3BFJ,3OWO,4FR2


Conserved Protein Domain Family
PDDH

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cd08188: PDDH 
Click on image for an interactive view with Cn3D
1,3-Propanediol (1,3-PD) dehydrogenase
This family includes 1,3-propanediol (1,3-PD) dehydrogenase, a key enzyme in the microbial production of 1,3-PD that has been previously characterized as the product of dhaT gene in Klebsiella pneumoniae. 1,3-PD dehydrogenase is a member of the family III metal-dependent polyol dehydrogenases, which are shown to require a divalent metal ion for catalysis. However, some members of this family showed a dependence on Fe(2+) or Zn(2+) for activity.
Statistics
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PSSM-Id: 341467
Aligned: 67 rows
Threshold Bit Score: 505.511
Created: 29-Jul-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative activemetal binding
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        #                                            
3BFJ_A      6 FDYLVPNVNFFGPNaiSVVGERCqLLGGKKALLVTDKGLraikdGAVDKTLHYLreaGIEVAIFDgvepNPKDTNVRDGL 85  Klebsiella pneumoniae
P31005      2 TNFFIPPASVIGRGavKEVGTRLkQIGAKKALIVTDAFLhs--tGLSEEVAKNIreaGLDVAIFPkaqpDPADTQVHEGV 79  Bacillus methanolicus
AGB19700    5 KLFTMPFVTLIGKDslLDLGNKLsKISGKRALIVTDKFMiq--aGFAEKVQKILdeyNIKNTIFDgvvpNPNVNAIKNAV 82  Thermoanaerobacter...
KJJ71336    6 KQFFMPRESLFGRGcsRKIGQYLsQRNLCSALVVTDTHLve--cGVVNRVTVPLeeyGISFELFDqvspNPTLTNVREGA 83  Clostridium sp. FS41
EHF00855    6 KQFFMPRESLFGRGcsRKIGQYLsQRNLCSALVVTDTHLve--cGVVNRVTVPLeeyGISFELFDqvspNPTLTNVREGA 83  [Clostridium] citr...
OTP31703    2 YELIMPPINRFGENcvSTIGLLAaEIKLKKALIVTDHNLvk--lGVINSVLKSLeteSIAYSIFDevkpNPTKENVLKGI 79  Enterococcus sp. 6...
SCG95391    5 SIFHLPNRSLFGAGclKEIGRQAaGFNIKRFLLVTDNFLak--sKACRRIHDLLkneQIEITLFDktspNPTLQNVYDAH 82  uncultured Clostri...
SHK02769    2 INLLSPSKNYLGKNciEYLNAELsGNRFRRCLIITDSFLvk--sPTYKRVLKVLsnnTIGYKTYDqtmpNPTVQCVDKAY 79  Clostridium camini...
EHR35058    1 MEFVLPAINKFGKDsyQEISNTLlKENKKKGLIITTKDIye--lGLLKDILNILeenQIQYEMYTgvvpNPTINNVEDSS 78  Helcococcus kunzii...
ENY97205    4 FKYQSPERALFGFGsvQGIQDEIrSRKLTKALLVTGRDLad--tAIVKNVIHALeaaDTGYALFTdfkpNPTTNNVNQGS 81  Hungatella hathewa...
Feature 1                    ###  #  #                                ## #                  ##
3BFJ_A     86 AVFrreqCDIIVTVGGGSPHDCGKGIGiaatheGDLYQYAGIetltnplpPIVAVNTTAGTASEVTRHCVLTNtetkVKF 165 Klebsiella pneumoniae
P31005     80 DVFkqenCDALVSIGGGSSHDTAKAIGlvaangGRINDYQGVnsvekpvvPVVAITTTAGTGSETTSLAVITDsarkVKM 159 Bacillus methanolicus
AGB19700   83 KCFisneCDTLISLGGGSAHDTAKGVKlvllgnDELYRDKNI--------KLVCVNTTAGTGSEVTRFCVITDelehRKI 154 Thermoanaerobacter...
