Conserved Protein Domain Family
SwrA

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pfam17423: SwrA 
Swarming motility protein
This domain family is found in Bacillus. Members of this family are Swra proteins involved in swarming motility (a multicellular movement of hyper-flagellated cells on a surface). SwrA is a key transcription factor facilitating this cascade. It acts synergistically with DegU to drive the fla/che operon encoding flagella components, chemotaxis constituents and the alternative sigma factor sigmaD, which is regarded as the primary event in the development of motility. LonA protease of Bacillus subtilis inhibits SwrA by proteolytically restricting its accumulation. SwrA does not contain any known DNA binding domain, and it has been shown to interact with the N-terminal domain of DegU. Anecdotally, in most laboratory strains, e.g. 168, the swrA coding sequence contains a nucleotide insertion that prematurely interrupts its reading frame, causing a non-swarming phenotype strain.
Statistics
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PSSM-Id: 407493
Aligned: 2 rows
Threshold Bit Score: 221.48
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q62PV3   1 MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVEDINEDCAELYFNYLMDNHKRLGINLT 80  Bacillus licheniformi...
Q62PV3   1 MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVEDINEDCAELYFNYLMDNHKRLGINLT 80  Bacillus licheniformi...
Q62PV3  81 DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE 116 Bacillus licheniformis DSM 13 = ATCC 14580
Q62PV3  81 DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE 116 Bacillus licheniformis DSM 13 = ATCC 14580
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