Conserved Protein Domain Family
major_cap_HK97

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TIGR01554: major_cap_HK97 
phage major capsid protein, HK97 family
This model family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 273690
Aligned: 151 rows
Threshold Bit Score: 141.714
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_00960168    4 INDLRQARSAAATAMKaaaakltelDEADTPDEAAIATAQGef------dtAEADFKKADGALRRAESVeaa----qaAA 73  Roseovarius nub...
ZP_05360474    6 LEQLAQEFKKQVDEVK---------GIAEDFKGKREHGDKIaegakqtadeAIAKLNELKSRVDEVEQK---------AA 67  Acinetobacter r...
ZP_02359374   19 DSHPEQVLETVTKELK---------RIGDEVKSAGEKALAEakkagdlgaeTKATVDELLIKQGELQARlleaeqklaRS 89  Burkholderia ok...
ZP_06193530    1 MSEVNEILKKVTASIE---------DATSKFNAKAEDALKEakksgelsaeTKDAVDKMATELNAMKAAekt---lksAL 68  Serratia odorif...
ZP_04528075    5 LKNLLAQLNGLRDEAR---------SLNEAGKVDEAEA-------------KLEEMRALKKQIDVTQAL---------ED 53  Clostridium but...
ZP_02994786    3 LEELRAQLEAKKVEIR---------EFIKDKKVAEAEK-------------AMEEKRGLEKLIKAAEEL---------EE 51  Clostridium spo...
WP_012367785   4 laiIQEAIEGSQKKVQ---------ELFDAQK-KEIEATGVvs------kqLQTDLALVQEELKKAGER---------LF 58  Proteus mirabilis
WP_011444310  62 agegegELKQLAVDLK---------SATDQVKTFAEKADAEmkrlgtvteeTKKSADEALIKMNETTAR---------ID 123 Novosphingobium...
WP_011590785  14 kKDLEERRKVIVEEIR---------SLAKEEKEEEIRSKAIer------ekIEARMEIIEEEIESVMEA---------IE 69  Clostridium per...
WP_011789763   3 NPNFEKQVEELGANLT---------KIGDQIKSAAEETNKQikasgemhaeTRDKVDKLLLEQGALQAR---------LQ 64  Shewanella sp. ...
ZP_00960168   74 ARGGDEATGGGTSSPITAAARPQS--EAD-KamgvgfivgalAIHKGDRAGAAGyldqeghsgiS-----AVLSGATAs- 144 Roseovarius nub...
ZP_05360474   68 RRQHEGGDEVKSLGRQFVESDQFK--Slvg----------saGQRGKANMEVKA----------T-----ITLATADAag 120 Acinetobacter r...
ZP_02359374   90 GGSAEPEVPKTLGQLVTESEEMKG--MDG-Sar--------kSVRVRVDRKSIM----------N-----VPATVGAGv- 142 Burkholderia ok...
ZP_06193530   69 GELEQHVAQMPLSSAAAVIQSVGQ--QVI-Sasalk--dfasGIQGNQRLSIPV----------N-----AALISTDV-- 126 Serratia odorif...
ZP_04528075   54 EEIEDLENQRDESRSRERKKTVVN--EMR-Sit--------kHIMGEDMTPEER------------------AVIKTS-- 102 Clostridium but...
ZP_02994786   52 EEKRELENQRKKKTQPEENNEfra----------------ivKTVMGEETTTEE-----------------RANIKSV-- 96  Clostridium spo...
WP_012367785  59 DLEQKGATSADDPNAKKDFSERAA--EAL-Tk---------sWNGSQASYEVKT----------F-----NKSLGSDAs- 110 Proteus mirabilis
WP_011444310 124 AIEQKLARRGEEGEKRRAKTAGQEvtESE-Efk--------aWLGGNRKNTFSM----------QvkaiiSSLTTDADg- 183 Novosphingobium...
WP_011590785  70 EERSNSNFSGGRVLGGEGSKEEKR--SLQlSam--------sKVVRGISLSEEE----------R-----DVMSAT---- 120 Clostridium per...
WP_011789763  65 EAEQKLLKGPQSQQEERELSIGER--VAT-Dkeme----gvnSSFRGTRRVQMP----------R-----SAITSATG-- 120 Shewanella sp. ...
ZP_00960168  145 AGGV-TI-PQPLAQEVIDLLRPKVVVRKAGAQPSPIPaGKMRHAR--L-AS-GATAGYG--TEAA--AIVESEPSFDNVD 214 Roseovarius nub...
