Conserved Protein Domain Family
MFS_Set

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cd17471: MFS_Set 
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters
This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 341024
Aligned: 52 rows
Threshold Bit Score: 263.639
Created: 17-May-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ##  ##  #                                #                               
P31436     19 FLLVAFLTGIAGALQTPTLSIFladelkarpimVGFFFTGSAIMGILVSQFLARHSDKqgdRKLLILLCCLFGVLACTLF 98  Escherichia coli K-12
SAL18108   20 ISLAMFLSGIASSFAVPYTSLFgateahmtpvrLGIFMTLTAVSSVIVSTYLGRIADRrsdKKRIVLLSIAGSALGYALL 99  Burkholderia sp. L...
SAK92533   17 LSGATLMLGVAMSFTAPYLSLFsveqadmsplkLGVFMTVIAASGVVASAFAGKWSDRhghHRGLLLAALIASSLGFLLL 96  Burkholderia sp. L...
AGZ43922    6 LFAAVLLLGIADAMVNSYIVLFgadvvgltplqIGVWTSVFALGGITISWWLGRLFDRr-pARAYAIVVILLGSAGYLLL 84  Actinoplanes friul...
OES46005   19 LLVIMLLAGLAVSSAGPLVTLFltkel-gadpsVVGLFYLTSIAGLFINLYTGKLSDRrstRLPFIKYSAIWLSIGWIII 97  Domibacillus sp. S6
ADF38342   24 IFISLFIIGLSVGGFMPYLTVWatntlhatsfqAGFLFVPMSIIGLIVSFYLASLSDKwgkRKPFIIWALLIGTISRMPL 103 Bacillus megateriu...
SEU45456   16 LLTAVLLLGVTEAMIGPYLVLFgaerlrlsafqIGLFLSLTSVSGMAVSLLLGRRYDRrpgRQPAVLAGCLAGTGYLLLL 95  Nonomuraea wenchan...
OCJ02464   18 AAITMLFAVTAQAMAGSYMALLaveraamspleLGTFLTLSGVSSIGVTTLLARWFDQw-pRLWPILLSLSSAALGYGLC 96  Agrobacterium sp. ...
ODS86703   15 ISASLLSIGVGYASTAPYDAIIaidalqighgdFALILTLASIVGVVASVALGWLSDRigdRRLLMLATTLLGAVGMGLM 94  Devosia sp. SCN 66-27
AEV81106   12 LGFMFLASGIATAVVGPFLGLFlstavhanpfqVSAFLIVASLSGVGMSQFIARVSDRrpmRRMLLITAALAGFAGTGLT 91  Actinoplanes sp. S...
Feature 1                        ## ###  #                            #  ##  #                
P31436     99 awnrnyfilLSTGVLLSSFASTANPQMFALARehadrt-------gretvmFSTFLRAQISLAWVIGPPLAYELAmgfSF 171 Escherichia coli K-12
SAL18108  100 cvt---rnyVLLTIFGCVFLSIGAAVFPQLFTfgkarlha---egiehtelPMATLRTTLSCAWVFGPAVGAIVLgvsGF 173 Burkholderia sp. L...
SAK92533   97 clv---rnyTALVAIGIVFLGAGGSAMSLVFSfaraalpv---ddeaerslALATLRTVLSMAWVFGPSVGALVLagaGF 170 Burkholderia sp. L...
AGZ43922   85 prv---snfFVLLLMAATVLGAMGAAFPQLFSlarsvlg-----egaagqrSAPVLRSAWSLAWAVGPLLGALVLshgGY 156 Actinoplanes friul...
OES46005   98 sls---qqsWMVFAVGAVFLSFLGTLNAQTFGvvrdviaa---eketrdatITSIIRTAYSFGWMIGPAIGPLIAsliGY 171 Domibacillus sp. S6
ADF38342  104 aft----hsYTVALILLAIGGFNAFSFFFALLndfivkke---dsksqagtITGTVRMAFSQGYIFGPMLGALIIdhgGY 176 Bacillus megateriu...
