Conserved Protein Domain Family
CybS

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pfam05328: CybS (this model, PSSM-Id:368389 is obsolete and has been replaced by 461624)
CybS, succinate dehydrogenase cytochrome B small subunit
This family consists of several eukaryotic succinate dehydrogenase [ubiquinone] cytochrome B small subunit, mitochondrial precursor (CybS) proteins. SDHD encodes the small subunit (cybS) of cytochrome b in succinate-ubiquinone oxidoreductase (mitochondrial complex II). Mitochondrial complex II is involved in the Krebs cycle and in the aerobic electron transport chain. It contains four proteins. The catalytic core consists of a flavoprotein and an iron-sulfur protein; these proteins are anchored to the mitochondrial inner membrane by the large subunit of cytochrome b (cybL) and cybS, which together comprise the heme-protein cytochrome b. Mutations in the SDHD gene can lead to hereditary paraganglioma, characterized by the development of benign, vascularised tumors in the head and neck.
Statistics
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PSSM-Id: 368389
Aligned: 35 rows
Threshold Bit Score: 120.422
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6CIP1        38 FAKYKLIPP---PPGGVTGNVNDNL-PKTEPNWFHGSYHWDYERITAVSLVPLTMVPLYGaMSsaTfasgfpFPVIDSLL 113 Kluyveromyces l...
Q17IC3        11 YKKFTTIPRsyqIRLFCQQSSSPKTkWRPSLGSSNYANHWRLDRAFSWILLGVLPLGLTY-----P------CKALDVII 79  yellow fever mo...
Q0U9E4        61 TQRNQILPP---LPQKIEGTTNDPT-PVPNPDYSHGSYHWSFERIISAGLVPLTLAPFAA-GS--L------NPVTDSIL 127 Parastagonospor...
Q4WRP4        37 SAKKQILPP---LPQVIQGTMNDPA-PIPKPHPSEGSYHWTFERLVSVGLIPLTIAPFAA-GS--L------NPVMDSVL 103 Aspergillus fum...
CAK37397      92 RSRSCLLCL--------LDAVNDPA-PIPKSHPTEGSYHWTFERIVSAGLVPLCIAPFAA-GS--M------SPVMDAVI 153 Aspergillus niger
EHA48766      38 ssRRNLLPP---LPQKIQGTVNDPA-PVPSPSPSHGHYHWTFERILAAGLVPLTVAPFAA-GS--F------NPVMDAVL 104 Pyricularia ory...
Q7SGY6        33 TSRKSLLPP---PPQRIEGTVNDPV-EVPPPSPSHGSYHWTFDRVVAAGLIPLTVAPFAA-GS--L------NPTMDAVL 99  Neurospora cras...
Q2HDF4        40 TARRDLLPP---LPQHVDGTVNDAA-PVPEPSPSHGSYHWTFDRLVAASLVPLTVAPFAA-GS--L------NPTLDAFL 106 Chaetomium glob...
XP_001542173  70 TSRRDLLPP---PRQTIQGTMNDAA-PIPPTSPSHGSYHWTFERSVAVALVPLTIAPFAG-GS--V------YPVMDAVI 136 Histoplasma cap...
Q9P7X0        26 TSVAKIFPP---PPQTIKGTVNDAA-VFPHHSKLHGSYHWDFERIIAIAMVPQVMIPLFT-GT--S------HPLMDAAL 92  Schizosaccharom...
Q6CIP1       114 ASTILIHAYLGITSCIIDYIPKRKFG-FWHKAAKFALALGSSFSLYGIYVLETENNGLIDLVSTLWD 179 Kluyveromyces lactis
Q17IC3        80 AICVVGHQQTGLSSVVTDYVRKDLLRgMATKAAHGVTAGLSVATLVGLLYLTFADIGITETVRRIWA 146 yellow fever mosquito
Q0U9E4       128 CALLVVHSHIGFESCIIDYFPKKRIP-KLRAAAHWALRISTLLLGVALYSFETNDVGITEAVSRVWH 193 Parastagonospora nodorum SN15
Q4WRP4       104 CALLVLHSHIGFHASIIDYFPKRRVP-KTKTFLDWLLRAFTVTTAVGLYEFETNDVGITEAIKRVWK 169 Aspergillus fumigatus
CAK37397     154 CSAIVVHSHIGFHASITDYFPTRRVP-KTHTFMIWLLRAFTLSTAVGLYEFETNDVGVTEALRRVWN 219 Aspergillus niger
EHA48766     105 CSTLLLHSHLGLQNVITDYLPQKRVP-KSRKAAMWLLNLATAVVGVGLYEFETNDVGLTEGVRRIWT 170 Pyricularia oryzae 70-15
Q7SGY6       100 AATILIHSHTGFGNIIVDYVPSKRVP-KARKVFTWGLNAATVLVGLALYEFETTDVGLTETIKRVWK 165 Neurospora crassa OR74A
Q2HDF4       107 CATILIHSHTGFQNVIIDYLPKKRVP-RTRKAFMWGLNAATAVVGLALYEFETTDVGITETIKRIWT 172 Chaetomium globosum CBS 148.51
XP_001542173 137 CGTLLMHSHIGFQACIIDYIPAWRMP-KARKAFDWLLRIMTLVTAVGLYEFETNDIGMTEAIKRIWK 202 Histoplasma capsulatum NAm1
Q9P7X0        93 ACTLITHAHLGFESCVIDYFPARRFK-KLSPLMHWILRGCTVLTLIGVYEFNTNDIGLTEGIKKLWK 158 Schizosaccharomyces pombe 972h-
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