3TQM,2YWQ,6DZK


Conserved Protein Domain Family
Ribosomal_S30AE

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pfam02482: Ribosomal_S30AE (this model, PSSM-Id:396854 is obsolete and has been replaced by 460569)
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Sigma 54 modulation protein / S30EA ribosomal protein
This Pfam family contains the sigma-54 modulation protein family and the S30AE family of ribosomal proteins which includes the light- repressed protein (lrtA).
Statistics
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PSSM-Id: 396854
Aligned: 814 rows
Threshold Bit Score: 34.0295
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3TQM_C           3 IQXTGQGV-DISPALRELTEKKL-HRIQpc-rdEIs-----NIHIIFHinkl-----kkiVDANVkLP---GSTIN--Aq 64  Coxiella burn...
WP_014395149     3 VQLRGVHL-GLTDNLKQYVDTHLvAHIE-----RFaedeasEIEIALVdingpkggvdkeCRVTVrMPgleAVHVTetS- 75  Corallococcus...
Q2IHD0          36 LVIHSHHL-TLPPDLGAFLRKHVtRPLA-----RLqddsasELSVHLGdarrkkggvdqeCRLSFrMPgarTLHVEsvQ- 108 Anaeromyxobac...
tum:LSA_05070   12 YNLRGDDV-EITDNLRSYVTDQI-AKLDpy-faEGv-----NAVAHVNlfgfk--ngnvkAEITIiFPf-----LLlhGe 76  Lactobacillus...
ESQ12884         3 VRISGD-TlALDRKIVRRIER-HtQALEksfpsQEf-----EICARIAeefdslkghrvrCELVTtTPerqQVIVReaH- 74  uncultured Th...
jgi:Thimo_1610   3 IRISGD-MlALDASIRSIIEQ-QaERLAarfpdRKi-----RTEARILeefdpvrghrvrCELRIdLPnrrQMVVReaR- 74  Thioflavicocc...
WP_005222736     3 IKIGGD-TlALDADIRRQIES-EaKKLEdrftdERi-----ETQATIKeefdrlhghrvrCELRIkLAqgrQLVVRdaS- 74  Marichromatiu...
WP_014777083     3 mKIGGD-TlALDADIRRQIES-EaMKFAarfpdGQv-----DAQVTIQeefdplhghrvrCELSAkVGagrQVVVRdaR- 74  Thiocystis vi...
WP_012969707     3 lKIGGD-MlALDAAIRRQIET-EaRKLTdrfpgEPi-----EAQVNVQeefdqlhghrvrCELSAkLGagrQVVVReaR- 74  Allochromatiu...
WP_015799157     3 vdLRCRGC-TLTEQQRAHVEDRI-ARLE-----KYlga-peRVEVHVEragnp---anpdRVVTEvTYvvsKAVVR--Ar 69  Acidimicrobiu...
3TQM_C          65 aESDDXYKTVDLLXHKLETQLSKYKAKKG 93  Coxiella burnetii
WP_014395149    76 ---ETLFQAIDATRDRLERAIKRAVERRR 101 Corallococcus coralloides
Q2IHD0         109 ---DDLHTALLDAAERLKRLVKRELEKMR 134 Anaeromyxobacter dehalogenans 2CP-C
tum:LSA_05070   77 aSGSEYHESVAAAITHIKERIEKYQNRIN 105 Lactobacillus sanfranciscensis TMW 1.1304
ESQ12884        75 ---KKPEDAIDSAFAGLKPKLRRLRSRSl 100 uncultured Thiohalocapsa sp. PB-PSB1
jgi:Thimo_1610  75 ---RDAAEAVAAAFAAAKPQLRRLNrptl 100 Thioflavicoccus mobilis 8321
WP_005222736    75 ---KTAVEAITGVFGAARRSVRRVRwqgv 100 Marichromatium purpuratum
WP_014777083    75 ---KTANEAIREVFNAAGRNVRRLRRQhi 100 Thiocystis violascens
WP_012969707    75 ---KVASEAISEVFTAARRNVRRLRcqsv 100 Allochromatium vinosum
WP_015799157    70 gVGETELESFDRAEERLKRRLERLKGRLV 98  Acidimicrobium ferrooxidans
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