ZP_05360474  121 SAGD-LV-QTTRIPGIIAPPDRKLTIRDLLMAGRMDG-NALEYVQe-T-GF-VNNAGMV--AEGN--VKPQSDIKFDLKS 190 Acinetobacter r...
ZP_02359374  143 SGSNsLV-AADRQAGIIAPPQRQMTIRNLLMPGQ-TSsSSIEYTVe-T-GF-TNNAATV--AEGA--QKPTSDLTFNLKN 213 Burkholderia ok...
ZP_06193530  127 PGQI-VA-PQRL-PGIDTTPKQRLFIRDLIAPGKTGS-STIYWVQq-T-GF-TNKAAAV--PENT--AKPYSDIQFAEKI 195 Serratia odorif...
ZP_04528075  103 DNAA-VI-PKQFINELEEIKKGYGALKGYCDVIPVTK-NEGSKPVvdY-DQ-NELAEIA--EGAD--IVd-GELVTTDIT 172 Clostridium but...
ZP_02994786   97 DNAA-VI-PKQFVNKLIEIQKGFGSLKGLCDVIPVTK-NEGTIPVidL-DQ-NEMADVA--EGED--IVd-GTLVTTDVP 166 Clostridium spo...
WP_012367785 111 SAGV-LIqPMQVPGIIMPGMRRL-VIRDLLAQGRISS-NSLEYVR--EkLF-TNSAAPV--KEKA--QKPESNLTFEKQT 180 Proteus mirabilis
WP_011444310 184 SAGD-LI-VPQRQPGIIGLPQRRMTIRDLLTPGNTGS-NAIQYVK--E-TGfTNNAATV--TETAgtAKPQSEIKFDIVT 255 Novosphingobium...
WP_011590785 121 NNGA-VI-PQEFVNEFEKLKEGYPALKSYCHVIPVAR-NSGKLPV--R-AG-GSVTKLAnlEEDT--ELVKAMMKTKPMS 191 Clostridium per...
WP_011789763 121 SGGA-LV-RPDRMAGIIGGPERRLTIRDLIAPGETES-NSVEYVKe-T-GF-TNNAAPV--AENT--GKPYSEITFGLVQ 190 Shewanella sp. ...
ZP_00960168  215 MAFKKLTALVPISNDLLRQSAVAMARVVRNDVVMQMAAREDIAFLRNDGTsG-T-PKGLKSW--CLAPnWkvETAKTADA 290 Roseovarius nub...
ZP_05360474  191 TTAKVIAHYMKASRQILDDASQ-LQSYIDGRLRYGLAFKEEQQILNGDGT-GqN-LLGIIPQa-TAYArPagVSTTAESK 266 Acinetobacter r...
ZP_02359374  214 QPVRTIAHLFKASRQILDDAPA-LQSYIDGRARYGLQLAEENQLLKGDGT-GaN-ILGILPQasAFAPsI---TLTNATS 287 Burkholderia ok...
ZP_06193530  196 TPVRTLAHMFKASKQILDDFAQ-LQSTVDAELRFGLKYVEEQEILFGDGT-GaH-LEGIMPQasKYKAaF---EVAMQNG 269 Serratia odorif...
ZP_04528075  173 FKCIKIGLIQTLSSELVDDAEVEIEGIARTNFAEISVAKENKKIMKVVDD-----------------------SATVVEA 229 Clostridium but...
ZP_02994786  167 FKCAKVGLIQSLASETVDDAEVEMEGLVKKNFANIATVKENAKILKVIKD-N---------------------ATEVDGA 224 Clostridium spo...
WP_012367785 181 ANVITIAHWIQASRQVMDDAVQ-LQSYVNNRLLYGLALVEEEQLLNGDGTaD-N-LTGI-NHv-ATAY-D--TTLSATGD 252 Proteus mirabilis
WP_011444310 256 SSVTTIAHWVLATKQILDDVPQ-LRSYIDGRLRYGLEYVEEGQLLNGGGT-G-TdLNGIYTQatAFAA-P--ITPTAAGM 329 Novosphingobium...
WP_011590785 192 YDINDYGLLAPIDNSLLEDSEINFLEFVNEEFVEYAVNTENSEVV------D-Q-ANKLLATe-EVKd------------ 250 Clostridium per...
WP_011789763 191 AGVRTIAHLFKASRQILDDAKQ-LQSFINARAEYGLMIKEELQLLYGNNT-GaN-LHGIIPQa-SAYVkPtgAAVVDEQH 266 Shewanella sp. ...
