Conserved Protein Domain Family
ClpA

?
COG0542: ClpA (this model, PSSM-Id:223616 is obsolete and has been replaced by 440308)
ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
Statistics
?
PSSM-Id: 223616
Aligned: 128 rows
Threshold Bit Score: 422.844
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15606774  109 SKIRKAKERILRELEYARRYgdwwtaetlelelRQLEATEQSIRRQLEQVEKSLstVFAPEDVKAFLENKLSIDGLIRKA 188  Aquifex aeolicus
15594714    1 MYDRRALNCLFFNTFLFFMEs------------RHLVFTEEHIFYGLIKSDKVK--ELLNLCAIDFYKLNKQLEEFFSKL 66   Lyme disease spir...
15595179    1 -------MVEIDSKEIARKN-------------KNKEVSIWHLLMSIITTPKKs--EIKFIDSKTLKNIKQEVISEIDKL 58   Lyme disease spir...
19552964    1 ----------------------------------------------------------MNSRGLPHTTNHYKKEPPTVPF 22   Corynebacterium g...
19552991      --------------------------------------------------------------------------------      Corynebacterium g...
19074942    5 KYTERAQNALKMCVDEALAN-------------NNNTIEPEHLLKAILSDQTSv--LHNVLSPTERNNVKNALIKRIGGF 69   Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312      --------------------------------------------------------------------------------      Methanothermobact...
15597921      --------------------------------------------------------------------------------      Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  189 LEKSPLieqvkelgISPdriidkvaekvfgkkptfdySQYLTQVLEKAQDKAVSE--GEAQVQPSHISAALIEAK-DTIG 265  Aquifex aeolicus
15594714   67 PLRGNYipdyvssmDYLyddi------------isvlFFYKKPYKIQEKDLLWVLvkKRKNSILDALLSSGFNLTiFDKL 134  Lyme disease spir...
15595179   59 EKILIEk------nEII--------------------IPKINKEIFALIKEAKKEfkSKPLIGAKEIFYQILKNK-KLLK 111  Lyme disease spir...
19552964   23 HDFTD--------------------------------PDSDPRQNAPANPTAQPP-----SAPTSHSSQQGLPPG----- 60   Corynebacterium g...
19552991      --------------------------------------------------------------------------------      Corynebacterium g...
19074942   70 AKQYNCt------------------------------EPRVGETLAKVLMAAESKg-EGEYVSVNALVLSLLEVE----- 113  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312      --------------------------------------------------------------------------------      Methanothermobact...
15597921      --------------------------------------------------------------------------------      Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  266 GKLINQVLGGEK------EMKKDVTQ-------------ELKEEEKS---------PLERFGVNLNELARQGKLDPVIGR 317  Aquifex aeolicus
15594714  135 IEAHDYLAVNTKsasgdsELIAEYIHnnapkrkggfhifDDKRDELDqnnifleskDSIGNFLTNVIDTLDLKYNPLIGR 214  Lyme disease spir...
15595179  112 KHKLSKSSFNFKd----qNILEYMEKnkir------lieTYKEFDEEirle-nehfEIGKYVKNLTALAKAKKLDPLVGR 180  Lyme disease spir...
19552964   61 -AIMIPFPGQPQ---------QQ-----------------S---------------APNDETRFIDLNERHKDDEPALFR 98   Corynebacterium g...
19552991    1 ----MTQVVAGTlv--geSINREID-------------------E------------DKYPYLSSYAAPVAVPVREIIGR 43   Corynebacterium g...
19074942  114 --SIRELIANSEdi--rkKVEEQTKnk----------rfDSRNADDGt-------dVMSRFAVDMVEQARQNVFDPVIGR 172  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312    1 -------------------------------------------------------mAVWQDNLKRLLNQKEVLIIHGNIR 25   Methanothermobact...
