1JK0,6EBP,2BQ1,4D8G


Conserved Protein Domain Family
Ribonuc_red_sm

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pfam00268: Ribonuc_red_sm 
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Ribonucleotide reductase, small chain
Statistics
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PSSM-Id: 425568
Aligned: 268 rows
Threshold Bit Score: 163.055
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JK0_B           34 RFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQ---KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQN 110 baker's yeast
AGA33976         91 LNQLVPFKYKWAWQKYLDGCANHWMPQEINMNADIALWKdpnGLTEDERIIVKRNLGFFSTADSLVANNLVLAVYRHITN 170
Q5ZUL8           58 LNQLVPFKYKWAWDKYLTACANHWMPNEISMSADVALWKdpyGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITN 137 Legionella p...
Q21HW0          102 LNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADVATWKspdGLSEDERRIIMRSLGYFSTADSLVANNLVLAIYRHITN 181 Saccharophag...
Q0VRP0          109 LNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADLALWKkadGLTDDERRIVKRNLGFFATADSLVANNLVLAIYRLITN 188 Alcanivorax ...
Q88NN0           95 LNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKsqdGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITN 174 Pseudomonas ...
WP_013292360     45 VNQLVPFKYKWAWEKYLAACANHWMPQEVNMTADIALWKs-dKLSDDERRLIKRNLGFFTTADSLAANNIVLGSYRHITN 123 Gallionella ...
jgi:Msip34_1088  62 VNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWKdssALTEDERLIVKRNLGFFTTADSLAANNIVLGTYRHITA 141
Q21T46           79 VNQLVPFKYKWAWEKYLSSCANHWMPQEVNMTRDIALWKdpnGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITA 158 Rhodoferax f...
WP_013966167     77 VNQLVPFKYKWAWDKYLGACANHWMPQEISMSRDISLWKdpnGLTEDERRLIKRNLGFFVTADSLAANNIVLGTYRHITN 156 Nitrosomonas...
1JK0_B          111 PEGKSFYGFQIMMENIYSEVYSMMVDAFFkdpKNip-lFKEIANLPEVKHKAAFIERWISNdDsL-------------YA 176 baker's yeast
AGA33976        171 PECRQYLLRQAFEEALHTHAYQYCVESLG---LDegeiFNMYREVPSVARKAEWALPFTRHlA-DphfhtgtpeddqkLL 246
Q5ZUL8          138 PECRQYLLRQAFEEALHTHAYQYIIESLG---LDeaevFNMYREIPSVSRKAVWALPFTQSlG-DetfhtgtpendqrLL 213 Legionella p...
Q21HW0          182 PEARQYLLRQAFEEAIHTHAYQYCIESLG---MDegevFNMYREVPSVAKKAAWSIAHTQGmS-DptfktgtpeadqeLL 257 Saccharophag...
Q0VRP0          189 PECRQYILRQSFEEAIHTHAYQYCIESLG---MDegeiFNMYQEIPSVAKKAQWGIQYTRDlS-DpefttgtpetdkaLL 264 Alcanivorax ...
Q88NN0          175 PECRQYILRQAFEEAIHTHAYQYCIESLG---MDegeiFNMYHEIPSVAKKAAWGLKYTRAiS-DpefntgtvetdkeLL 250 Pseudomonas ...
WP_013292360    124 PECRQFLLRQAFEEAIHTHAYQYIVESLG---LDegeiFNMYHEVPSIRNKDEFLLPYIDVlT-NpefktgtpeadqaLL 199 Gallionella ...
jgi:Msip34_1088 142 PECRQYLLRQAFEEAIHTHAYQYIVESLG---LDeseiFNAYQEVSSIRDKDDFLIPFINTlT-DpefktgttqadqqLL 217
Q21T46          159 PECRQFLLRQAFEEAIHTHAYQYIVESLG---LDeseiFNAYNEVQSIRDKDEFLIPFIEAiM-DpafktgtheadqtLL 234 Rhodoferax f...
WP_013966167    157 PECRQYLLRQAFEEAIHTHAYQYIVESLG---LDegeiFNAYHEVASIRDKDEFLIPFIDTlT-DphfktgtqetdqqLL 232 Nitrosomonas...
1JK0_B          177 ERLVAFA-AKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHL--R-----TKPNPKIIEKIIT 248 baker's yeast
AGA33976        247 RELIAFYvIFEGIFFYVGFVQILSMGRRNKMTGVAEQFQYILRDESMHMNFGIDVINQIkiEnpqlwTPEFKQEMADMIR 326
Q5ZUL8          214 RDLIAFYvVFEGIFFYVGFTQILSMGRRNKMVGTSEQFQYILRDESMHMNFGIDVINQIkiEnphlwTPEFKNEMIQLIR 293 Legionella p...
Q21HW0          258 RNLIGFYvITEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIklEnphlwTEEFQAETKQMIL 337 Saccharophag...
Q0VRP0          265 ENLIAFYcVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHVNFGIDVINQIklEnphlwDAQMRDKATQMIL 344 Alcanivorax ...
Q88NN0          251 RNLIAYYcVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIkiEnphlwDAAMKEEATQMIL 330 Pseudomonas ...
WP_013292360    200 RSLIVFAcIMEGLFFYVGFVQILALGRQNKMTGAAEQYQYILRDESMHLNFGVDLINQIkmEnphlwTAAFREEIRGLMQ 279 Gallionella ...
jgi:Msip34_1088 218 RSLIVFAcIMEGLFFYVGFVQILALGRQNKMQGAAEQYQYILRDESMHCNFGIDLINTLklEnphlwTPEFREEIKRLMQ 297
Q21T46          235 KSLIVFAcLMEGLFFYVGFAQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQLklEnpqlwTSEFKAEIKALFE 314 Rhodoferax f...
WP_013966167    233 KSLIVFAcIMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDVINQIkmEnphlwTKAFRDEINELMH 312 Nitrosomonas...
1JK0_B          249 EAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNA-VNP 300 baker's yeast
AGA33976        327 EAVELEAQYARDTMPRGVLGMNAGMFEEYLHFIANRRCAQIGLPELYPGaDNP 379
Q5ZUL8          294 EGVELEYQYARDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGaENP 346 Legionella pneumophila subsp. pneumophi...
Q21HW0          338 EGTELEIAYARDTMPRGVLGMNAAMMEEYLHFIANRRMAQLGLAEAYPGaKNP 390 Saccharophagus degradans 2-40
Q0VRP0          345 EGTELEIQYARDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGvNNP 397 Alcanivorax borkumensis SK2
Q88NN0          331 QGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGtTNP 383 Pseudomonas putida KT2440
WP_013292360    280 KGVELEYAYAEDTMPRGILGLNATMFKEYLRFIANRRCQQIGVDILYQGaTNP 332 Gallionella capsiferriformans
jgi:Msip34_1088 298 QAVELEYRYAEDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGaSNP 350
Q21T46          315 QAVELEYRYAEDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNeENP 367 Rhodoferax ferrireducens T118
WP_013966167    313 KAVALEYRYAEDTMPRGVLGMNAPMFKEYLRYIANRRCQQIGLDILYPNaNNP 365 Nitrosomonas sp. Is79A3
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