1HLV


Conserved Protein Domain Family
CENP-B_dimeriz

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pfam09026: CENP-B_dimeriz 
Centromere protein B dimerization domain
The centromere protein B (CENP-B) dimerization domain is composed of two alpha-helices, which are folded into an antiparallel configuration. dimerization of CENP-B is mediated by this domain, in which monomers dimerize to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation.
Statistics
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PSSM-Id: 462657
Aligned: 3 rows
Threshold Bit Score: 1e+06
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1HLV_A   1 MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGL 80 
P27790   1 MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGL 80  house mouse
P27790 499 PTLHFLEGGEDSDSDSDEEEDDEEEDEEDEDEEDDEDGDEVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDL 578 house mouse
1HLV_A  81 LIAWFQQIRAAGLPVKGIIL 100
P27790  81 LIAWFQQIRAAGLPVKGIIL 100 house mouse
P27790 579 VHVTRKNHARQAGVRGLGHQ 598 house mouse
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