Conserved Protein Domain Family
COG3942

?
COG3942: COG3942 (this model, PSSM-Id:226451 is obsolete and has been replaced by 443142)
Surface antigen [Cell wall/membrane/envelope biogenesis]
Statistics
?
PSSM-Id: 226451
Aligned: 20 rows
Threshold Bit Score: 106.392
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15675802 359 GGVYFTDTSGsgqRRADIMTKLDQwidDHGSTPEIPEHLKITSGTQFSEVPVGYKRSQPQNVLTYKSETYSFGQCTWYAY 438 Streptococcus pyoge...
15673889 295 lqgifatdpayaqklieiiqeykldaydnvdsttqvvdskipesplaaskldnsaypeyngveypgADSYAFGNCTQYVY 374 Lactococcus lactis ...
15673581  83 nlyvsynpnaqsgahnyttnifeqnsllsvgwkygaiawKTMPSDSLPGTPAGWKIDKPMNIDNYSTQTSAYKQCTWWVY 162 Lactococcus lactis ...
15923455  94 tvqagdslsliaskygttyqkimslnglnnffiypgqklkvtgnastnsgsatttnRGYNTPVFSHQNLYTWGQCTYHVF 173 Staphylococcus aure...
15923745 111 rkasqakkvvkqpvqqaskkvvvkqapkqavaktvNVAYKPAQVQKSVPTVPVAHN--YNKSVANRGNLYAYGNCTYYAF 188 Staphylococcus aure...
15927879 103 NYSNNNQSYN---YNNYNSYNTNS---YRTGGLGASYSTSSNNVQVTTTMAPSSNGRSISSGYTSGRNLYTSGQCTYYVF 176 Staphylococcus aure...
15927884  36 NYN-----YN-------------------------TTQTTTTTTTTTTTSSISHSG-----------NLYTAGQCTWYVY 74  Staphylococcus aure...
15928123   1 ------------------------------MEYKKILIRLLIAFAVLFSADFTYQSVEQTHQSHAAVNYYSKNQCTWWAF 50  Staphylococcus aure...
15928145  90 NYYNHSYQYNn--YTNNSQTATNN---YYTGGSGASYSTTSNNVHVTTTAAPSSNGRSISNGYASGSNLYTSGQCTYYVF 164 Staphylococcus aure...
21284294 439 kdatshlsktyatdpnyakklnsiikhyqltqfddermpdldkyersikdyddssdefkpfrevSDSMPYPHGQCTWYVY 518 Staphylococcus aure...
15675802 439 NRVKELGYQVDRYMGNGGDWQRKP---GFVTTHKPKVGYVVSFApgqagaDATYGHVAVVEQIKEDGSILISESN-VMGL 514 Streptococcus pyoge...
15673889 375 NRIIQLGGLVGTHMGNGGEWGINAqaqGYFTTTVPTEGYAVSFPpgvagsSSEYGHVAFVEKVYSDNSILVSEMN-VKGN 453 Lactococcus lactis ...
15673581 163 NQAKEFGINYG--------------------------------------------------------------------- 173 Lactococcus lactis ...
15923455 174 NRRAEIGKGISTYWWNANNWDNAAaadGYTIDNRPTVGSIAQTD------VGYYGHVMFVERVNNDGSILVSEMNySAAP 247 Staphylococcus aure...
15923745 189 DRRAQLGRSIGSLWGNANNWNYAAkvaGFKVDKTPEVGAIFQTA------AGPYGHVGVVESVNPNGTITVSEMN-YAGF 261 Staphylococcus aure...
15927879 177 DR---VGGKIGSTWGNASNWANAAaraGYTVNNTPKAGAIMQTT------QGAYGHVAYVESVNSNGSVRVSEMNyGYGP 247 Staphylococcus aure...
15927884  75 DK---VGGEIGSTWGNANNWAAAAqgaGFTVNHTPSKGAILQSS------EGPFGHVAYVESVNSDGSVTISEMNySGGP 145 Staphylococcus aure...
15928123  51 KRRAQVGKPVSNRWGNAKNWYYNArksKYATGRTPRKFAVMQST------AGYYGHVAVVEQVYKNGSIKVSEYN-FYRP 123 Staphylococcus aure...
15928145 165 DR---VGGKIGSTWGNASNWANAAassGYTVNNTPKVGAIMQTT------QGYYGHVAYVEGVNSNGSVRVSEMNyGHGA 235 Staphylococcus aure...
21284294 519 NRMKQFGTSISGDLGDAHNWNNRAqyrDYQVSHTPKRHAAVVFEagqfgaDQHYGHVAFVEKVNSDGSIVISESN-VKGL 597 Staphylococcus aure...
15675802 515 GTISYRTFTAEQASLLTYVVGD 536 Streptococcus pyogenes M1 GAS
15673889 454 NIVSERHISAGVAALATYIQPK 475 Lactococcus lactis subsp. lactis
15673581     ----------------------     Lactococcus lactis subsp. lactis
15923455 248 GILTYRTVPAYQVNNYRYIH-- 267 Staphylococcus aureus subsp. aureus Mu50
15923745 262 NVKSSRTILN--PGKYNYIH-- 279 Staphylococcus aureus subsp. aureus Mu50
15927879 248 GVVTSRTISASQAAGYNFIH-- 267 Staphylococcus aureus subsp. aureus N315
15927884 146 FSVSSRTISASEAGNYNYIHI- 166 Staphylococcus aureus subsp. aureus N315
15928123 124 LKYNTRVLSKKAARNFNYIY-- 143 Staphylococcus aureus subsp. aureus N315
15928145 236 GVVTSRTISANQAGSYNFIH-- 255 Staphylococcus aureus subsp. aureus N315
21284294 598 GIISHRTINAAAAEELSYITGK 619 Staphylococcus aureus subsp. aureus MW2
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap