Conserved Protein Domain Family
Peptidase_M9

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pfam01752: Peptidase_M9 (this model, PSSM-Id:396355 is obsolete and has been replaced by 426409)
Collagenase
This family of enzymes break down collagens.
Statistics
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PSSM-Id: 396355
Aligned: 24 rows
Threshold Bit Score: 263.437
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
tigr:NT01CX1295  252 EVSKLSLINNi-tDDNEWLidngiyysgrlakahsdmrvpqktlekalevypylsdhylkAVETIAYKFngTKLDgsKID 330  Clostridiu...
tigr:GBAA_0555   298 EINRIALLNEv-tQENKWLvnngiyfasrlgkfhsnpnkglevvtqamhmyprlsepyfvAVEQITTNYngKDYSgnTVD 376  Bacillus a...
CAL83155         278 TISKFAGISKv-tEDNGWIinngiyytskfaiyhsnpsiphsvidkcleilpayseqyyiAVERIKEDFncKDSKgnVVD 356  Clostridiu...
P43153           298 RLESLCTIGDklnNDNAWLvnnalyytgrmgkfredpsisqraleramkeypylsyqyieAANDLDLNFggKNSSgnDID 377  Clostridiu...
jgi:Fbal_1101    323 LLERYSMTGH---GSGVWL-----------------------------------------AAAEMADYYd--DCA--DYG 354  Ferrimonas...
AGN11368         337 IFSRYSMDGY---GSVVWL-----------------------------------------AAANMADYYd--NCA--DYG 368  Simiduia a...
Q7NT10           334 ilagssMTGA---DNELWL-----------------------------------------AAAEAVKYYdnDNCA--EYG 367  Chromobact...
Q63MJ0           339 mlASTTMTGP---DNDLWL-----------------------------------------AAAEAADYGdpGNCA--DYG 372  Burkholder...
Q8EJ34           347 ILNSTSKNDS---SRVLWF-----------------------------------------AAAEMADYYdrSNCN--AYQ 380  Shewanella...
Q2SA85           318 LMDKYPLASD---TVNMWA-----------------------------------------LLAGAVELNdpENCS--EYD 351  Hahella ch...
tigr:NT01CX1295  331 LSNIKEEAKKKYTPKTYKFDNGSVVIkaGDKVSEEKIKRLYWASKEVKAQFHRVIGSDNPLEKGHPDDILNIVIYNNPKE 410  Clostridiu...
tigr:GBAA_0555   377 LEKIRKEGKEQYLPKTYTFDDGSIVFktGDKVSEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEE 456  Bacillus a...
CAL83155         357 IDKLLEDGKKHYLPKTYTFDNGKMIIkaGDKVDESKIQRLYWASKEVKSQFHRIIGNDKPLEAGNADDVLTMVIYNSPEE 436  Clostridiu...
P43153           378 FNKIKADAREKYLPKTYTFDDGKFVVkaGDKVTEEKIKRLYWASKEVKAQFMRVVQNDKALEEGNPDDILTVVIYNSPEE 457  Clostridiu...
jgi:Fbal_1101    355 VCGYQAELEAQVLAIEYSCSSTLRIR--AQAMTQAQLSQSCAEMAEQETTFHQMLETGYEPVADDNNTALEVVIFDDYDN 432  Ferrimonas...
AGN11368         369 ICGYQEQLEAQILSIHHTCSSTIKIR--AQEMNGTELADSCNQMAQQEVTFHQMLTTNYQPVANDLNTDLEVVIFDDYNN 446  Simiduia a...
Q7NT10           368 TCGFETRLADAILVNRYTCSPTIHIR--AQEMTTDQMQSSCALLQKEESYFHQMLQTRNQPVANDNSTSLEVVVFDDYNN 445  Chromobact...
Q63MJ0           373 TCDYQKRLIEAVLTHRYSCNANVRIL--AQDMTVPQFQSACQSVAQEEDYFHRMMKTGHVPVANDHNDTIEIVVFGDYDN 450  Burkholder...
Q8EJ34           381 ICGFKAQLAADSLPFNWKCSDSLKIR--AQDLYQDQAKWACGVLSQQESHFHTILETGMQAVAQDNNDDLELVIFGSSSE 458  Shewanella...
Q2SA85           352 ACNVKQRVKEVVLTIRHDCSPTITVN--AQAMSTKELASACETLGMRENIFHDMLNTGKQPVADDFNDKLELVVFKNSGA 429  Hahella ch...
tigr:NT01CX1295  411 Y-KVNTILYGYSTDNGGIYIE-------NKGTFFTYERTEKD---SIFSLEelfrHEFTHYLQGRYLVpgmwgVSDFYkG 479  Clostridiu...
tigr:GBAA_0555   457 Y-QLNRQLYGYETNNGGIYIE-------ETGTFFTYERTPEQ---SIYSLEelfrHEFTHYLQGRYEVpglfgRGDMYq- 524  Bacillus a...
CAL83155         437 Y-KLNRTLYGYSVDNGGIYIE-------GIGTFFTYERTPEE---SIYSLEelfrHEFTHYLQGRYLVpglfnEGDFYkG 505  Clostridiu...
