2WK1


Conserved Protein Domain Family
TylF

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pfam05711: TylF 
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Macrocin-O-methyltransferase (TylF)
This family consists of bacterial macrocin O-methyltransferase (TylF) proteins. TylF is responsible for the methylation of macrocin to produce tylosin. Tylosin is a macrolide antibiotic used in veterinary medicine to treat infections caused by Gram-positive bacteria and as an animal growth promoter in the swine industry. It is produced by several Streptomyces species. As with other macrolides, the antibiotic activity of tylosin is due to the inhibition of protein biosynthesis by a mechanism that involves the binding of tylosin to the ribosome, preventing the formation of the mRNA-aminoacyl-tRNA-ribosome complex. The structure of one representative sequence from this family, NovP, shows it to be an S-adenosyl-l-methionine-dependent O-methyltransferase that catalyzes the penultimate step in the biosynthesis of the aminocoumarin antibiotic novobiocin. Specifically, it methylates at 4-OH of the noviose moiety, and the resultant methoxy group is important for the potency of the mature antibiotic. It is likely that the key structural features of NovP are common to the rest of the family and include: a helical 'lid' region that gates access to the co-substrate binding pocket and an active centre that contains a 3-Asp putative metal binding site. A further conserved Asp probably acts as the general base that initiates the reaction by de-protonating the 4-OH group of the noviose unit.
Statistics
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PSSM-Id: 428598
Aligned: 14 rows
Threshold Bit Score: 358.58
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2WK1_A             35 SSLYLDLMIKVLAGTVYED------------------------------PAHRENFSHRDSTYREEVRNEGRDW------ 78 
EST19413           11 SSLYLDLMIKVLAGTVYED------------------------------PAHRENFSHRDSTYREEVRNEGRDW------ 54 
jgi:Haur_2419       6 AQLYLDLLKRCIMGLVYEDqplrn--------------------ivyepFSINAPYTGPYSTFDREKRLNGHEW------ 59 
jgi:FraEuI1c_5710  24 NEDYLDLMKRILTNTIYQD----------------------------------PPVSRAEAAFDGDRRATGQDW------ 63 
CAL99994           22 GTRYLELMKRVLTNVVYEDv----------------------------tHRLDHANARGNPRFDPERRRNGLDW------ 67 
WP_013068144      319 GERYLDLLKAVLLNETGLEtevaldalrgrkd----ippafwsetlydvPGQLAPALAEKR----RLRAQGLDTltaqag 390 Rhodobacte...
WP_014747567        4 TRLYLDLLKQVLLNQTGLEaelrlahvaachvagtdpdpyhlrdirfteAETFAAAAARRD----DGRWTAADR------ 73  Tistrella ...
jgi:Plim_3940      20 tDPYIELLKNVLTGAVYEEsawrredgyhrdkf---rplkslrqfflksWAKRGYLVVKAQHFDAKKRELGTDW------ 90 
WP_013418537       29 RALYIDLLQKTLTNEIYGD---------------------------------LPMDPWSGGKYDATKRALGRDW------ 69  Rhodomicro...
WP_015846207        6 AEMYLELLKKTILFEIWLE---------------------------------------HEPGATKENRLQGLDW------ 40  Paenibacil...
2WK1_A             79 P--ANAHTMIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEdGYA 156
EST19413           55 P--ANAHTMIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEdGYA 132
jgi:Haur_2419      60 P--SQAHTMLSMHRLNNIQSLVTDILEKQIPGDLIETGVWRGGATIFMRGILKAYNCNDRTVWVADSFQGFPKNEEeGLL 137
jgi:FraEuI1c_5710  64 P--SVAHTMVGRARLDNVHACAATAITEGVPGDLVETGVWRGGTAIFMRAVLRAYGATDRLVWACDSFEGMPVSGPdSHP 141
CAL99994           68 P--SVAHTMIGRKRLDNLHDCLERVVADDVPGDLAETGVWRGGACIFMRAFLAAHGITDRQVWVADSFEGMPDTDGsAHD 145
WP_013068144      391 P--PLGYTMIGRRRLDHLQDCVATVLAEAVPGDLMECGVWRGGACLLMKAMLDLAGAQDRSLWVADSFAGLPPP---ALP 465 Rhodobacte...
