----------- 144
291288992  81 LNKRFDSLQGEVDLLSKARTADQIRIDKLSSDNEAMQTQL-K----ALGVK--PAVSGGEPAPTPPSPPP-----GPEGE 148
294496775  81 LNKRFDSLQGEVDLLSKARTADQIRIDKLSSDNEAMQNQL-K----ALGVK--PAVSGGEPAPTPPSPPP-----GPEGE 148
295697989  79 LEDRLATLTQQ---FAQNKLTTEQQLAKKDEEIQRLNDQLtK----APGSK----TTTGQQTP-----PA-----GQNGT 137
300713324  79 LETSVSQLKADVQ---RQKDDMSQKLERLDTLISKLQGQAdKqppvAPGST--SPAAGPGPVPGGPAGPAqwnitDPNRG 153
300837053  81 LNKRFDSLQGEVELLSKARTADQIRIDKLSSDNEAMQNQL-K----SLGVK--PAVSGGEPAPTPPSPPP-----GPEGE 148
9507791   149 PQPGNTPV--SFPPQGsvAVPPP-----------TAFYP----GNGVTPPPQVTYQ---SVPVPNR-IQRKVFTRN-EGK 206
145301412 147 -------------------IPPP-----------TAFYP----GMGNVQPGQMTIQpmaPVQPVNA-IDSTTFSYD-DDQ 190
152973566 149 PQ----PA--SYPPQTgaAVPPP-----------TAFYP----GNGMTPPPQVSYQ---SVPVPNQ-IQRKTFSYD-KGK 202
146284613 138 PLPGPVAAgqARPPEYsvTPNAPaatgv-nmgqgAGFYP----GGS-------------GQRLTGG-LSTTKFSYDsLKK 198
209916891 145 ------------------SVPPP-----------TAFYQpgggGEANNLAPVTQYQ---VTPQPKKgLSSMTVDYGeKSA 192
291288992 149 PQ----PA--SYPPQTgaAVPPP-----------TAFYP----GNGMTPPPQVSYQ---SVPVPNQ-IQRKTFSYD-KGK 202
294496775 149 PQ----PA--SYPPQTgaAVPPP-----------TAFYP----GNGMTPPPQVSYQ---SVPVPNQ-IQRKTFSYD-KGK 202
295697989 138 PLPGPVAAgqARPPEYtvTPAGTpaatgvnmgqgAAFYP----GGS-------------GQRMTGG-LSTTKFSYEsLKK 199
300713324 154 PAAGQGSQ--FYPGQGagQG--------------QGFYP----GAGTGRTGG---------------MTSRTFTYAsLQH 198
300837053 149 PQ----PA--SYPPQTgaAVPPP-----------TAFYP----GNGMTPPPQVSYQ---SVPVPNQ-IQRKTFSYD-KGK 202
9507791   207 --QGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284
145301412 191 psQAPRYPYIPSGSFAKAVVIEGADTNAAVTGQQNTSPMQLRLTGKVQMPNDHEYDLTGCFVTLEAWGDVSSERAIVRTR 270
152973566 203 --KAKSLPYIPSGSFAKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSERAIVRTR 280
146284613 199 --KPTKLPWIPSGSFSDAVMIEGADANASVTGQQNTSPVTLRLQGNIQMPNNKEYSADGCFIVGEIWGDISSERGTVRTQ 276
209916891 193 vsDKPLLPYIPSASFAPAVVIEGADANASVTGNSDPSPMQFRLTGLVRMPNDKTYDLTGCMVTAGAYGDISSERALIRTD 272
291288992 203 --KTKSLPYIPSGSFAKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSERAIVRTR 280
294496775 203 --KTKSLPYIPSGSFAKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSERAIVRTR 280
295697989 200 --KPTKLPWIPSGSFSDAIMIEGADANASVTGQQNTQPVTIRLLGNIQMPNNKEYSADGCFVVGEIWGDISSERGIVRTK 277
300713324 199 --KKTTLPWISSGSFSEAVMIEGADANASVTGQQNTSPVVITLLGDVSMPNGRTWNMDQCRVTGEIYGDISSERGEVRTK 276
300837053 203 --KTKSLPYIPSGSFAKSMLIEGADANASVTGNESTVPMQLRITGRVEMPNSKTYDLTGCFVGLEAWGDVSSERAIVRTR 280
9507791   285 NISC-LKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKM 363
145301412 271 GISC-KKSNDVIDQKIAGHVSFMGKNGIKGEVIMRNGQILGWAWGAGFIDGVGKGIEKSASPQVGIGATATMNGGDIAKA 349