15597921    1 ---------------------------------------------------------MALGAICCGHDTRCERLSMPGTA 23   Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  318 EREINQVIEILLRRTKNNPVLVG-DPGVGKTAIVEGLAQRIVNKEVPPE--LQDKEIWSIDMASLLAGSKYRGEFEERLK 394  Aquifex aeolicus
15594714  215 SQELSRLIQVILRKHKSNPILFG-EPGVGKTVLIQGLAYKIKIENVPKD--LIGYEIYSLDIGRLVSGTKYRGDLESRVN 291  Lyme disease spir...
15595179  181 EAEIKTLTNILLRRNKNSAMLIG-EPGVGKTAIVEGLASSIVQKKISSK--LQDKTILMLKVSNLVSGTKYRGEFEDRLN 257  Lyme disease spir...
19552964   99 DDVIDQTLAILISKNKPNALLVG-PAGTGKSRIAEDIARRLANDDVSIPdqLVGHRILDVSIAELVAGAGVVGQLEERIL 177  Corynebacterium g...
19552991   44 EEEVNKIMAALMRPEISNVMLVG-PAGSGKTTLVQQALVKDPERNYIEV---DVAKMVADLSTPAQMAARIKGVFEDAIA 119  Corynebacterium g...
19074942  173 DEEIRRVLEILSKKTKSNAILVG-KPGVGKTAIVNGIAQLIANGEAPT---LRGARIYNVDVGSMVAGTSHRGDFEERLK 248  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312   26 DTAYLTEEGNLVRGLTDLINRTGrELGYDKTVSWGSFFDHEGRGHSPMWs-LERITPLNGDQPEIRETESQDRVSDVLHR 104  Methanothermobact...
15597921   24 LFEKPRWLRDLLRFLPLKSQFVL---SGN---IRDLQACEVVPGTVTAQ---SFNQTLCDALLDAGYAQVLAWDPLAGFR 94   Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  395 ALLDEVK-EKgNVILFIDEIHTVVGAG---AaEgAVDAANIMKPALARGEIRVIGATTVDEYRKYIEKDPALERRFQPVF 470  Aquifex aeolicus
15594714  292 RVLDFLSsRK-KVMLFIDEIHMIVGAGat--sFgSMDISNLLKPILTLGKIKFIGATTEYEYRKFFLKDKALMRRFQSIE 368  Lyme disease spir...
15595179  258 NIIKYIEkNK-NTIIFIDEIHTLIGAGnseG---ALDASNILKPSLSRAEIQIIGATTYNEYRKYISKDKAFARRFQTIT 333  Lyme disease spir...
19552964  178 DLIKYATdPSnKVIIFIDEIHQIAGDQsshS-GsQAKVAQILKPYLARGDLRVIGATTTQEAR-DFDHDPALKRRFSRVN 255  Corynebacterium g...
19552991  120 YRKHEGH----ELVLFVDEFHQIVQLSna-----aVEAIKPILAMSGVLGVRVIAATTLEEFHEHIRPNQALTERLQEIR 190  Corynebacterium g...
19074942  249 TLVKEAEtTP-GVILFIDEIHIVLGAGktdG---AMDAANMLKPGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVV 324  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312  105 WLEDEITsIDeKKIFIINYIDKITGYAp---------DGMYSEPTAELVTLIQKIIENISENNRLIMIALRDTMIPVEYY 175  Methanothermobact...
15597921   95 VLGRPGSeAGaTPQVLLDLGLTPVDGAapaG----IDLLGATLQRLVNRSGEPIALIVDFASR-LAVRNDALSAAEHQLF 169  Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  471 VDEPTEEQTIEILKGLRPRLEQFHK--VKISDEAIEAAVKLTKRYVT-FRRLPDKAIDALDQAAARKKLKVIgTPPEIQE 547  Aquifex aeolicus
15594714  369 LKEPNFEDAYNILQEIKKDYERYHN--VEYTDEAIQACILMSQKYIK-DRFLPDKAFDILDELGSKFKLEN--------- 436  Lyme disease spir...
