Conserved Protein Domain Family
NKAP

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pfam15692: NKAP (this model, PSSM-Id:406184 is obsolete and has been replaced by 464805)
NF-kappa-B-activating protein
NKAP is a family of eukaryotic proteins that interacts with NF-kappa-B. It is a nuclear regulator of TNF- and IL-1-induced NF-kappa-B activation. NKAP does not interact with RIP in mammalian cells family is often found in association with pfam06047.
Statistics
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PSSM-Id: 406184
Aligned: 41 rows
Threshold Bit Score: 34.334
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WGS:AAPU:GI20931-PA  39 NVMKKARAnttndyWDKKLIEAEE----KDPNRWRHTgykkmyIQGESSSGESERDSAQAsysrysgapgn-------ag 107 Drosophi...
XP_005227490        120 KEREESLRq-------KRLSERERigelGAPEVWGLS------PKNPEPDSDEHTPVEDEepkksts------------- 173 cattle
Q5SZT7              112 KEKEESYRq-------RRLKERERigelGAPEVWGLS------PKIPEPDSDEHTPAEDEvknqks-------------- 164 house mouse
XP_002714189        106 eEKEESYRh-------RRLKERERigelGAPEVWGLS------PKLPEPDSDEHTPVEDEedknqks------------- 159 rabbit
XP_001929056        112 KEKEENYRq-------RRLKERERigelGAPEVWGLS------PKLPEPDSDEHTPVEDDevktkkt------------- 165 pig
XP_003801897        110 KEKEESYRq-------RRLKERERigelGAPEVWGLS------PKFPEPDSDEHTPVEDEvvknek-------------- 162 small-ea...
XP_003421185        110 DYKEESHRq-------RRLKERERigelGAPEVWGLS------PKCPEPDSDEHTPVEGEaktqess------------- 163 African ...
Q6GL16               70 KGKEEILRqrqeafIARRLKERERigelGAPEVWGLS------PKVLEPDSDEHTPVEEDeksnkss------------- 130 tropical...
XP_016284361        133 KEKEESLRq-------RRLNERERigelGAPEVWGLS------PKIPEPDSDEHTPVEEEeakskksassssseeekkkr 199 gray sho...
XP_012408679        349 KAREESLRq-------KRLSQRERigelGAPEVWGLS------PKVPEPDSDEHTPREDRdrdttt-------------- 401 Tasmania...
WGS:AAPU:GI20931-PA 108 pppssassS-ARYGRSRSPHSRSRS 131 Drosophila mojavensis
XP_005227490        174 --sastseE-EKKKKKKSSHSKERS 195 cattle
Q5SZT7              165 --sssdftN-EEKRTKTSHSTKKKR 186 house mouse
XP_002714189        160 --sgsdstS-KEKRKKTSRAQNKKK 181 rabbit
XP_001929056        166 --sssdssS-EEKRKKKTSHSKKKR 187 pig
XP_003801897        163 --sssdssA-EEKKKKKISRSKKKK 184 small-eared galago
XP_003421185        164 --ssdsswE-EKKRKKKASRSKNKK 185 African savanna elephant
Q6GL16              131 --ssesssE-EEKKKRKKKKKKKSS 152 tropical clawed frog
XP_016284361        200 kkkvsrskE-NAQRKRKKKTSKKKH 223 gray short-tailed opossum
XP_012408679        402 ---sssvaSgGKKRKKKTSHSRDRV 423 Tasmanian devil
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