Conserved Protein Domain Family
CbtA

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pfam09490: CbtA (this model, PSSM-Id:401442 is obsolete and has been replaced by 430642)
Probable cobalt transporter subunit (CbtA)
This entry represents a family of proteins which have been proposed to act as cobalt transporters acting in concert with vitamin B12 biosynthesis systems. Evidence for this assignment includes 1) prediction of five transmembrane segments, 2) positional gene linkage with known B12 biosynthesis genes, 3) upstream proximity of B12 transcriptional regulatory sites, 4) the absence of other known cobalt import systems and 5) the obligate co-localization with a small protein (CbtB) having a single additional transmembrane segment and a C-terminal histidine-rich motif likely to be a metal-binding site.
Statistics
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PSSM-Id: 401442
Aligned: 81 rows
Threshold Bit Score: 80.387
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_025350834          2 EKRIIGRGVLVGAIGGLLAFLFARILAEPIINRAIDYEGARDEAHTRLEEA-------------AGHGMh---------- 58  Nocardia...
WP_015928815          2 TIRLLSAALVAGFLAACVASGLQFALTSPLILEAEKYETHASLEPVQASSLivla------hagSEHGAghgag------ 69  Methylob...
jgi:Dshi_0161         2 SMKLLTSAVFAGLAAGLIAALLQFSFVTSSLLEGELYEAGEKVHFAVDGTP----------------------------- 52  Dinorose...
WP_011748805          2 FSRILTSGLIAGAVTGLIAALLQLWFVQPVLLHAELYESGQLAHFGAETVSah--------------------------- 54  Paracocc...
Q5LPH2                2 FSRILTSALFAGAAAGLIAALLQFLFVQPVLLHAELYETGELVHFGAEAVS----------------------------- 52  Ruegeria...
Q1GEG2               27 FARILTSALFAGAAAGLIAALLQLFFVQPVLLHAELYESGALVHFGGETVS----------------------------- 77  Ruegeria...
goetting:NGR_c21920   2 IVKTLLAAIVAGLIAGVFMSAAQELRVTPLILHAEEFEGEAPAAGEQPAGEqpaa------adhQQHSSlngvptlgeil 75  Sinorhiz...
WP_012091855          2 LIRYLLATLAAGLLAGLLVTPAMYLKTVPLILQAETYEDAGGGHSHGEAEAt-----------pHDHGAaa--------- 61  Ochrobac...
jgi:Mpe_B0481         3 FRRLVWCALAAALLVGSLQFAMQRWQALPIILAAERFEDQKAAAPAPAHEHthepvhegaaaggHEHAAaehh------- 75  Methylib...
CAP41747              3 FRRLIWAALAVALLVGSVQSGLQQLQTAPIILAAERFESQKVAAPEPVSTPtaaaarvhadgaaHDHGDaa--------- 73  Bordetel...
WP_025350834         59 ------------gVEDAE--------LFTRSVQENIGIGFGMIVFGAAMGALFAVVYCLF---VGRVGKLSPRNLALCVA 115 Nocardia...
WP_015928815         70 ---------aeteEWQPA-----------PGLPRLAFTALATLVSGVGYALLLGAVLLAT---GRPV----TRGEALRFA 122 Methylob...
jgi:Dshi_0161        53 -----------------QsprggaevDLAAEPVRYGLTVAFNIVTYTGFGLLLVALMALA---ETKKLTKITPRQGLIWG 112 Dinorose...
WP_011748805         55 ------------qDPGPF------------EWTRNMLSVLFTMMVYAGYGLMLVALMAVS---ESQG-NAVTARQGLLWG 106 Paracocc...
Q5LPH2               53 --------------AQPDl------pGMFADPMRDALTVVFAMLTYTGYAVVMVALMSVA---EGMG-HAITARAGLLWG 108 Ruegeria...
Q1GEG2               78 --------------AHPEl------pGIFDEPMRNLLSILFTMLIYTGYALILVALMSVA---ERQG-HEIRTGQGLLWG 133 Ruegeria...
goetting:NGR_c21920  76 aalspvtpayaheGEEHEe------gGIMFGMSRFSGTLAANLVTGAGFSLLLAGISLVI---GYPI----TLANGALWG 142 Sinorhiz...
WP_012091855         62 ------------eSAEEE--------GAELPFGRLGNTILANLVAGAGFALLLGGVALLL---GRRI----TVQNGIYWG 114 Ochrobac...
jgi:Mpe_B0481        76 ---------hdeaAWSPA-----------DGAERGFWTWVANVLHSFSMAMLLFAVMGAWvwrRGGSGG--MARLALAVA 133 Methylib...