WP_014747567       74 PglGLAYTMTGRQRLDHLEACLDDIRTEGVPGDLIETGVWRGGCGIFMRGYLAVHAMADRRVWLADSFAGVPAP---SHA 150 Tistrella ...
jgi:Plim_3940      91 P--LFGYSMVGKRRLDQLEVAIRTIAAEQIPGNILEAGVWRGGASMFMKALLNHLGEGHRQLWLADSFEGLPKP---RLA 165
WP_013418537       70 P--SQAMTMIGAKRMANLRQLTESVINQGVPGDFIETGVWRGGACVFVRGILKSYGVTDRRVWVADSFEGLPPPDP-NCP 146 Rhodomicro...
WP_015846207       41 P--IIAHSMIGRIRMNNLHMLMNDVIANNVQGDFIETGVWRGGACIFMAGYLKAHGVRKRKVLVADSFEGLPKPDP-QYP 117 Paenibacil...
2WK1_A            157 GDR----------K-MALHRRNSv--L-----AVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218
EST19413          133 GDR----------K-MALHRRNSv--L-----AVSEDEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 194
jgi:Haur_2419     138 GETespglpqeqhG-PPPKPIQDi--LdllwkGTSYEDVRQHFEQYGLLDDQVKFLKGWFCHTLHQAPIDNLALLRLDGD 214
jgi:FraEuI1c_5710 142 SDQ----------Q-TRLHLANAv--L-----AIPLEQVRANFDVYGLLDDQVRFLKGWFRDTLPTAPIERIAVLRLDGD 203
CAL99994          146 LDR----------E-LALHRMNEv--L-----GIPLEVVRDNFRRYGLLDEQVRFLPGWFADTLPAAPVSELAVLRLDGD 207
WP_013068144      466 EDE----------GlDLSRERAPa--L-----AVSQARVERAFADFGLLDARVRFLPGFFADTLAGCAVEKLALLRLDGD 528 Rhodobacte...
WP_014747567      151 IDA----------G-DTLFQQNDl--L-----AISRPLVEDAFRRFDLLDDRVRFVEGLFEETLPGLDTGPLALLRLDGD 212 Tistrella ...
jgi:Plim_3940     166 PDT----------K-DKRHDLSEcdfL-----KVSIETVSANFERFGLLDENVRFLKGWFCDSLPHANPGKLALLRLDGD 229
WP_013418537      147 QDA----------G-DKHHTWEP---L-----AISQEQVRDNFSKLGLLDDQVKFLKGWFKDTLPGAPIERLAILRLDGD 207 Rhodomicro...
WP_015846207      118 IDA----------T-SKFHEQDF---L-----RVSLPEVQGNFKKYDLLDDSVVFLKGWFKDTLPTAPTEKIAIARLDGD 178 Paenibacil...
2WK1_A            219 LYESTWDTLTNLYPKVSVGGYVIVDDYMMcPPCKDAVDEYRAKFDIADELITIDRDGVYWQR 280
EST19413          195 LYESTWDTLTNLYPKVSVGGYVIVDDYMMcPPCKDAVDEYRAKFDIADELITIDRDGVYWQR 256
jgi:Haur_2419     215 LYDSTYDALEALYPKVSQGGYVIVDDYATfEECYNAVHDYLESIGAEVTMQPIDEDSVFWQK 276
jgi:FraEuI1c_5710 204 LYESTMDTLDSLYPKVSPGGFVIIDDYQI-PACREAVHDYRDAHGITAPLTRIDQWAVFWRl 264
CAL99994          208 LYESTMDALVHLYPRLSPGGFVIVDDYAL-PPCRAAVREFRRDNGIHEPVEWIDYMGVYWRR 268
WP_013068144      529 LYSSTLQALEALYDRVAPGGFVIIDDYGAlGQCALAVDRFRAARGITAPLGMIDWTGAFWRK 590 Rhodobacter capsulatus
WP_014747567      213 LFTSTCAALEALYDRVAPGGWIIIDDYGAvQGCRIATDMFRHVRGITTPLDRVDWTCVAWRK 274 Tistrella mobilis
jgi:Plim_3940     230 LYESTMDVLKPLYQNVVPGGFVVVDDYLAwSGCREAIDEFRELHKINAPMFNIDGTGVYWRv 291
WP_013418537      208 MYGSTMDALLPLYAKVSRGGFVIVDDFGAvQGCRQAIADFRAANNITSPIIDIDGVGVFWQv 269 Rhodomicrobium vannielii
WP_015846207      179 MYSSTMDALNNLYPKVSLGGYVIIDDYSI-GYCAAAVHDFRAAHNITDPLVTIDITGVYWKK 239 Paenibacillus sp. JDR-2
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