Conserved Protein Domain Family
COG3292

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COG3292: COG3292 (this model, PSSM-Id:225829 is obsolete and has been replaced by 442521)
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Statistics
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PSSM-Id: 225829
Aligned: 5 rows
Threshold Bit Score: 767.509
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15642080    9 FRTLLYGCLLNILIPSLVLALDKSMSIFYPLPIQE--QGKVIVAQNLYLGSDGGIWVHDVHGKVMYFDgqnvlprrgsvl 86   Vibrio cholerae
15641365    9 CCGVQICSVFLLIISSSAYAVVEHISDYFVETWTStdGLPHNSINSIAQTRDGYLWFATWEGVVRYNG------------ 76   Vibrio cholerae
15837931    1 MRGALLTALLVLVSLLTATAAVPEMPRFRVLDATS--GLPSNVVRAMLQDAAGYLWLATSDGLARYDGtafkv------- 71   Xylella fastidios...
17229015      --------------------------------------------------------------------------------      Nostoc sp. PCC 7120
16330553      --------------------------------------------------------------------------------      Synechocystis sp....
15642080   87 pqlsshivyaNSAFWAFEQHELFRTYPGGERELMLSLTPGtqIIQMGASNgmiwMVDGENFYsyeiRSGRVESLSLHELY 166  Vibrio cholerae
15641365   77 -----------INFQVFDRNPQTGMVDSGTRTLLPMDNNG--LLVAGARG----SITHRQSY----GWQSFRSAPSLVNG 135  Vibrio cholerae
15837931   72 ------wrhdPNDSGSLPGDSVLALYIDVQDRIWVLSENA--GLAVLDAQ----RRRFIQVP----VGSVAKTDALHTLT 135  Xylella fastidios...
17229015    1 ----------MAGGAVSKGNVIVGLFRKRTSLLITSILLG--LIGLPSLG----VLDIGNLA----RAEKAATNAPSPTT 60   Nostoc sp. PCC 7120
16330553    1 ----------------------MKMKPWRFLLLLGIFVIL--SVELLGLM----RRNFQSKR----RPGWQIIRPPHEVS 48   Synechocystis sp....
15642080  167 QLnsaskvvINDAQFLvskWALATNVGVYLSDEQGFAHVKNSgkhfiqklyfshkrRELLVGSKRGALVIDIENkrppld 246  Vibrio cholerae
15641365  136 AL-------IDDAQNL---WLAIEGLGVVVRPYLGNNLYGPD--------------RWLLTDASVYRLVKNQHG------ 185  Vibrio cholerae
15837931  136 GH-------GDAIWLS---DLHASVIRIDSAGALTRYALADV--------------SPTLKDTPVVALTFDANG------ 185  Xylella fastidios...
17229015   61 PD-------IKPSELK---PAYPASAPPPRVDPLPDERDMQE--------------RVVEIDYRVSNLLGDFAG------ 110  Nostoc sp. PCC 7120
16330553   49 AL-------VLQNQIL---WSGGKDGVVG-IDIQKREIVKTI--------------TCDPPVNFVQALVLDRQN------ 97   Synechocystis sp....
15642080  247 rigsshvlsiaetekEYWIGTEDGLFVYSFITGKIVQLESNNQDgyallgKKIYAMVNDFQGGMWIGTDKGIFYYSLFGq 326  Vibrio cholerae
15641365  186 ---------------VIFAATDKGLYRFNDWQASAMELPIGRY-------ERINYISISLNQELVVATDQGVWINTEEG- 242  Vibrio cholerae
15837931  186 ---------------RLWVGTPDGLLYFEAGR---LHLAPPPLD------KASIHSIAAVGSRLWVGSTDGVYLQDAEGr 241  Xylella fastidios...
17229015  111 ---------------NLWVGSWRGLSRIDPKTGKILARVSLPN-------VAIGALAQDKVGRLWVGTYEGLKRVEPRT- 167  Nostoc sp. PCC 7120
16330553   98 ---------------WLWIAHNKGLSYYDGQRCQAYQSDDSRFR------EPINTLYLDRQGQLWIGTWQGAAVKEKAG- 155  Synechocystis sp....
15642080  327 qftrypaQALSNDGSKTPIGKIAALNSDGdylaitaqglynfnfsdelrkhliypgkvndfviaQEHLWIATEKGLVRYN 406  Vibrio cholerae
15641365  243 ---------FQSLFVPLEKEVVTLAEQDR-----------------------------------AGNWWIGTVN-RGIAR 277  Vibrio cholerae
15837931  242 -------WRAPNWGPMFASGNLLLSVADAg----------------------------------DGEFWLGSERGLWRTR 280  Xylella fastidios...
17229015  168 -------NEISAQNLFLPSKRVLSLLTDK-----------------------------------RGYLWVGTDNGLA-LV 204  Nostoc sp. PCC 7120
16330553  156 -------WRWLGMADGLPDLMINLIAQDS-----------------------------------QGGMWFGSS------V 187  Synechocystis sp....
15642080  407 LSRRSIDTPNLPLPLLQTAIQHLSLDSDGNLWGTSDYQIWSYSLSEknyrdygseWMVKAFspsritllAAVKDGIVIGT 486  Vibrio cholerae
15641365  278 LKNQQLQFLEPSRGLPYSRVLSWYQDIEGSVWVGTNAGIMRLRDAP---------FIN-----------INSDKGLVGDY 337  Vibrio cholerae
15837931  281 QERPPVQIPLSDMHHGVSTVSSLWRDTSGGLWVPVYGRGLGYLRQD---------WKRMAV--------VRPSDGGESAY 343  Xylella fastidios...