CAP41747             74 ------------eAWAPA-----------DGVERYSWTWVANVLHAFSMALLVLAVMAVCqwrGSALR---AVPLAAWVA 127 Bordetel...
WP_025350834        116 GGMFAVLYAVPFFKYPANPPSIGNPDtIKERTGLYLLMVLISAVAAVGAVWLGRRLqarlgnwtativaglafVVVVTAI 195 Nocardia...
WP_015928815        123 IGGFLAASLAPAIGLPPELPGMGGEA-LALRQTWWIATALATAAGLYLVAIRGGAL-----------------AVATGLA 184 Methylob...
jgi:Dshi_0161       113 LAGFVAIQLAPAMGQPPVLPGSVGAE-IGPRQAWWLATLLSAGLAMWLLAFGRGLW------------------PWLAIP 173 Dinorose...
WP_011748805        107 LAGYLTMQLAPAFGLAPEVPGVAAAD-VQVRAIWWLGTALATGLALWLIAFGKGWA-----------------AWGVAVV 168 Paracocc...
Q5LPH2              109 LAGFITFHFAPGLSLAPEVPGVSYTD-ITARQIWWTATVAAAGIAMWLIAFGGNLM-----------------AYGAAAL 170 Ruegeria...
Q1GEG2              134 LAGFVALHFAPGFSLAPEVPGVAAAD-VGARQIWWAATVASAGVAMWLIAFGGNLV-----------------AYVVAAL 195 Ruegeria...
goetting:NGR_c21920 143 AFGWLAVHLLPAIGLPPELPGFPAAE-LGDRQLWWGATILFSAAGLYLLALRGEIV-----------------AKLAGLV 204 Sinorhiz...
WP_012091855        115 VAGFFAAAFLPALGLSPELPAMPAAD-LAERQLWWLATVVLSGLGLYLIVLRQEIW-----------------AKTLGLV 176 Ochrobac...
jgi:Mpe_B0481       134 AAGWLSLHLWPSLGLPAEVPGMDAAD-LRARQAWWLLAAAGAAGACGMLAFSTARW-----------------RWIAAAV 195 Methylib...
CAP41747            128 AAGWLTFHFWPSLGLHAEIPGMDAGR-LGSRQGWWVLAAGGAALACASVALMRSPL-----------------RWAAAMA 189 Bordetel...
WP_025350834        196 AAILPSLghlsanramgeavSETPRPltdpsgqivfPGFPADDL------YYFRFYSFAAQVLLWTVIGVGFATLA 265 Nocardia nova
WP_015928815        185 LIVAPHV-------------WGAPHVae-------sSALPAAVA------AQFAARSIAVAFAFWAVLGLAFGWAW 234 Methylobacte...
jgi:Dshi_0161       174 LLLVPQI-------------IGAPVLdt------yfGVTPAELA------ASFAAMSLGYSAAGWAALGFFAAYFY 224 Dinoroseobac...
WP_011748805        169 LLLAPHV-------------IGAPQPds------yaGPVPPELS------AEFAGRALGAGAMAWVLLGLLAGWFW 219 Paracoccus d...
Q5LPH2              171 LLIAPHL-------------IGAPEPes------faGPVPTELG------ALFAARAFGVGMAAWVLLGGFAGHFW 221 Ruegeria pom...
Q1GEG2              196 LLMAPHV-------------IGAPEPet------faGPVPTEIG------ALFAARALGIGMAAWALLGVFCAYFW 246 Ruegeria sp....
goetting:NGR_c21920 205 LVAAPHL-------------YGAPQPld------isSNVPAVLG------AEFAVAALATTLAFWLVLGIVSGFIN 255 Sinorhizobiu...
WP_012091855        177 LIVAPHL-------------YGAPHPed------isSPIPSLLA------SQYAVASLATNLFMWAVIGLALGWFI 227 Ochrobactrum...
jgi:Mpe_B0481       196 LLALPFV-------------VRAPQvad-----plaGFSGEAHArlaqlgRDFVWATTWVSLSFWASLGVIGGALF 253 Methylibium ...
CAP41747            190 CLALPFV-------------VGAPHIvad----plaGFTGEALAalrelgSQFIWATTWLSLSFWVSMGVVAGLAF 248 Bordetella p...
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