1VQY


Conserved Protein Domain Family
NIPSNAP

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pfam07978: NIPSNAP (this model, PSSM-Id:400368 is obsolete and has been replaced by 429767)
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NIPSNAP
Members of this family include many hypothetical proteins. It also includes members of the NIPSNAP family which have putative roles in vesicular transport. This domain is often found in duplicate.
Statistics
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PSSM-Id: 400368
Aligned: 29 rows
Threshold Bit Score: 73.8989
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VQY_D        15 VE--ERIYRIRGGKXQEYLKLVREEGIAIQApiLGNLIGYFVT--DIGPl-SQVIHXWGYASLDDRAERRGKLAEDQRW- 88  Agrobacterium f...
Q6N5T9        71 YE--SRVYRCVPGKLPAILKRFETITLKLFEkhGIRQDGFFTT--LVGAsnQELTYLLAWESLAEREQKWTAFATDPEWl 146 Rhodopseudomona...
Q82QD1         4 YQ--LRVYTLRSPEALVAYENIWSQHIPGMAkhRITTHGVWTVpaAPGSeePQLYALVSYRDADDVQERLEAYLSSPEFr 81  Streptomyces av...
Q89KU9         3 YE--MRVYRCVPGRLPALLKRFETATLKLWEkhGIRQAGFFTT--LIGEssQELTYFLAWESLAEREKKWGAFVTDPDWl 78  Bradyrhizobium ...
Q89P12         7 VD--LRVYTIRLRKMAEFIEVFDRLAIPVQLkyLGRPLGMFTS--AVGPl-NQIVHLWGFPDMGEFERRHAERDKDPDW- 80  Bradyrhizobium ...
WP_012070633   1 mitcYVRYVIDPKKVREF-EEYAKMWIPLVEkfGGQHNGYFLP--SEGAn-NIALALFTFESLSAYEDYRTKSLNDAEC- 75  Marinomonas
Q89JD9         9 SVtvFIRYQLDPFKRAQF-EEYSKRWLTIIPkcGGDLIGYFMP--HEGTn-NIAFALITFESLAAYEAYRARLRQDAEG- 83  Bradyrhizobium ...
Q2YLT3         1 mitcVITYDIDPNRQELF-AQYARNWGACSPrcGADLIGYYAP--HEGSt-STAYGIYSLPSLADYEAYRSRLAADPLG- 75  Brucella abortu...
Q5LMH4         1 MLtcIIRYHIDPTKRAQF-ERYARTWGQAIPrcGADLIGYYAP--HEGSs-TLAYGIYNIPSLAEYEAYRTRLVADPLG- 75  Ruegeria pomeroyi
WP_006312613   1 MLtcFIRYEIDPFKVDAF-ERYARNWGEAIPrcGADLIGYYAP--KEGSs-TIAYGVYNIENLAAYEAYRARLAADPAG- 75  Agrobacterium
1VQY_D        89 QafipRLSVL--IESSENRILLPTDFSP 114 Agrobacterium fabrum str. C58
Q6N5T9       147 AakaeTEKDGqiVDTITNQLLVPTAFSA 174 Rhodopseudomonas palustris
Q82QD1        82 a--dmEGFDIsqIVGVAESVLTPTADSP 107 Streptomyces avermitilis
Q89KU9        79 EarskSEADGqiVGNIVSQLLTPTAFSA 106 Bradyrhizobium japonicum
Q89P12        81 PaylqASEHL--IVAQENRLIR-----R 101 Bradyrhizobium japonicum
WP_012070633  76 IkafeFADKVdcIISYERSFFRPVlg-- 101 Marinomonas
Q89JD9        84 ManfhFAEEHkfILAEERTFLRKVV--L 109 Bradyrhizobium japonicum
Q2YLT3        76 RenyeFAKREgfIRRESRLFVKLASaph 103 Brucella abortus 2308
Q5LMH4        76 RqnydFAQSEkfILREDRTWLKLAS-AP 102 Ruegeria pomeroyi
WP_006312613  76 RenyeFARREqfIRREDRLFLRLAS-AP 102 Agrobacterium
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