Conserved Protein Domain Family
Josephin

?
pfam02099: Josephin (this model, PSSM-Id:396601 is obsolete and has been replaced by 460444)
Josephin
Statistics
?
PSSM-Id: 396601
Aligned: 69 rows
Threshold Bit Score: 73.4121
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002290359                    6 QIRQLCAIHAVNNLLQ----Lphdfvgaccdsdnahddsnininsgsqsntlnehtcdtvdvcksitrspqqgyitihkw 81  Thalassiosira pseudonana CCMP1335...
WGS:AAGF:cds.TTHERM_00825070A  66 QKMLFCAKHALNNLYQak-kF----------------------------------------------------------- 85  Tetrahymena thermophila SB210...
EXX65804                       20 QSLWFCGQHTLNNLLQgd-vF----------------------------------------------------------- 39  Rhizophagus irregularis DAOM 197198w...
XP_015628690                   36 QRLQFCLLHALNNLMQekesF----------------------------------------------------------- 56  Japanese rice...
KRH72659                       13 QRLQFCLVHALNSLFQqkdaF----------------------------------------------------------- 33  soybean...
CBI15994                       15 QRLQYCLLHALNNLFQekdiF----------------------------------------------------------- 35  wine grape...
XP_006361300                   17 QRLQFCLLHSLNNLFQgkdtF----------------------------------------------------------- 37  potato...
XP_009141012                   13 QRLQFCLLHSLNNLFQdkdaF----------------------------------------------------------- 33  field mustard...
O82391                         13 QRLQFCLLHCLNNLFQdkdaF----------------------------------------------------------- 33  thale cress...
XP_002525606                   20 QRLQFCLLHALNNLFQqkdeF----------------------------------------------------------- 40  castor bean...
XP_002290359                   82 tccgrivhhypyprrrrpsdvteqstrknaktarwysaTQSEFDDIATEFTLREralmtegdvsesfsdanNNADETLST 161 Thalassiosira pseudonana CCMP1335...
WGS:AAGF:cds.TTHERM_00825070A  86 --------------------------------------TSKDLDDICDQLTKTK-------------------------- 101 Tetrahymena thermophila SB210...
EXX65804                       40 --------------------------------------TREQLENIALKLA---------------------KQGGLTWR 60  Rhizophagus irregularis DAOM 197198w...
XP_015628690                   57 --------------------------------------TRAELDGIAGNLVQID-----------------PNKEHWTPM 81  Japanese rice...
KRH72659                       34 --------------------------------------TRAKLNAISERLTLED-----------------SNSETWTPL 58  soybean...
CBI15994                       36 --------------------------------------TRAKLNAIAEKLSLDD-----------------PNKETWTPL 60  wine grape...
XP_006361300                   38 --------------------------------------TRSDLNKIAEKLDVDD-----------------PNKGSWNPV 62  potato...
XP_009141012                   34 --------------------------------------TREGLDSISEVLGTDD-----------------PCQETWTPL 58  field mustard...
O82391                         34 --------------------------------------TKESLNSIAEKLETND-----------------PNKETWTPL 58  thale cress...
XP_002525606                   41 --------------------------------------TRPILDAIAEKLVLEC-----------------PDKQNWTPL 65  castor bean...
XP_002290359                  162 TksLSMMqKMSSQygtpyfGNYSLEVIQTALQRRGVEMsfFRVTddiNaSIniTDSiTSSenEKLVGFILHVqqeeertv 241 Thalassiosira pseudonana CCMP1335...
WGS:AAGF:cds.TTHERM_00825070A 102 YliYNPHrNIFKL------GNYDINVIDKALQNNGHTIqwFDMRkdvKeLNllEQK------NDIFGLILNVqykntfd- 168 Tetrahymena thermophila SB210...
EXX65804                       61 SyiFNPHkSIFGA------GNYDINVLEKALMNENLEVqwFDVR---KdIRsvIQF-TDE--T-LFGLILNVptlrf--- 124 Rhizophagus irregularis DAOM 197198w...
XP_015628690                   82 SliFKPHhNVFT-------GNYDVNVLITALEARKKKViwHDHR---KgASsiDLD-A----DALFGLMINVpvrrf--- 143 Japanese rice...
