4GQV,4ESY


Conserved Protein Domain Family
CBS_pair_BON_assoc

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cd04586: CBS_pair_BON_assoc 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain.
This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341362
Aligned: 274 rows
Threshold Bit Score: 118.686
Created: 10-Oct-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 33 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
4GQV_A     13 KKEDLHVVKPTtTVDEALELLVENRITGFPVIDedWKLVGLVSDYDLLALdsisgsgrtensmfpevd-----stwktfn 87  thale cress
Q58821     20 IMKKPIVVYEDnDLIDVIRLFRKNKISGAPVLNkdGKLVGIISESDIVKTivthnedlnlilpspldlielplktalkie 99  Methanocaldococcus...
ADI36994    6 IMKKPITIKQDdEIYDLIKLLRTHKISGVPVLDadNYLVGMVSESDVIRAlvvqdsdinliapspldlvelplktifkmd 85  Methanococcus volt...
ETA68637    7 MNTEVVTCSPDtSIREVAQLLKKEKISGLPVVDd-GKVVGIVSEGDILALlevpehgglwlpspfeviev-pirellnwe 84  Methanolobus tinda...
AFV23374    7 MNPDVVVCSPEdTIGDVARLLKQNNISGLPVVDg-GKVVGIVSEGDLLKLlevpdrtglwlpsplevfev-pirelinwe 84  Methanolobus psych...
AAM06926    8 MNPDVVFCKPDdTVREAAKLLKENNISGAPVLEd-GQLVGVVSEADLLELlvipekgnlwlpspfeviev-pirellswe 85  Methanosarcina ace...
AEH60684    7 MNSNVIYCKPDdRISDVAQLLRKNEISGMPVVEs-EKLIGLISELDLLQLleipkhgtywlpspfeviei-pireliswe 84  Methanosalsum zhil...
ADI73712    7 MNSDVIYSKSSdSIRSTAQILKKNGISGVPVVDdkNNIVGVISEEDLLRFleipdhrglwlpspfeviei-pirefvswe 85  Methanohalobium ev...
ABK14281    7 MNRNPVSCQASdPIAEAARLLRENRISGMPVLDg-DELVGVISESDLLRLlsteddrgglwlpspfeifeipvrdvirwe 85  Methanosaeta therm...
AAB85149    8 MQSDVITVKRTsSIHDAARVLRENRISGAPVVDedGKLVGIISEGDIMRLievhspslnlimpspldllelplrmkheyd 87  Methanothermobacte...
Feature 1                           ####  ###########     ######   ####### ##### 
4GQV_A     88 avqkllsktnGKLVGDLMTPAPLVVEeKTNLEDAAKILLETKYRRLPVVDsdGKLVGIITRGNVVRA 154 thale cress
Q58821    100 efmedlknalKTKVRDVMTRKVIVAKpDMTINDAAKLMVKNNIKRLPVVDdeGNLIGIVTRGDLIEA 166 Methanocaldococcus jannaschii D...
ADI36994   86 eyrkeinealKTKVSEIMTTEVIYITlDSSISDAATIMADKKINRLPVVNn-GVLEGIITRGDLMEE 151 Methanococcus voltae A3
ETA68637   85 etkdmledfgSKPIREIMTKSVYAVGpDTYIEDASTILSKHKINRLPVVDgdGTLVGIVTRGDIIAG 151 Methanolobus tindarius DSM 2278
AFV23374   85 etkrmlddvgSKSVEEIMNKKVHTVSpEDSIEKASALITKHKINRLPVMEg-GLMVGIVTRGDIIRG 150 Methanolobus psychrophilus R15
AAM06926   86 etkkmlsdvgSTKVEEMMTKEVHTISsEASVEEASELMVRHRINRLPVMEn-DRVVGIVTRGDIIEG 151 Methanosarcina acetivorans C2A
AEH60684   85 eakrmltnigTKPVKEIMRTKIYTVSpEDSIEEASTIMIKNKINRLPVVSe-GKLVGIVTRGDIIKG 150 Methanosalsum zhilinae DSM 4017
ADI73712   86 etkhmlsdfgDKKVQQVMKTDVLTITpEDTIEYASQLMTKHKINRLPVIEd-GKLIGIVTRGDIIEG 151 Methanohalobium evestigatum Z-7303
ABK14281   86 rmkrsldeitKMRVADVMSRKPITVSpDASIEEAAAIMTKHRINRLPVVEg-SRLVGIVTRGDIISG 151 Methanosaeta thermophila PT
AAB85149   88 eiargirkaaVMRVEEIMTPKVVTVPpHASVSDAAELMERHDIKRLPVIDenGRLAGIITRGDIIGA 154 Methanothermobacter thermautotr...

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