SEU45456   96 tgp----pyPLLLLIAVLFLGPGIALFPQLFAlarshedrtespsgdgsgaRTPLLRSVWSLAWAIGPLAGAALLgggGY 171 Nonomuraea wenchan...
OCJ02464   97 mal---aqpWVLMTVAFLLLGPANAAFALVFAmakghldr---qgpavaaqGMAALRMISSLSWVVGPALGAFLIhvwSY 170 Agrobacterium sp. ...
ODS86703   95 ywl---rspMAFVIAYCVILPFGNSAFSQTFAyarvyydq---trpkdaefRITVLRSIYAASWVMVPPLAGWIAavyQV 168 Devosia sp. SCN 66-27
AEV81106   92 smv---rdyWVLLAITMTVTALAGSFYPQSFAyarqvlar---edprraamGISSLRTVFSIAWVGGPPLAAVLLdvgSF 165 Actinoplanes sp. S...
Feature 1                                                                               #  ## 
P31436    172 KVMYLTAAIAFVVCGLIVWLFLPsiqrnipvvtq--------------------pveilpsthrKRDTRLLFVVCSMMWA 231 Escherichia coli K-12
SAL18108  174 NGLFLSAAGAFAAAGLIVLCMREpktydtyeaad-------------------ktsseippqakNAHVYAALVSFTLIGM 234 Burkholderia sp. L...
SAK92533  171 YGLFLFAAACFIACGAIVWRMHDspkgdphsapahyagdptsllevtapdteelvpphagalhsRAEIWRATVAMTLIGL 250 Burkholderia sp. L...
AGZ43922  157 SWLMWTAAGVFFATALTVLVVPRpgaaiv------------------------------tdsapGPTPVLLTVGVTLFFA 206 Actinoplanes friul...
OES46005  172 RLAFWAAVLFFIAILIPLSRLRItersqlekvki--------------------ennkkekrkvNGPLLLFGFICTLMLT 231 Domibacillus sp. S6
ADF38342  177 TLLFLLSGLLSLATLVWVLFALKedsmpqtsah----------------------asskapvgiHSVLIAVFVAALFIFA 234 Bacillus megateriu...
SEU45456  172 TAVLAATAAGYCLMVVTVLGLGGfpygrvavrep--------------------aggdggpavsARAAVLPVAAFTLFHT 231 Nonomuraea wenchan...
OCJ02464  171 AGVYGGAACCSVAALLTILAGRPavmpaittd------------------------aqrrsvpsRWATNAAALALTFFNI 226 Agrobacterium sp. ...
ODS86703  169 FDVYLLAAAAYLVCGAISLTMLAdpatrvvsapp--------------------tpntdgkggiALPMLVGICGVLLINV 228 Devosia sp. SCN 66-27
AEV81106  166 RWVYGTAAVMYLVAALIATRWLPeaeapapag-----------------------qssrddtrpPRVMYPIIAGFVLLTT 222 Actinoplanes sp. S...
Feature 1      ###  #                           #   #                                         
P31436    232 ANNLYMINMPLFiideLHLTDKLTGEMIGIAAGLEIPMMLIAGYYMkRIGKRLLMLIAIVSGMCFYASVlmattpavELE 311 Escherichia coli K-12
SAL18108  235 GSAIATIMLPVLivdqLHGTTAHVAQMVGLGAFAEIPMMLLLGGASrRINKANMIAFASLSHIVYFAGIalapnlwvLVP 314 Burkholderia sp. L...
SAK92533  251 AASATMIVLPLFvvhgMHGTRIDVSIMLGLGALLEIPMMLALGARAsRLDKQRWLASCAVVHLIYFIAVaaspnvhfLIP 330 Burkholderia sp. L...
AGZ43922  207 AMFAGGLALPLFvtreLDQSPTSIGVLFSVCAAVEVVATLGLALVPgRVSQRTVILGGFVSFVGYYALTvvstgmlmLVM 286 Actinoplanes friul...
