5HDK,5D5W,1HKS


Conserved Protein Domain Family
HSF_DNA-bind

?
pfam00447: HSF_DNA-bind (this model, PSSM-Id:395358 is obsolete and has been replaced by 459813)
HSF-type DNA-binding
Statistics
?
PSSM-Id: 395358
Aligned: 374 rows
Threshold Bit Score: 71.0689
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5HDK_A        10 FLSKLWTLV-----EET---HTNEF--------ITWSQNGQSFLVLDEQRFAKeILPKYFKHNNMASFVRQLNMYGFRK- 72 
XP_002293508  39 FPRKLMDML-----TKE----DSAV--------VSWLPTGDAFMVRDNERFVGdILPRYFRHTKLTSFQRQLNLYGFRR- 100 Thalassiosira p...
XP_002185590 254 FPQKLFRLL-----N--------EAerlgfdhiISFMPSGKSFCIHQPHQFIKeVAPNYFRHSKLSSFTRQLQLYHFSRt 320 Phaeodactylum t...
EEC45482     264 FPQKLHQML-----TDLe-qQGSDV--------ASFSSHGRSFSIHKPKEFVRdVMPKYCRMSRYTSFQRQLALYNIRR- 328 Phaeodactylum t...
XP_002182798 195 FPEKLHEML-----DSEtspAAQAV--------VSWLPHGRAFVVRKPKEFTSkIMPTYFRQTKLTSFQRQLNLYGFRR- 260 Phaeodactylum t...
XP_002294356 443 FPEKLMDML------DKeslLHVDI--------ISWCPHGRAFIVKKPKEFTSkLMEKYFRQSKLTSFQRQLNLYGFRR- 507 Thalassiosira p...
EED89258      50 FPMKLHFLLnraedD--------GFdd-----iISWLPHGRSFVVKQPIDFIKtILPQYFRMTKMTSFTQQLSMYGFVRi 116 Thalassiosira p...
XP_002184404 101 FPEKLHEML-----ATTdadDFSDV--------ISWQPHGRCFLIHRKRDFVEdIMPRFFHQTKLTSFQRQLNLYGFIR- 166 Phaeodactylum t...
EED93776     112 FPQKLMEVL-----SNN---EISGI--------ITWLPHGRGFIILQKRKFASdVMPQYFKHSKFTSFTRKLNRWGFNR- 174 Thalassiosira p...
XP_002292072 106 FPAKLHKMLsapeyS--------RI--------ITWMPHGRAWKILDKDRLVDeVIPKYFVQTKYESFTRQLSGWGFKRl 169 Thalassiosira p...
5HDK_A        73 ------VVHIDSgi--vKQERD-GPV--EFQHPYFKQGQDDLLENIKRK 110
XP_002293508 101 ------ITKGP--------DQG------AYRHEWFLRDQPDLCIQMKRS 129 Thalassiosira pseudonana CCMP1335
XP_002185590 321 vegasvDC---------------------YVHIDFQKGHPELLYKIRRA 348 Phaeodactylum tricornutum CCAP 1055/1
EEC45482     329 ------ITEGP--------NKG------SYCHELFVRGRPILATMINRN 357 Phaeodactylum tricornutum CCAP 1055/1
XP_002182798 261 ------ITQGA--------DAG------AYYHELFLRGRPSLSQRMVRQ 289 Phaeodactylum tricornutum CCAP 1055/1
XP_002294356 508 ------ITQGI--------DSG------AYYHELFLKDRRHLCTRMVRQ 536 Thalassiosira pseudonana CCMP1335
EED89258     117 gigqgqGQ---------------GVAcqEFFHEYFLRHRLFLCDKIIRS 150 Thalassiosira pseudonana CCMP1335
XP_002184404 167 ------LTAGRDrggplSLSFLlAAP--SYYHELFLQGRPDLAKQIVRT 207 Phaeodactylum tricornutum CCAP 1055/1
EED93776     175 ------IARGP--------ETG------AYYHKYFRRGNHLLCMQMQCN 203 Thalassiosira pseudonana CCMP1335
XP_002292072 170 hqsgpdFR--------------------CYYHECFLRGLPHLTCMMKRS 198 Thalassiosira pseudonana CCMP1335
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap