Conserved Protein Domain Family
Transmemb_17
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pfam09799: Transmemb_17 (this model, PSSM-Id:401671 is obsolete and has been replaced by 430835)
Predicted membrane protein
This is a 100 amino acid region of a family of proteins conserved from nematodes to humans. It is predicted to be a transmembrane region but its function is not known.
Links
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Statistics
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PSSM-Id: 401671
Aligned: 97 rows
Threshold Bit Score: 51.8011
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Download Cn3D
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
jgi:MICPUN_50670    274 YFGICWDVTFVLFTFAIMIWKGIKMPY-PKydyQkrdyesVWSIEFAFLFVFIIFEWPRLSLLNKANRGTHHLTMYASIL 352 Micromon...
WGS:AAQB:GK25478-PB  51 QANCIISILWSSSYLLNMVIYVNDLY---N---A------NGLGTLAAYVVAVISEMVRLYAGYSINLCTGATAQWLVLT 118 Drosophi...
EDV99620             32 QTNAYVSVIWSFSYLLHMIIWSFRLWNyTG------------LAMLLAYVLAVGTESLRLYASYSINLGIGATTMWLLLT 99  Drosophi...
XP_002057200         14 QANVYVTIIWAISYLLHLIIWSHMLW---N---Y------TGLAMLLAYVLAVGTEWMRLHASYSINLCTDATTMWLLLT 81  Drosophi...
XP_002010884         34 QANAYVSILWSVSYLLHLCFWSHLLW---N---Y------TGLAMLLAYVLAVGTEWLRLYASYSINLTTNATTMWLFLT 101 Drosophi...
Q9VXV0               19 QANTYVSMVWAMSYMIHMLIRLHHLWNlEG------------LSMLVAYVLAVSAESVRLYAGYSVNLCSGATAMWMLLT 86  fruit fly
WGS:AADE:GA22831-PA  18 EANVYVSAFWAVNYLFYIVVHMDQLWSfDT------------LGLLLAYVLAVGSEIVRLHTTFAVNLRPENASMWLLLT 85  Drosophi...
EEY55863             19 cLEAWFGFLFYPTSCLLLHDKLTALQYsSSl---------SRALPVCCLVVLIPADTARYYLGTRGNLRSQVFPLTAFMF 89  Phytopht...
CAM71898             20 LTSIGCAAIWWIVTLGLLIFKALYLPFpPA----------ALPMEVVASFLVLLVNAFGVFIGMRGNKMESTSAIVISTV 89  Leishman...
Q4DG74               20 YGSAGWSGIWFVVTLGLLIYKGSMLHFpPA----------ALPMEIVSALLLLVIDFAALSLGTRGNLAEEVGTSCLAIG 89  Trypanos...

jgi:MICPUN_50670    353 LAAPIVAYH-LWAMFSA-TYVLKIDVFMNGVSLAFC 386 Micromonas commoda
WGS:AAQB:GK25478-PB 119 LTPCILLPAmVYLRLLT-FGHVFYLSILSNVLFLMI 153 Drosophila willistoni
EDV99620            100 LTPCVLLPAlVYLRLAA-ALGDCWLQFISNVQLVLI 134 Drosophila grimshawi
XP_002057200         82 LTPCVLLPAlVYLRLAV-VFASRWLAFLTNVQFVLM 116 Drosophila virilis
XP_002010884        102 LTPCVLLPAlVYLRLAV-VYANLWLHLLSHAQFVLI 136 Drosophila mojavensis
Q9VXV0               87 VTPCILLPAmVFLRLSA-AGRSLWLRIITNAVFALI 121 fruit fly
WGS:AADE:GA22831-PA  86 VTPCVLFPSmVYLRLSLgDDARLWPHSISYAVLALI 121 Drosophila pseudoobscura pseudoobscura
EEY55863             90 LSACPLVPGlVYLSFFA-EHRLPFDAVAGTGLLLLL 124 Phytophthora infestans T30-4
CAM71898             90 LLSIAAVGA-IYYMWLQ-TYVLMMDLAFSATYLGIN 123 Leishmania infantum JPCM5
Q4DG74               90 LLLVAAVGA-IYYMWLQ-TYVMMLDLAFSAILLGLN 123 Trypanosoma cruzi
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