OES46005  232 GEAARIAYLPLLavdhLGMSVFQFGLLMSVAPLTELFIMPLSGMLAdKFGLNKLLFAGILIGSFGFFLFasseaiwqVVL 311 Domibacillus sp. S6
ADF38342  235 GDSGRSMYLPLYitdtLKQSVSTVGILFTVTSVFELVFMPLGGYFSdKIGVKRFFIIGIACQVLYFILTslhlplsgLIV 314 Bacillus megateriu...
SEU45456  232 AMFSGAVVLPLYvtqgLGGSADTVGWMFSVCAAAEIPAALALLLPG-RWSRRRAILLGMALMTVHLALLavftstlaLVL 310 Nonomuraea wenchan...
OCJ02464  227 AMFMGSNALSIVvvndLGGSERDVGLMFSVCAAVEVVVMALFIVRPaKRASRPLLVAGFAIFASYFLSVallpmlsvFYG 306 Agrobacterium sp. ...
ODS86703  229 AIKVSGTATPLAmvshFGGNIGDVGIAAGIGALLEIPLMLAWGFLGrRFRKHTLIAAGALIYALYQVLLtqasgvteVFW 308 Devosia sp. SCN 66-27
AEV81106  223 TMVLGVQAMSLYvtddLHGSVGDTGLILGLCAALEIPLMLGFGALStRVPLRRLILGGGVAAVAYQTVAatahstgmLAT 302 Actinoplanes sp. S...
Feature 1            ##   #   #              #  ##  ##  #                                   
P31436    312 LQILNAIFLGILCGIGMLYFQDLMPekiGSATTLYANTSRVGWIIAGSVDGimveiWSYHALFWLAIGMLGIAMICLL 389 Escherichia coli K-12
SAL18108  315 LQILNAVVVAVTSCLGMSYFQELMPgalARATTLFFNTMRTGSVLAGVASGfvaatWGYRAVFVFCVMLASTASVVLF 392 Burkholderia sp. LMG...
SAK92533  331 MQAFNAFVVSVTSCLGMTYMQDLMPqspGSATALFFNASRVGSILSGVLSGvlvaaLGYRGTFLVCGCIALGAAVLFI 408 Burkholderia sp. LMG...
AGZ43922  287 AQVLRGVGIAIVAAAGIRYFQDLLApatGRATTLFANASTAGLLVSGILSGlavehLGYRTTLLLCGVAAALGGLTFA 364 Actinoplanes friulie...
OES46005  312 GQMMNACFISVIFGLSVTYAQQLIPgqaGLASSVFFSAQSASFIIGSLVGSygvhaIGLPFMFYIPSVICLFSCVLFV 389 Domibacillus sp. S6
ADF38342  315 LQVFYAFILSATMGVGMVYAQSLSPrqiGLATTAYMTAIQTSAVVSSLAMGslvsvIPLPSTFYILAVFSVISGVMFL 392 Bacillus megaterium ...
SEU45456  311 VHLARGVAIAVVGALGISHMQNLFPhapGRATTLFANTAAAGALMSGLAAGglsqvLGHHAALVCCAVVSAVAWLLFL 388 Nonomuraea wenchange...
OCJ02464  307 AQILRATGIGIISVVGMLLLQELMPeraGTASALFANATNAGWLVSGIATGgwaeiLGYRSIFGLCAALSLAAGALLV 384 Agrobacterium sp. 13...
ODS86703  309 LQVPRAVAIAVLMSVPISYMQEAIRgrvGLSTSLLDVTVVASGMLSAGIFGvvaapGRYLELFWVAAVLATCGAAVLL 386 Devosia sp. SCN 66-27
AEV81106  303 AQVLNAVFIATCSGLGISYVQDLMPahpGRATTMFTNAFPIGNILAAPLFGla-qeFGYRLAYTMNLILTVLGLLLLL 379 Actinoplanes sp. SE5...

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