Conserved Protein Domain Family
Fib_succ_major

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TIGR02145: Fib_succ_major 
Fibrobacter succinogenes major paralogous domain
This domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron. [Cell envelope, Other]
Statistics
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PSSM-Id: 273995
Aligned: 25 rows
Threshold Bit Score: 175.566
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014546288 313 TMIDPRDKQVYKVVKIEvkehdySQVWMAENLNYA------DSvktpslkgQN--------WC--YNNDEKNCKVSGRYY 376 Fibrobacter suc...
WP_014546291 326 SVVDSRDGQIYKTVKIG------SQTWMAENLNYA------DSvqtpsllgRS--------WC--FANKPENCAMAGRLY 383 Fibrobacter suc...
WP_012820400 452 SVVDSRDGQTYKTTKIG------NQVWMAENLNYK------TA--------GS--------FC--YHDSTQYCELYGRFY 501 Fibrobacter suc...
WP_012820400 248 QFVDIRDGNVYKMVTYG------KQTWMAEDLAYK------AE------------------HD--DECLRYYCGDYG-SY 294 Fibrobacter suc...
WP_012820187 152 fFTDPRDGQKYPVVVIG------SRVWMAANLNYK------TA--------ES--------HC--HGDYEHNCEKYGRLY 201 Fibrobacter suc...
WP_014545242 100 vLVDSRDNSEYKTIGIG------NQVWMAENLNYE------VE--------PS--------WC--YGDSLEYCEKYGRLY 149 Fibrobacter suc...
WP_012820183  81 TMVDERDCRTYKTITIG------TQTWMAENLKFEykvdgkTY--------GN--------SC--NPDS---CETFGRHY 133 Fibrobacter suc...
WP_014545118  45 KIIDPRDNNSYGVALIG------DLYWMTENLRYA------DS--------VStknlagntWC--HEDDAK-CEKYGRLY 101 Fibrobacter suc...
WP_014546429 141 DLVDERDSAIYRTVVVG------SQTWMRDNLRLD------VE--------GS--------SC--AWDS---CGKYSREY 187 Fibrobacter suc...
WP_015732014  30 TFVDTRDGTEYKTCKIG------KQVWLAENLKFE------LD--------SD--------DCvaYDDDYQYFDKYGYLY 81  Fibrobacter suc...
WP_014546288 377 TWAAAIDsvalandsknplncgygktcginrgvqgICPDGWHLPTLHEWGLLGVALGN---AGV------AGDSLKALTG 447 Fibrobacter suc...
WP_014546291 384 TWTAAVDsvnlatdkdnpqdc-gyeklcnlskirgICPEGFHLPDTTEWRTLISFAGG---DHI------AGGKLESRLG 453 Fibrobacter suc...
WP_012820400 502 TWASAMDsvgafsvngkgcg--sgtscppnfpvrgVCPEGFHLPTLAEWKSLVATAGGe---yD------AASKLMSAKK 570 Fibrobacter suc...
WP_012820400 295 TWKIAMGdaysqkn--------------rtrpvrgICPIGWHLPDTTEWNTLISVLGGk----------------TAACD 344 Fibrobacter suc...
WP_012820187 202 SWKDAED----------------------------ACPEGWDIPSYAEWVALNKFIGEeyyGVNdffafpSAKMLISVTG 253 Fibrobacter suc...
WP_014545242 150 QWDGILGasak---------------------venVCPEGFHVPSNKEWDELNAFVNLwf----------hGNSYSARKV 198 Fibrobacter suc...
WP_012820183 134 TWAAAMDsavvftndsencg--ygvtcsptypvpgICPEGWHIPDSTEWVEFYKILNEdphAMQ------AEDFIRSKSA 205 Fibrobacter suc...
WP_014545118 102 SWTAALDydkkfnsas----------vgyvsstkgICPNGWRIPSGNDWLSLVNYVETnngGEG------SGTSLKSTET 165 Fibrobacter suc...
