Conserved Protein Domain Family
Nucleoporin_FG

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pfam13634: Nucleoporin_FG 
Nucleoporin FG repeat region
This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145.
Statistics
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PSSM-Id: 463941
Aligned: 299 rows
Threshold Bit Score: 30.2769
Created: 25-Mar-2022
Updated: 13-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7SEK6        255 TLFGa----KPATSGGSLFGGASTTpattstttttaPATSGLFGan---tSKPAEAAKPATgG----LFGATpatsapat 323  Neurospora cr...
XP_012551253 1408 SVFG------QPSTQASVFGTPTSA------------APAAAFG--------SPSQTTQTS------LFGT--------- 1446
Q4UE62        286 ETFG-----SGDKVAPSLFGTSEPKtvs------lgSVTAPTFNlv---etDQTHKVTESSlSsksdSFTTSl------- 344  Theileria ann...
EDV21207      464 SIFGgk--rEDQANLKSIFGGKREDq----------ANLKSIFG-------GKREDQANLK-S----IFGGKr------- 512 
XP_008183683 1298 SIFSt---pTSTSIAPSIFGATTST-----------TNVSSIFG-------SPSNTSMAPS------IFGA--------- 1341
EFA85118     2008 SVFG-----KPAAAPTSVFGNPTPTkp--------aAAPTSVFG------TSPTTPSTSAS-S----IFGNPt------- 2056
Q555D2       1682 PPFG-----APTSASSTPFGAPQISt----------SSSTNLFGg-----ASSSTAAPSFVsS----PFGAPit-----s 1732 Dictyostelium...
Q555D2       1573 GLFG-----SAAPSTSSPFSIPTSSt----------PATSNPFGsnpfptSSPTTVSSTPSsN----PFGAPs------- 1626 Dictyostelium...
XP_002546869  105 SAFG--------STSTNVFGNNSSN-----------TNATSAFG-------STATAPANTS-S----PFGKP-------- 145 
XP_004350129 1334 PIFGvkppdATTETKPSLFGGATTAe----------TKPPSLFGdktas---sfpsTLTDTkP----STTTTtaa---aa 1393 Cavenderia fa...
Q7SEK6        324 sTTTAASGSLFGANKDATTTSTapaSGGLFGSTTPSTTTttapapsssTTTSGLFG 379  Neurospora crassa
XP_012551253 1447 -ATPTTSASVFGAQTT---------QPSLFGSPTQTSQAsvfg--tpsQNKASVFG 1490
Q4UE62        345 tEQGDSKTSLFGSSKSNLFGDTt--KPSLFGTDDNKLLAp--------ASDTSLFG 390  Theileria annulata
EDV21207      513 -EDQANLKSIFGGKREDQAN-----LKSIFGGKREDQ-----------ANLKSIFG 551 
XP_008183683 1342 -SSTTTSSSIFGNPIKS--------TPSIFG--TPST-----------TTVSSMFG 1375
EFA85118     2057 pSTPAAPTSVFGNPTSPTPAAAs--TSSVFG-KSPATPS---------TSATSVFG 2100
Q555D2       1733 sSSSSSSSLPFGAPTTSSSSSTp-fGASPFGNSMASTTSpfg----apAASPSPFG 1783 Dictyostelium discoideum
Q555D2       1627 lSNSTSSSSLFGAPTTSTAAT----TTPSFGSSPFGAPS---------STSSTPFG 1669 Dictyostelium discoideum
XP_002546869  146 -STTENKPAAFGTSSTTTSAPA---TGGLFGSSTTTS-----------QPSFGGFG 186 
XP_004350129 1394 tTTETKPPSLFGGATSPPSLFGg-pTSSIFGVKPSDATAtt------tETKPSLFG 1442 Cavenderia fasciculata
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