Conserved Protein Domain Family
seadorna_dsRNA
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TIGR04238: seadorna_dsRNA 
seadornavirus double-stranded RNA-binding protein
This protein family occurs in the seadornavirus virus group, with an N-terminal domain for binding double-stranded RNA, is designated VP12 in Banna virus, VP8 in Kadipiro virus, and VP11 in Liao ning virus.
Links
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Statistics
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PSSM-Id: 275074
Aligned: 3 rows
Threshold Bit Score: 260.263
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAC72057    2 DPVSVVHNFARSQGLPL-NFETVGCEGPSHDPRFVIECKLLDFQHQCTDSSKKRAIQKICVLISNDLKEng---lLEEAK 77  Banna virus
NP_694466   3 NVKGMLQELCVKRGLELpVYEKLSKVGPDHAPTITVKLTANGIEVIEAASSRAQAEKLAAATLYEKMKH------LEVHD 76  Kadipiro virus
AAQ83572    9 NAVGLMQEYAIKLSESApSYEDVGFEGPPHNRSFTIVATFRDKKYEGIGPSKKVARSIAANKIIDDVAEevaninLDDPS 88  Liao ning virus

AAC72057   78 TFKPEYKAIAQLYGkfFKRYIVEKessVITPFKLINNQILLHD------NDETIDYGSSEFMFRHMLLCYIIyKQEIKVs 151 Banna virus
NP_694466  77 ERKSVSIMSILMVS--FANALINK---VIDLFSTCKQDIIFCSevdevtDDVHFDPTLSNLMSSGLTDRSAW-NRLYKL- 149 Kadipiro virus
AAQ83572   89 TRRCVFTLACELASekIANALLTG---VISQIGGAVDLVKLC-------RNTTYDYGAD-------LLIELWdMRKYD-- 149 Liao ning virus

AAC72057  152 eMCNMTFSPDYiECLSHH------LTSIVEIEFHHQDCGNLSIVIFAKDNDTKKQLQIQVSA 207 Banna virus
NP_694466 150 -LSDLALENGF-NCITRKngkgllFRSLLNDDLVANESFKNSSLNVAFNTTEDKEVSMLCYN 209 Kadipiro virus
AAQ83572  150 -------KSGF-DTMIKH------MRRWFTAAGVYPTVNEETITIEEMDEDDKDHPHNFVDA 197 Liao ning virus
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