1AKO


Conserved Protein Domain Family
XthA

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COG0708: XthA (this model, PSSM-Id:223780 is obsolete and has been replaced by 440472)
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Exonuclease III [Replication, recombination and repair]
linked to 3D-structure
Statistics
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PSSM-Id: 223780
Aligned: 65 rows
Threshold Bit Score: 208.992
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AKO       1 MKFVSFNINGLRARPHQ--------LEAIVEK----HQP-DVIGLQETKVHDDMFPLEEVA--KLGY-NVFYHGQ--KGH 62  Escherichia coli
19551901   3 FHITSVNVNGIRAAVKQrset-nlgFLPWLEE----TRP-DVVLLQEVRASEKDTATALQPalDNGWhYIGAPAAa-KGR 75  Corynebacterium glu...
15805383  35 LKVTTFNVNGLRSALRKg-------LADWVES----NQP-DVLLLQEVRAEPMP---DALP----GYhSAWFPAQk-AGY 94  Deinococcus radiodu...
19074386  18 MRITSFNVNGIRSFSKYvmkscrlrFNEYVKN----ILRaDILCVQETRGREGALGEFHS---LRDYiTFTNTNKtnSSR 90  Encephalitozoon cun...
15793359   2 LKIISANVNGIRSAYKKg-------FYEYIAA----SGA-DIVCVQELKAQEADLSADMKN--PHGMhGHWHCAEk-RGY 66  Neisseria meningiti...
15677903   2 LKIISANVNGIRSAYKKg-------FYEYIAA----SGA-DIVCVQELKAQEADLSADMKN--PHGMhGHWHCAEk-RGY 66  Neisseria meningiti...
15600525   1 MRIISVNVNGIQAAAERg-------LLSWLQA----QNA-DVICLQDTRASAFDLDDPSFQ--LDGYfLYACDAEl-PEQ 65  Pseudomonas aerugin...
17544859   2 LRIISANLNGVRSAASKg-------FFEWMGK----QDA-DFVCVQELKCAQDDMTPEFLA--PHGYhGVFQHAVk-KGY 66  Ralstonia solanacearum
19112314   1 MRILSWNVNGIQNPFNYfp-----wNKKNSYKeifqELQaDVICVQELKMQKDSFPQQYAV--VEGFdSYFTFPKirKGY 73  fission yeast
15836769   1 MRISSFNANGLRSALSKg-------FFDWFST----QDI-DVLCVQETKAQRQQLVGPDFF--PAGYhVCFRDATtkKGY 66  Xylella fastidiosa ...
1AKO      63 YGVALLTKETPI-----AVRRGFPG--------------------------------DDEEAQRRIIMAEIPSll----- 100 Escherichia coli
19551901  76 AGVGILSRHELE-----DVNIGFGS----------------------------------FLDSGRYIEATIKDttl---d 113 Corynebacterium glu...
15805383  95 SGVAILSRLPLK-----DVRLGMPH--------------------------------DEMDAEGRVVSAVVAG------- 130 Deinococcus radiodu...
19074386  91 SGVSTMVSKKLYcrgvlDSPFAEDGrs-----------------------------lLTDHGEFKVLNLYFPFfdesser 141 Encephalitozoon cun...
15793359  67 SGVAVYSKRKPd-----NVQIGMGIe-------------------------------E-FDREGRFVRCDFGR------- 102 Neisseria meningiti...
15677903  67 SGVAVYSKRKPd-----NVQIGMGIe-------------------------------E-FDREGRFVRCDFGR------- 102 Neisseria meningiti...
15600525  66 GGVALYSRLQPK-----AVISGLGF--------------------------------ETADRYGRYLQADFDK------- 101 Pseudomonas aerugin...
17544859  67 SGAGLYARHQPd-----DVIVGFDGg-------------------------------E-FDAEGRYVEARYGK------- 102 Ralstonia solanacearum
19112314  74 SGVGFYVKKDVAip--vKAEEGITGilpvrgqkysyseapehekigffpkdidrktaNWIDSEGRCILLDFQM------- 144 fission yeast
15836769  67 SGVAIYSRCEPd-----ELRTTLGWa-------------------------------E-FDEEGRYVEARFGN------- 102 Xylella fastidiosa ...
1AKO     101 gnVTVINGYFPQGESR----DHPIk--FPAKAQFYQNLQNYLETELKRD--NPVLIMGDMNISPTDLDIGIGEen--rKR 170 Escherichia coli
19551901 114 vpVTVASLYLPSGSA-----GTDK---QDEKYRFLDEFEGFLDQRAKER--SHMVIGGDWNICHRREDLKNWK------- 176 Corynebacterium glu...
15805383 131 --VRFVSVYLPSGSS-----GEAR---QGFKDRVLADYQAWVSELLAAG--EPVVIGGDYNIAHREIDLKNWR------- 191 Deinococcus radiodu...