17229015  205 SPDQGLIMTTVKNLPGVSG-NTLTLDADGQLWTGTLDGVVRINTAS---------ALIMKR--------INDLPGTTVQA 266  Nostoc sp. PCC 7120
16330553  188 APRGGLNYCLKKTCQKFSTSNGLPHNNITSLWIKDSN-KVWVGTG------------------------FFDR-GGAAQL 241  Synechocystis sp....
15642080  487 EHGAYSLLEKQIRFDFSSHrygeILQVAEDSSGHIWLVgsygVFQWRKdqpeavtvelieENIQPLCIAEsKQGMWLIST 566  Vibrio cholerae
15641365  338 VRTLLPLDDRRVMVGTSRG----LSIIEEGLAHSALMP----QVGARP------------SILSLAKADQqGEKVWVGTV 397  Vibrio cholerae
15837931  344 CNVAPAAYSGGLWQLNRIG----ELMHLNTSTGELVHTgw-qRHELRG------------MNITTTLEDS-RGRLWLANM 405  Xylella fastidios...
17229015  267 LAISPEGLIWAGMPNN--------LLVINPKTGVVLRS----VTRLRG------------RNVTAVRFAK-DGSVWVGTH 321  Nostoc sp. PCC 7120
16330553  242 EANNS---GWVVRKT---------LTAANGLAGAKVRS----IYQDR------------------------QGVLWLGSE 281  Synechocystis sp....
15642080  567 K-GISYYRNQEltkhFGAPYGLISNEFLSASCAVGEEQDNSsLIIGSQFGVVKTNTEELAVSNLPNIQVTFSQVSVnhtT 645  Vibrio cholerae
15641365  398 QkGLLLWQNGQ----LRPVLDENNGLPSSEVRAIVTDPQDN-LWIGTSNGIVKRTPQG--VLTTYNKDNSPLPDDY---I 467  Vibrio cholerae
15837931  406 QnGLSRLDLKNgqwrEWAAHEDDAVPLYGPISWIVEMPDSS-LWLEALGVLQQRDLESGRVLNQIVPGSHGLDGSR---V 481  Xylella fastidios...
17229015  322 N-GLLRLNPNT-----GAVLDEVAGLPSSRVLSLMPDVANK-LWIGTSEGLAWLMPKMDKAKPHLAFSRLVK-------- 386  Nostoc sp. PCC 7120
16330553  282 NdGLARLAGEN-----WLTLTEADGLANQEVKVMLEDQAGN-FWIGTKDGVNYIP-----AEQLLKLGDK---------- 340  Synechocystis sp....
15642080  646 KLLGYRMSEPLKIAYGDSIsfqfgALPSSRSQSLEYKLNDEQQWQRFDwALLNFDQLLPGKYRLKVRSANPtqrYRTEAL 725  Vibrio cholerae
15641365  468 MALAVDSEGKLWVGSAVGV-----AYFDAQGKIRPVDLTKQEQAQYVFgFYMESDYVWMATDRGIVRYRLS---DASVSL 539  Vibrio cholerae
15837931  482 EQIGLGPDGRLWLAAGSGV-----YAWESQRRMFVPISDLTGTRAYSF-VPVGGNEVWVHRLRGLEQWRHSshgWKRVAL 555  Xylella fastidios...
17229015      --------------------------------------------------------------------------------      Nostoc sp. PCC 7120
16330553      --------------------------------------------------------------------------------      Synechocystis sp....
15642080  726 FDFEVLQPWYMTSIALVGYVLSVLGLLALALWWRTrMILAANRKLKAQVELKTSQLRHQskivlsNNHQLRKQLQLHHTI 805  Vibrio cholerae
15641365  540 VGRAAGLPIDKFFQMLRDSEGHVWLSSNRGVWKLN-YDQMLAVADGMSTQLEFEHFDEG------DGMATSQANGGTNPA 612  Vibrio cholerae
15837931  556 VGPQHGLPAMESLGMQHDAQGRIWLSTRRGLWRIDnTDELQVRNFGLRDGLGTQEFAEAclwmapDGVLVGGTTDGYLML 635  Xylella fastidios...
17229015      --------------------------------------------------------------------------------      Nostoc sp. PCC 7120
16330553      --------------------------------------------------------------------------------      Synechocystis sp....
15642080  806 LGNVLDN--IDASLRHLSSYAKVRAWSEFEAPFNKVKQELAQLHFMHRGDEDESkyhdLHLLIESAL 870  Vibrio cholerae
15641365  613 SASLPNGelLFATAKGVASIKVQRLQQLSELRLPVVLESVSFDSEIINPDQQYI----AAAGTNRVS 675  Vibrio cholerae
15837931  636 FDTAMPDpaPFVPQLRMETVSVIRAGRRIDLPVDQPFELLPNDRQLIVGARLLS----FGDPLSNRY 698  Xylella fastidiosa 9a5c
17229015      -------------------------------------------------------------------      Nostoc sp. PCC 7120
16330553      -------------------------------------------------------------------      Synechocystis sp. PCC 6803
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