152973566 281 NISC-IKGDKTIDQPINGHVSFMGKNGVKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATASVGAGDVLKM 359
146284613 277 SISCvLKNGKHVDMEFQGHVSYQGKNGIRGKPVMRNGMIVGYAGAAGMLSGFGEGIKSAATPSVGLGATADVGAGDVFKQ 356
209916891 273 RLSC-HKNGHVIDMPFKGHVSFKGKNGIKGEPVMRNGKIIGWAFAAGAVDGIGSGVAKIGQETPGAGAVASVSGSTVMNG 351
291288992 281 NISC-IKGDKTIDQPINGHVSFMGKNGVKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATASVGAGDVLKM 359
294496775 281 NISC-IKGDKTIDQPINGHISFMGKNGVKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATASVGAGDVLKM 359
295697989 278 SLSCvLKNGKHVDMEFDGHVSYQGKGGVRGKPVMRNGMIVGYAGAAGLLSGFGEGIKSAATPSVGLGATADVGAADVFKQ 357
300713324 277 NISCiLKNGKHIDMPFDGHVAYQGKQGIRGKPVMRNGKIIGYAGAAGLLSGFGEGIQSAATPSVGLGATASVGAGDILKQ 356
300837053 281 NISC-IKGDKTIDQPINGHVSFMGKNGVKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATASVGAGDVLKM 359
9507791   364 GIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEE-----DNPESPVPVPPS 438
145301412 350 GIGGGAGQAAKTLSDYYIKRAEQYHPIIPIGAGNEVTMVFQDGFQLETIAEAALKKAN-------------KAPVPQQDD 416
152973566 360 GVGGGASKAAQTLSEYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQ-----NQEAEPAPQADA 434
146284613 357 GFGGGANKAADTLSQYWIKRAEQYHPVIDIGAGNQVTVVFQKGFRLETLEDAEDAKAKEELQKagnaaQNAVSPQPASQS 436
209916891 352 ALGGGASQVGKTLSDYYIKRAEQYHPVIPVGAGTEVTVVFQEGFQLKYTDE-------------------DKASTPARQA 412
291288992 360 GVGGGASKAAQTLSEYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQ-----NQEAEPAPQADA 434
294496775 360 GVGGGASKAAQTLSEYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQ-----NQEAGPAPQADA 434
295697989 358 GFGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNLVTVVFQKGFRLETIEDADDAKAKEELQKagnaaQNAVTPQPASQT 437
300713324 357 GIGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNAVTVVFQQGFRLETIEDVEAEKAVKDAPQ-----ATAQQAAAAVTN 431
300837053 360 GVGGGASKAAQTLSEYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTIEELEAEKNGQQQAQ-----NQEAEPAQQADA 434
9507791   439 ---AESHLNGFNTDQMLKQLGNLNPQQFMSGSQG--GGNDGK 475
145301412 417 vlaDPTVTRSFKD----MKVGDLVDPPLHQ------------ 442
152973566 435 hhqSGGGMNGFNTDEMLKKLGKLDPREFSPGAAP--QGENNG 474
146284613 437 ttsGTASVGNINPDDVLRQASQLRLGDTIN------------ 466
209916891 413 ---KAVVDNGIQVSQQM--LRELNLGDAVPQSAGqsGGQQQ- 448
291288992 435 hhqSGGGMNGFNTDEMLKKLGKLDPREFSPGAAP--QGENNG 474
294496775 435 hhqSGGGMNGFNTDEMLKKLGKLDPREFSPGAAP--QGENNG 474
295697989 438 tasSTTSVGNINPDDVLRQASQLRLGDTIN------------ 467
300713324 432 sgdNITRAPVLNPDEVLRQASQLKLGDTIN------------ 461
300837053 435 hhqSGGGMNGFNTDEMLKKLGKLDPREFSPGAAP--QGENNG 474
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