19074386 142 dkSEVIGFYDAIGEFIrghdNIIMcgdFNAVYSIIDHYQFYSELLRIQRkdRPGLEEGAKERRRARKSPTRLElpyefYA 221 Encephalitozoon cun...
15793359 103 --LSVISLYLPSGSS-----AEER---QQVKYRFLDAFYPMLEAMKNEg--RDIVVCGDWNIAHQNIDLKNWK------- 163 Neisseria meningiti...
15677903 103 --LSVISLYLPSGSS-----AEER---QQVKYRFLDAFYPMLEAMKNEg--RDIVVCGDWNIAHQNIDLKNWK------- 163 Neisseria meningiti...
15600525 102 --VSIATLLLPSGQS-----GDES---LNQKFKFMDDFTHYLSKQRRKR--REYIYCGSLYVAHQKMDVKNWR------- 162 Pseudomonas aerugin...
17544859 103 --LSIISVYVPSGSS-----GEER---QQAKYRFMDLFMQHLTDLRHEKg-REVVLCGDVNIVHKEIDIKNWK------- 164 Ralstonia solanacearum
19112314 145 --FILIGVYCPVNS------GENR---LEYRRAFYKALRERIERLIKEGn-RKIILVGDVNILCNPIDTADQK------D 206 fission yeast
15836769 103 --LSVVSFYIPSGSS-----GEQR---QHYKFEVMRWLRPILCEWLLSg--RDYVLCGDWNIVRSALDIRNWK------- 163 Xylella fastidiosa ...
1AKO     171 WLRTGKCSFLPEEREWMD-----------RLMSWG---------------------LVDTFRHANPQTADrFSWFDYRSK 218 Escherichia coli
19551901 177 -TNQKKSGFLPDERAFMDsvfgtfpdeatQVAGAGdffgavdyegtrrreattdpaWFDVARRLQPEGDGpYTWWTYRGK 255 Corynebacterium glu...
15805383 192 -SNQKNSGFLPHERTWMT-----------AHLAAG---------------------LVDCHRDCLGEEAE-YTWWSNRAN 237 Deinococcus radiodu...
19074386 222 EDALESYLLETEQRKWLR-----------SLIDGGe--------------------YIDAYRALCKRPES-YTCWNTMLN 269 Encephalitozoon cun...
15793359 164 -GNQKNSGFLPEEREWIGk----------VIHKLg---------------------WTDMWRTLYPDVPg-YTWWSNRGQ 210 Neisseria meningiti...
15677903 164 -GNQKNSGFLPEEREWIGk----------VIHKLg---------------------WTDMWRTLYPDVPg-YTWWSNRGQ 210 Neisseria meningiti...
15600525 163 -ECQQMPGFLAPERAWLDe----------VFGNLG---------------------YADALREVSREGDQ-FSWWPDSEQ 209 Pseudomonas aerugin...
17544859 165 -GNQKNSGCLPEERAWLTr----------LFDEVg---------------------YVDVFRTLDPRPEq-YTWWSNRGQ 211 Ralstonia solanacearum
19112314 207 IIRESLIPSIMESRQWIR-----------DLLLPSrl-----------------glLLDIGRIQHPTRKGmFTCWNTRLN 258 fission yeast
15836769 164 -SNQKNSGCLPLERDWLNglc------adSLHEVNaaq---------------grgWVDTYRVLYPQGEd-YTWWSNRGA 220 Xylella fastidiosa ...
1AKO     219 GFDDN-RGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR 268 Escherichia coli
19551901 256 AFDTG-AGWRIDYQAATAAMLERAERSWVDKAAAYDLRWSDHSPLNVIYS- 304 Corynebacterium glutamicum ATCC 13032
15805383 238 AYANn-VGWRIDYLLSAGVRVSGVRS---DRSVRL----SDHAPLTGWVEL 280 Deinococcus radiodurans
19074386 270 LRPRn-LGTRIDYILIPARFLNRLKDCDIQPEIHG----SDHCPVYAEIDF 315 Encephalitozoon cuniculi
15793359 211 -AYAKdVGWRIDYQMVTPELAAKAVSAHVYKDEKF----SDHAPLVVEYDY 256 Neisseria meningitidis Z2491
15677903 211 -AYAKdVGWRIDYQMVTPELAAKAVSAHVYKDEKF----SDHAPLVVEYDY 256 Neisseria meningitidis MC58
15600525 210 -AEMLnLGWRFDYQVLTPGLRRFVRNAKLPRQPRF----SQHAPLIVDYDW 255 Pseudomonas aeruginosa PA01
17544859 212 -AYAKnVGWRIDYQIATPGIAATARSTSIFRDIKF----SDHAPLTVDYDA 257 Ralstonia solanacearum
19112314 259 TRPTn-YGTRIDYTLATPDLLPWVQDADIMAEVMG----SDHCPVYLDLKE 304 fission yeast
15836769 221 -ARVNnVGWRIDYQFVSPGLRERVSRCAIYREQRF----SDHAPYTVEYVL 266 Xylella fastidiosa 9a5c
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