WP_014546429 188 TWALAMTs----------------------------CPKGTHLPSKDEFKILFDYVDAingDT--------PIGMDLRSR 231 Fibrobacter suc...
WP_015732014  82 SENGLEEa---------------------------I-PEGWHLPTRKEWETMIRFAKKdsrCKD-------VLSVIASDE 126 Fibrobacter suc...
WP_014546288 448 WDYAGtadnN---------GVDAYGFAALPTGr-MVSTSS-WS------------------NV--GSNVYYWSSEEDGT- 495 Fibrobacter suc...
WP_014546291 454 MYR-D----P---------GTDDYGFSAFPAGn-KYRDRE-FF------------------ED--SRDVYFWLLTEYSD- 496 Fibrobacter suc...
WP_012820400 571 LEKGFdwveE---------GTDDYGFSAYPSCn-MERDGT-SG------------------FC--NPPVNYWSSIESST- 618 Fibrobacter suc...
WP_012820400 345 IFES----------------KADNGFSMVANGnsLLCTED-GV------------------ESvcAESAFYWSSDKGNEd 389 Fibrobacter suc...
WP_012820187 254 WDYTK----Y---------GIDAFGFSVLPAGk-GYYIPP-RYvggkliyeertvyedhkgDK--SERAYFWSSSQVNG- 315 Fibrobacter suc...
WP_014545242 199 LLSSD----PkefdnivhvGDDLVGFTGIYAGh-RTANGF-FT------------------GR--LTSAYFCSADMNEE- 251 Fibrobacter suc...
WP_012820183 206 IRKGL----V---------ATNASGFSALYETl-SLVAG----------------------HT--ASGAFFWSSTDYIT- 246 Fibrobacter suc...
WP_014545118 166 WSASD----Evr------kPTNRFGFGAKASGr-RNNDGEtFM------------------ST--GRIAFFWSSNEHDN- 213 Fibrobacter suc...
WP_014546429 232 VYIGD----Y---------RDHGLDFFGFDAQg-STAYG----------------------------AAEYWTSDEIDD- 268 Fibrobacter suc...
WP_015732014 127 WIKS---------------SSDKYGFSMVAGGm-RDCGDD-FD------------------LL--DFSAHFWCVENERR- 168 Fibrobacter suc...
WP_014546288 496 YEARYSNI----NNIY-TKFYLFQGS---K-KYGQSVRCIKG 528 Fibrobacter succinogenes
WP_014546291 497 DDHLAYWS----VFFY-ETFNFSGGF---K-DMGVPVRCVMD 529 Fibrobacter succinogenes
WP_012820400 619 DEAYHMSLqnsnNYNG-KGIQFSGIE---K-HHAFTIRCVKD 655 Fibrobacter succinogenes
WP_012820400 390 DYALGMRL----DVYV-NGKKEVGIDsglK-REDMPIRCVKD 425 Fibrobacter succinogenes
WP_012820187 316 NE-NKMYV----EH-G-PAMDLYPES---K-EMWLSVRCIKD 346 Fibrobacter succinogenes
WP_014545242 252 GSAYIYML----RQDE-FDLTKYAQK---T-TSNCNVRCVKD 284 Fibrobacter succinogenes
WP_012820183 247 SRAYYWHV----SESEaRLDNNKICD---K-GTGMAVRCIKD 280 Fibrobacter succinogenes
WP_014545118 214 GTAEGWQL----RHDV-GVIQLGNFY---K-DHGLAVRCVAN 246 Fibrobacter succinogenes
WP_014546429 269 DVAVYVYI----R----DPYFFTDEE---K-TDSYPVRCILD 298 Fibrobacter succinogenes
WP_015732014 169 YSSV---------SFE-DGVDEIDDE---EvPCYASVRLIKD 197 Fibrobacter succinogenes
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