KRH72659                       59 SvlFKPHhNVLT-------GNYDINVLIAALEEKGKTVvwHDRR---KgASsiDVD-APE--DVLMGFVINVavtrf--- 122 soybean...
CBI15994                       61 SvlFKPHhNMIT-------GNYDINVLTAALEGKGKSAiwHDRR---NgASsiDLD-GAE--DTLMGIMLNIsvrrf--- 124 wine grape...
XP_006361300                   63 SlvFRPHhNEIT-------GNYDINVLIAALQQKAKTVvwHDKR---NgASsiGLD-GTD--DRLMGIVLNVpvtkf--- 126 potato...
XP_009141012                   59 SllLKPHhNRLT-------GNYDVNVMIAALEGKGKSVewHDKR---YgVYsiNL--GA---NTLMGIVLNVpvtry--- 120 field mustard...
O82391                         59 SfvLKPHhNTIT-------GNYDVNVMITALEGKGKSVvwHDKR---IgASsiDLD-DA---DTLMGIVLNVpvkry--- 121 thale cress...
XP_002525606                   66 SivFKPHhNSLT-------GNYDINVLISALEDKGKIVvwHDRR---NgASsiDLD---D--DNMFGIVLNVhvrry--- 127 castor bean...
XP_002290359                  242 ssylrsfgshlplvrnfcvgGKHWYVITrm--kyNsyqghglddrrtdpnatianessYKsdtlssssdgnsenDAWYLI 319 Thalassiosira pseudonana CCMP1335...
WGS:AAGF:cds.TTHERM_00825070A 169 --------------kiigcnTHHWLTIK------V-----------------------IN--------------NEIYNL 191 Tetrahymena thermophila SB210...
EXX65804                      125 ----------------ylwtSYHWIAIKpffidnK-----------------------LT--------------GV-YNL 150 Rhizophagus irregularis DAOM 197198w...
XP_015628690                  144 ---------------rglwtGRHWVAIR------S-----------------------IN--------------GTWFNL 165 Japanese rice...
KRH72659                      123 ---------------agiwrSRHWIALR------K-----------------------ID--------------GVWYNL 144 soybean...
CBI15994                      125 ---------------ggiwnGRHWFTLR------K-----------------------MG--------------GVWYNL 146 wine grape...
XP_006361300                  127 ---------------sglwrSRHWVTLR------C-----------------------IQ--------------GVWYNL 148 potato...
XP_009141012                  121 ---------------vglwrSRRWVVMR------K-----------------------IN--------------GVWYNM 142 field mustard...
O82391                        122 ---------------gglwrSRHWVVVR------K-----------------------IN--------------GVWYNL 143 thale cress...
XP_002525606                  128 ---------------aglwkSRHWVALR------K-----------------------IS--------------GIWYNL 149 castor bean...
XP_002290359                  320 DSNTDDVEKFEeYPQVLEYLRNVQSTGGLVF 350 Thalassiosira pseudonana CCMP1335
WGS:AAGF:cds.TTHERM_00825070A 192 DSKQNAAQIMS-NDDLYDFLLEVKKNNGQIL 221 Tetrahymena thermophila SB210
EXX65804                      151 DSKLSRAEKFEnVEEVYKFLESVVYQNGNIL 181 Rhizophagus irregularis DAOM 197198w
XP_015628690                  166 DSDFSAPKEFQdKEKLIAFLDSILSQGGEVM 196 Japanese rice
KRH72659                      145 DSDLTAPQPFFdTDKVREFLDSTLAHGGEVL 175 soybean
CBI15994                      147 DSDLKSPQSFKdVEEVKKFLDCIIGGGGEIF 177 wine grape
XP_006361300                  149 DSDFIAPYAFKdTQQLREFLDRIITAGAEVL 179 potato
XP_009141012                  143 DCDLTVPQPFTsEDEVKGFLDQNLSLGGEIL 173 field mustard
O82391                        144 DSDLVVPQLFRdDDEVRGFLDQNLSLDVIGL 174 thale cress
XP_002525606                  150 DSDLHEPLAFQdVDEVRGFLDYVIGQGGEIL 180 castor bean
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap