3V48


Conserved Protein Domain Family
RutD

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TIGR03611: RutD 
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pyrimidine utilization protein D
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Statistics
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PSSM-Id: 211851
Aligned: 7 rows
Threshold Bit Score: 369.836
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3V48_A         4 KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQXAAELHQALVAAGIEH 83  Escherichia col...
WP_011266759   2 FHEFHACQHADAPTLVLSSGLGGSGRYWADDLTLLTRDYHVLVYDHAGTGRSPAVLPADYSIRHMAIELLALLDSLDIQR 81  Pseudomonas syr...
WP_032249358   2 KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEH 81  Escherichia coli
WP_010920638  13 HYELHGGPIAGREVVLLSSGLGGSGAFWAPQMQALTQRWPVVTYDHRGTGRSVRELPPRYTLAHMADDMVKVMDALGLAK 92  Caulobacter vib...
KEY55909       3 HFEVHGRTDAEAPTILLSSGLGGSSAYWLPQIEALSDHFRIVTYDHRGTGRTGGEVPTEGGISAMADDVLEIVSALNLEK 82  Agrobacterium t...
WP_003606168   6 HHEVHGP--EGGRKVLLSPGLGGSAHYFAPQVPVLAERFRVVTYDHRGTGRSPGPLEPGHDIAAMARDVLDLLDHLDIGT 83  Methylobacteriu...
WP_004930959   2 NYQLFKHSDENASYVVFSSGLGGHGSFWQAQLDVFRQYFHVLIYDQEGCHASSELLADGYSFEHLALQVKQLLQQLNIVR 81  Acinetobacter
3V48_A        84 YAVVGHALGALVGXQLALDYPA---SVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWXAARA 160 Escherichia col...
WP_011266759  82 CHFMGHALGGLVGLELALLRPE---LLHSQVLINAWSSPNPHSARCFSVRKKLLLNSGPEAYVQAQALFLYPADWIAANG 158 Pseudomonas syr...
WP_032249358  82 YAVVGHALGALVGMQLALDYPA---SVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARA 158 Escherichia coli
WP_010920638  93 AHVVGHAAGGNAGLQLALDHPD---RLAKLVVVNGWSRPDPHIRRCFDTRLHLLNDTGPEAYVHAQPIFLYPADWISRNH 169 Caulobacter vib...
KEY55909      83 FHFMGHALGGLIGLDIALRQPR---LIDRLVLINAWSKADPHSGRCFDVRIELLEKSGVDAFVKAQPLFLYPAAWMSEHQ 159 Agrobacterium t...
WP_003606168  84 ADIVGHALGGLIALQLALTHPE---RVGRIVVINGWAAMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWLSENA 160 Methylobacteriu...
WP_004930959  82 FHFIGHALGGFIGIELAHRYASetcQLLSLTLINAWQQLDPHTLRCFTTRIALLQHAGTAAYLHAQALFLYPPLWISEHT 161 Acinetobacter
3V48_A       161 PRLEAEDALALAHFQGKNNLLRRLNALKRADFS-HHADRI-RCPVQIICASDDLLVPTACSSELHAALPDSQKXVXPYGG 238 Escherichia col...
WP_011266759 159 PRLADDEAHALAHFPDTDNLLRRIHALETFDVS-AELSRI-HTPTLLIANRDDMLVPWQQSRHLANALPNATLVLLEYGG 236 Pseudomonas syr...
WP_032249358 159 PRLEAEDALALAHFQGKNNLLRRLNALKRADFS-HHADRI-RCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGG 236 Escherichia coli
WP_010920638 170 TRLMAEEAHHVAAFPPREVMLARINALLAFDID-ARLEDI-THRVLISASADDMLVPMSCSQRLAGRLPNADFQQVAWGG 247 Caulobacter vib...
KEY55909     160 ERLARDDAHGVAHFQGKTNVLRRIAALRAFDID-ARLGEI-GNPVLVVATKDDLLVPYTRSLRLAEGLPQSELCLLDFGA 237 Agrobacterium t...
WP_003606168 161 ARLADDEAQALAHFAGTRTVLTRIAALETFDAT-AALGRI-PHETLLMAARDDVLVPFTASDILAAGLPNARLDLAPEGG 238 Methylobacteriu...
WP_004930959 162 ALLEQQEAKMQSDFPPHANVLKRLNALMQYQVNtARIDTLkQLPVCLIANQDDMLVPYVQSLNLWKKLPDAQLKLLPYGG 241 Acinetobacter
3V48_A       239 HACNVTDPETFNA 251 Escherichia coli SE11
WP_011266759 237 HASNITDPLPFQR 249 Pseudomonas syringae
WP_032249358 237 HACNVTDPETFNA 249 Escherichia coli
WP_010920638 248 HGFTVTDPETFNE 260 Caulobacter vibrioides
KEY55909     238 HAVNITEPDLFNT 250 Agrobacterium tumefaciens
WP_003606168 239 HAHSATRPEAFNR 251 Methylobacterium extorquens
WP_004930959 242 HASTVTEARQVNQ 254 Acinetobacter
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