P43153           458 Y-KLNRIINGFSTDNGGIYIE-------NIGTFFTYERTPEE---SIYTLEelfrHEFTHYLQGRYVVpgmwgQGEFYq- 525  Clostridiu...
jgi:Fbal_1101    433 YaRYAGTFFGISTNNGGMYLEgnpategNQARFIAYEADW-LpefEVWNLR----HEYVHYLDGRYNL-----YGDFGdS 502  Ferrimonas...
AGN11368         447 YnSYAGTFFGINTNNGGMYLEgnpaqagNQARFIAHEASWKRpefEVWNLR----HEYVHYLDGRFNL-----HGDFGdS 517  Simiduia a...
Q7NT10           446 YsKYAGVIYGISTDNGGMYLEgnpadpnNQARFIAHEASWLRpvfKVWNLE----HEYIHYLDGRFDM-----YGDFAaA 516  Chromobact...
Q63MJ0           451 YrKYASVIYGISTDNGGMYVEgdpsapgNQARFIAHEASWLRpefKVWNLE----HEFTHYLDGRYDM-----AGDFAaS 521  Burkholder...
Q8EJ34           459 YqSLANSIFGINTNNGGMYLEgspaglkNQARFIAYEAEWRQpdfHVWNLQ----HEYVHYLDGRYNL-----FGDFSrS 529  Shewanella...
Q2SA85           430 YgDFGWLLFGIDTNNGGMYLEgtpsdpnNQARFIAYQADYAPgehQVWNLE----HEYVHYLDGRFDL-----YGDFNtG 500  Hahella ch...
tigr:NT01CX1295  480 NNCRLTWFEEGSAEFFAGAtrkdnilprKSEVKGISWSPERRFSVTKLLHSQY-GSFD----FYNYGFAFNDYI------ 548  Clostridiu...
tigr:GBAA_0555   525 -NERLTWFQEGNAEFFAGStrtnnvvprKSIISGLSSDPASRYTAERTLFAKY-GSWD----FYNYSFALQSYL------ 592  Bacillus a...
CAL83155         506 NSGRITWFEEGSAEFFAGStrts-vlprKSMVGGLSENPKERFSADKILHSKYdDGWE----FYKYGYAFSDYM------ 574  Clostridiu...
P43153           526 -EGVLTWYEEGTAEFFAGStrtdgikprKSVTQGLAYDRNNRMSLYGVLHAKY-GSWD----FYNYGFALSNYM------ 593  Clostridiu...
jgi:Fbal_1101    503 ISEATIWWIEGLAEYISKL---------DDNADAFSVGLNNqYLLSDLFGNDY-NSGQd--aIYRGGYLAVRFMferhrs 570  Ferrimonas...
AGN11368         518 ISEATIWWIEGLAEYVSQG---------NNNQQAIDVTRANgYSLSSLFANTY-DSGTd--rIYRGGYMAVRFMferhrs 585  Simiduia a...
Q7NT10           517 TQQPTVWWIEGLAEYLSLR---------NDNQTAIDVAKTGnYKLSQIFGNTY-DMPDyvtrAYRWGYMATRFMferhra 586  Chromobact...
Q63MJ0           522 TAKPTVWWIEGLAEYISRK---------NDDQESIDAVRTNaYRLSDVLQTTY-SSGDyvtrAYRWGYMATRFMferhra 591  Burkholder...
Q8EJ34           530 VSANTIWWIEGLAEYISYR---------DANPAAIAMGETGeFMLSTIFKNTY-DSGQd--rIYRWGYLAVRFMfenhrd 597  Shewanella...
Q2SA85           501 MQVPTVWWTEGLAEYVSKL---------KDNPGAEDVARREkVALSKILRNTY-DDGVd--rIYRWGYWSARYMleqrps 568  Hahella ch...
tigr:NT01CX1295  549 ----------------------------YNNK 552  Clostridium novyi NT
tigr:GBAA_0555   593 ----------------------------YTHQ 596  Bacillus anthracis str. 'Ames Ancestor'
CAL83155         575 ----------------------------YNNS 578  Clostridium botulinum A str. ATCC 3502
P43153           594 ----------------------------YNNN 597  Clostridium perfringens str. 13
jgi:Fbal_1101    571 qvdallaelrv-gdyagyasqmsaigssHDSE 601  Ferrimonas balearica DSM 9799
AGN11368         586 evdtilgyfra-gnytgyasfmasigtsYDSE 616  Simiduia agarivorans SA1 = DSM 21679
Q7NT10           587 dvdamlplfrkgdyaggymgmmrqigsrYDGE 618  Chromobacterium violaceum
Q63MJ0           592 dvdaivsrfrv-gdydgyadyvaymgnrYDSE 622  Burkholderia pseudomallei
Q8EJ34           598 dvrqiltflrn-nqyaeyqafmdsigtrYDNE 628  Shewanella oneidensis
Q2SA85           569 dttqilswfra-gdyesfeawlnstgqrYDEH 599  Hahella chejuensis KCTC 2396
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