KJJ71336   84 EYYqkkgCDCIIAVGGGSPIDCGKAMGvwlggkGELRDYIGLercakdsvPLIAVNTTAGTASEISRACLIIDesqgRKI 163 Clostridium sp. FS41
EHF00855   84 EYYqkkgCDCIIAVGGGSPIDCGKAMGvwlggkGELRDYIGLercakdsvPLIAVNTTAGTASEISRACLIIDesqgRKI 163 [Clostridium] citr...
OTP31703   80 EVYqnnkCDFIIGIGGGSSNDCAKAIGmmvsngGVLEDYIGFnqsknessKLFMVNTTAGTASEISRSFLISDetkqEKL 159 Enterococcus sp. 6...
SCG95391   83 NLFvktnCGGVISLGGGSSHDCAKAVSilatnsAPLEQYEGVdkfphkgsPLITINTTAGTASEITNCFIITNtatnTKL 162 uncultured Clostri...
SHK02769   80 SLIsandCDFLISIGGGSAHDLAKAVGikatskGNIRDYAGVdkipneilPLICINTTSGTGSEVTRFTIITDtkeqKKM 159 Clostridium camini...
EHR35058   79 KLFldnkCDFIMGVGGGSANDCAKAVGilvsngGNIKEYVGFnksrhkspFLICVNTTAGTASEISRAFLINDeenkEKL 158 Helcococcus kunzii...
ENY97205   82 DAFirnqCDFLISVGGGSAHDCAKAISvvaaggGKIEDYTGAdkss-rayPLIAVTTTAGTGSECTSDYVVVDeaqnRKY 160 Hungatella hathewa...
Feature 1                      #       #      #   #                                           
3BFJ_A    166 VIVSWRNLPSVSINDPLLMIgkPAALTAATGMDALTHAVEAYISkdanPVTDAAAMQAIRLIARNLrqavalgsnlqARE 245 Klebsiella pneumoniae
P31005    160 PVIDEKITPTVAIVDPELMVkkPAGLTIATGMDALSHAIEAYVAkgatPVTDAFAIQAMKLINEYLpkavangedieARE 239 Bacillus methanolicus
AGB19700  155 TIVDEKVIPDIAVDDPLLMIglPPKLTAETGMDALTHAIEAYTSvdhyVLSDILALKAISLICDNLyecysnggniyARE 234 Thermoanaerobacter...
KJJ71336  164 AIKDKHAIPLLAVNDSELMVslPPGLTASTGMDALTHAVESYTSteayPVTRASALEAVRLILEHLekacsspdsyeHRD 243 Clostridium sp. FS41
EHF00855  164 AIKDKHAIPLLAVNDSELMVslPPGLTASTGMDALTHAVESYTSteayPVTRASALEAVRLILEHLekacsspdsyeHRD 243 [Clostridium] citr...
OTP31703  160 IFKDIHTLPYASFNDPNLMVnlPQAITASTGMDALTHAIESYIStgkyPLTQKMSLASIEFIFTSLeevikdpqnimLRE 239 Enterococcus sp. 6...
SCG95391  163 IFEGVNALADIAVNDPELMLslPAGLTASTGMDALTHAVECYVStlsfKLTNDLALLAVRYIFQNLstavqnpddlnARE 242 uncultured Clostri...
SHK02769  160 SIIDNKLIPWISINDTDSLMtmPKGLTGATGMDALTHAIEAYLStdsnTLTDTYALKAIDLINKNLitayrdgsniaARE 239 Clostridium camini...
EHR35058  159 IFKDINALPDLSINNPEIMFglPKKITAQTGMDALTHAIESYIStgayTLTKEFSLSAIKLIFNSLekvidepknenLRN 238 Helcococcus kunzii...
ENY97205  161 GNSDRNVLPVLAVDDYELMMnmPASLTAGTGMDALTHAVEAYCSidgaLITSELAAAAVRLIFEHLepavi-spdrkSRE 239 Hungatella hathewa...