ZP_00960168  291 V--EALINsL--VNLVEDADVSmmAPGWAMRASTKNFLAGLRDANGYPLY--PSIDK-TGELKGYQIFTSSQ--IPn-NL 360 Roseovarius nub...
ZP_05360474  267 I--DTLRFaM--LQAILAEYPA---SGHVLNPIDWAAIETLKDTSGQYIIg-NPQGTlNPTLWGLPVVETQA--IA---- 332 Acinetobacter r...
ZP_02359374  288 I--DRIRLaL--LQAVLAEFPA---TGIVLNPIDWASIELTKDAQGRYIVgnPVNGT-TPRLWNLPVVETQA--MT---- 353 Burkholderia ok...
ZP_06193530  270 I--DDLRLaM--LQAQLARFPS---TGHVLHFTDWAKIELLKDTLGRYILa-NPSALvGPTLWGLPVVATEA---P---- 334 Serratia odorif...
ZP_04528075  230 SdyTALED-I--MAKALPTVKT--NLITLCNVEGYALLKNMKDKQGRSLNliTTVGS-IEVFNGKPIVPFDS--SLvtPT 301 Clostridium but...
ZP_02994786  225 TsyEDVEK-A--IDGSLPSIKA--GLVTLTNVAGYVELKNKKDKQGRSLNl-ITNINgVEYFHEKPIITVDDilLP---- 294 Clostridium spo...
WP_012367785 253 ThaDLIAH-A--IYQVTESEFS--ASGIILNPRDWHAIALMKDKEGRYIFggPQAFT-SNVMWGLPVV-------P--TK 317 Proteus mirabilis
WP_011444310 330 MtkIDIIR-LaiLQAALAELPA--NG-IVMHPSDWADIELTKTDDGAYLFanPQGGS-EARLWRLPVVETQA--MT--Vd 400 Novosphingobium...
WP_011590785 251 --yIEMVE-K--INSLVPNARS--RAVIVTNSLGRGYLDALMDKQGRPLLkeLSDGG-SLIFKGRDVVELDS--TT--FN 318 Clostridium per...
WP_011789763 267 I--DRIRLaL--LQAALAEYAA--DG-IVLNPIDWAVIEMLKDSNKNYLIg-KPQGQtAPTLWNRPVVETQS--IV---- 332 Shewanella sp. ...
ZP_00960168  361 GAGsD-TeITFADFSEIM--IGDAlnltIATSDQatfvnqsgdPVSafQNDLTLMRAISEHDLAPMHDAAISGATV 433 Roseovarius nubinhi...
ZP_05360474  333 ANK-----FLTGAFSMGAq-IFDRwlsrVEVATE---------NEDdfIKNLVTILAEERLALAVYRPEAFIYGDI 393 Acinetobacter radio...
ZP_02359374  354 ANE-----FLVGAFSMAAq-IFDRmeieVLLSTE---------NVDdfEKNMVSIRAEERLALAVYRPESFVTGSL 414 Burkholderia oklaho...
ZP_06193530  335 AFLgK---FLTGAFSAGAq-LFDReeanVVISTE---------NADdfEKNMISIRCEERVALAVKRPEAFVTGAF 397 Serratia odorifera ...
ZP_04528075  302 GDKtC---IFYSLAMKEAvkFFDRkgatIARSTE---------AGF--NNDTVKLRILERLDVKPGSKRSVKKIEL 363 Clostridium butyric...
ZP_02994786  295 VSEgKtQvFYVANMNEAVk-YCDRkavtIARSTE---------AGF--KDDTVKLRILERFVPVLGAKRSIKKIEF 358 Clostridium sporoge...
WP_012367785 318 AQK-QgE-FTVGAFDLASq-VWDRmnavIEVSREd-------rDNF--VKNMLTILCEERLALAHYRPQALIKGTF 381 Proteus mirabilis
WP_011444310 401 ------K-FLTGAFQMGAq-VFDReeanVEISTEd-------sDNF--RKNLVTIRAEERLALAVYRPEAFIKGDF 459 Novosphingobium aro...
WP_011590785 319 TGE-EiK-FIIADLKTLIk-FMDRkqylIDQSKE---------AGY--TKNQTIARIIERFDVesplkksedaavi 380 Clostridium perfrin...
WP_011789763 333 QNE-----FLVGAFKMGAq-IYDRmdieVLISTE---------NDKdfENNMVTIRAEERLALAVYRPEAFVTGDF 393 Shewanella sp. W3-18-1
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