Conserved Protein Domain Family
F-box_FBXL4

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cd22117: F-box_FBXL4 
F-box domain found in F-box/LRR-repeat protein 4 (FBXL4) and similar proteins
FBXL4, also called F-box and leucine-rich repeat protein 4, or F-box protein FBL4/FBL5, is part of an SCF (SKP1-cullin-F-box) protein ligase complex. It serves as a clock output molecule that regulates sleep through promotion of rhythmic degradation of the GABA(A) receptor. Biallelic pathogenic variants in FBXL4 are associated with an encephalopathic mtDNA maintenance defect syndrome that is a multi-system disease characterized by lactic acidemia, developmental delay, and hypotonia. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438889
Aligned: 24 rows
Threshold Bit Score: 55.706
Created: 11-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #   #  ##  ##   # ##   ### #                 
Q9UKA2        280 FDKLPyELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPl-qYIHLNLQ 326  human
GBM25693      251 LDVLPsEVTSFIFSFLDLQSLCSASKTSKIFQKICYDPa-lYRDLNLQ 297  Araneus ventricosus
XP_638057     720 FDLLPyEMIQYIFTLMDATHLIRMSRTCKYFNRICLDDn-iWRDLYNR 766  Dictyostelium discoideum AX4
Q93YV9         38 EQLVP-EITTHALSYLDYPSLCRLSMTNSLMRKAANDDn-aWKALYHK 83   thale cress
ADE76907        3 EQLVP-EITTHALSYLDYPSLCRLSMTNSSMRRAANDDn-aWKALYHK 48   Sitka spruce
EFJ10133       34 EQLVP-EITHHVLSYLDFKSLCCMSMTNVAMRKAANDEs-aWKSLYHK 79   Selaginella moellendorffii
KYQ94220      603 ISLLPgEILHYILTFLDAAGLCSISLTCKAFYKITTNDf-lWKELFES 649  Tieghemostelium lacteum
Q9SDA8         23 LDLLPaALLETIMTKLDVASLCSLASTCKTLKSCVTRVltfTPNFHIF 70   thale cress
XP_014773136  237 FKLLPqEILFFLLSYLDQVSLCLLSQTCKYLRDSTYDAf-lWTKVNLK 283  Octopus bimaculoides
XP_640968    1029 LFYLPhEIIMTILSYLDHRALCKVSRTCKYMKQMSESDi-lWYRLYFN 1075 Dictyostelium discoideum AX4

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