Feature 1                          #   #         #                                            
3BFJ_A    246 YMAYASLLAGMAFNNANLGYVHAMAHQLGGlYDMPHGVANAVLLPHVARYNLian--peKFADIAELMGenitgls-tld 322 Klebsiella pneumoniae
P31005    240 AMAYAQYMAGVAFNNGGLGLVHSISHQVGGvYKLQHGICNSVNMPHVCAFNLiak--teRFAHIAELLGenvsgls-taa 316 Bacillus methanolicus
AGB19700  235 QMVYAEYLAGVAFSNVGVGLVHAMSHQLSGlYNLPHGLCNAVLLPYVMEYNLdvn--ckRYADIERNIKknicniaadet 312 Thermoanaerobacter...
KJJ71336  244 NLIYAEFLAGISFCNSGLGLVHAMSHQLSAtYGLAHGLCNAILLPYVMEFNRnic--pgLYDNLWHRVSekapencsegm 321 Clostridium sp. FS41
EHF00855  244 NLIYAEFLAGISFCNSGLGLVHAMSHQLSAtYGLAHGLCNAILLPYVMEFNRnic--pgLYDNLWHRVSekapencsegm 321 [Clostridium] citr...
OTP31703  240 QMIYAQTLAGMSFCNSGLGLVHCMAHQLGGvYNLPHGLCNAILLPFVMEFNQqva--nsGFSEIAHKLWpfetekmdvnd 317 Enterococcus sp. 6...
SCG95391  243 NMIYGEYIAGMAFGNGGVGIVHAIAHALGGiYDLPHGLCNAILLPHVIRYNTqic--aaRYADLYTVIApakskgmsana 320 uncultured Clostri...
SHK02769  240 NMAKAQFMAGIAFSNASLGYVHAIAHQLGGlYNLPHGVCNAVLLPIVLEQLGsrl-egeELGDIANAMGisvfqkk-nky 317 Clostridium camini...
EHR35058  239 EMIYAQFLAGMAFCNAGLGLVHAMSHQLSAlYNLPHGLSNAILLPEVMRLNKkts--tkGFAEIYQNIFldsfedd--ek 314 Helcococcus kunzii...
ENY97205  240 GMAVAQFLAGLAFGNAGCGLIHSMSHQLSAvYDLPHGLCNAILMPEGSRANRkapeaeeRYAALCEAVFpiesrdmttge 319 Hungatella hathewa...
Feature 1                                                                   
3BFJ_A    323 aaekAIAAITRLSMDIGIPQHLrdlGVKETDFPYMAEMALKdgnAFSNPRKgnEQEIAAIFR 384 Klebsiella pneumoniae
P31005    317 aaerAIVALERYNKNFGIPSGYaemGVKEEDIELLAKNAFEdvcTQSNPRVatVQDIAQIIK 378 Bacillus methanolicus
AGB19700  313 aadnLICDIMELNRKLGIPSNIknlNVRESDFELLADMALVdntLKTNAKKpsKKDIIEIYR 374 Thermoanaerobacterium thermosaccharo...
KJJ71336  322 asdkMISHIRGMSERIGTARKLrelGVAQKEFSNMAQKALIdgcYQTTPVKadREMITAIYE 383 Clostridium sp. FS41
EHF00855  322 asdkMISHIRGMSERIGTARKLrelGVAQKEFSNMAQKALIdgcYRTTPVKadREMITTIYE 383 [Clostridium] citroniae WAL-17108
OTP31703  318 ssgyLIQKVNELSEKIGTKVSLkdlGVKEEDIPLLADKTLLdgnLPRNPIQptKQEVEELFR 379 Enterococcus sp. 6C8_DIV0013
SCG95391  321 aceaFVAEVENLSHTIGTDRPLhtlGVQKEDFDKIAAKALLdscCETNPIFpkKEDIIQILN 382 uncultured Clostridium sp.
SHK02769  318 icprVILRILDMNKKLNIPTNLtelGVKKEDISKICTMALNdacRLTSPIQftYEELVYMLN 379 Clostridium caminithermale DSM 15212
EHR35058  315 sadlLIERVENLSDKVGTKVKLsdlGVLEEDIDKLIDMTFKdgnLPRNPYQptKEDVKNIFK 376 Helcococcus kunzii ATCC 51366
ENY97205  320 radyLIERIENLSEAVGTKRKLselGVKLEDLSLLADKTLLdasLRHNIYKpdKEEIETIFR 381 Hungatella hathewayi 12489931

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