15595179  334 VKEPDEKDTLKIIENIAKNFEDYHG--VIYEKSALLNIVKLSSKYLI-NKRFPDKAIDIIDIAGAIKKEE---------- 400  Lyme disease spir...
19552964  256 VDEFDRDQTLTILHAARDGYLKHFNnaVTVSDDVLGYVYTYSQQFNPgNTAQPDAALTLFDKALASLTME---------- 325  Corynebacterium g...
19552991  191 LTPTDQKTTVAILRGMADRYGVSDQ---FYDDHVFEQIYSTTERFMP-SSVQPRKSIRVLDAMVGWHRLS---------- 256  Corynebacterium g...
19074942  325 VNEPSIEDSITMLRGLKGRLEAYHG--VKIADSAIVYAVNSSKKYIS-NRRLPDVAIDLLDTACASVMIALEsEPQEILN 401  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312  176 TNSPRVAVMEIPLPDRAERHLYYST---TLASASIPSDQIDLLSNITeGLYMKDLENILSDVLEEIDENQ---------- 242  Methanothermobact...
15597921  170 TQALVLSHQARSRPAGEQRKPFFNS-----VLWVVEKEGDLPDWLLVdNPRLRHIPVSKPDQPARRALAPALlRGLGGAG 244  Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  548 IERKIKALEEQIIEANLKGDy-------------------------------EKEAQLKIEKAKLEKekqellgkvggve 596  Aquifex aeolicus
15594714  437 ------------------------------------------------------IKRIITk------------------- 443  Lyme disease spir...
15595179  401 ----------------------------------------------------LTKDNIIT-------------------- 408  Lyme disease spir...
19552964  326 -----------------------------------------------------KQRLINNHVIAPSl------------- 339  Corynebacterium g...
19552991  257 -------------------------------------------------------GKPMDMD------------------ 263  Corynebacterium g...
19074942  402 QKSKAWGLDIAKTSLEFDLSqkkdeqtlkklkevveelekvkaslqpmeeayLRDKKHIIEAKKLKKkledtklrlaqae 481  Encephalitozoon c...
18202342    1 -----------------------------------------------------------------------mpeptptay 9    Mycobacterium tub...
15678312  243 ------E---------------------------------------------VSSSMLRKIVNRYR-------------- 257  Methanothermobact...
15597921  245 VAEEALQQAAATFVENTEG----------------------------------LLLLDLNAIVQLAR------------- 277  Pseudomonas aerug...
12230885      --------------------------------------------------------------------------------      Pseudomonas aerug...
15606774  597 akiaelkkkieeldekikeaaekgdyekeaelkiekAKLEKELKKLEQeKske---lvVTWDDVAEVVSEWTGIPVS-RL 672  Aquifex aeolicus
15594714  444 -------------------------------------------------------------DDVCDLIKSIVGSNIF-NF 461  Lyme disease spir...
15595179  409 -------------------------------------------------S-----------DDIQKAINEILSIKTA-NN 427  Lyme disease spir...
19552964  340 ------------------------------------KFP------------------------VSERHIHNTARKLA-FG 358  Corynebacterium g...
19552991  264 --------------------------------------------------------------LLGDVLHDAIGVDIA--- 278  Corynebacterium g...
19074942  482 -----------------------rdrntyvaydlktNVIPVIESELKRlEles--vvvILPSHVAEIISRWTGIDVK-RL 535  Encephalitozoon c...
18202342   10 pvrldelinaikrvhsdvldqlsdavlaaehlgeiadhlighfvdqarrsgaswsdigksmgvtkqaaqkrfvpraeatt 89   Mycobacterium tub...
15678312  258 ---------------------------------------------------------------IGTEEDPWSRIPLT--G 272  Methanothermobact...
15597921  278 -----------------------------------------VEG--------------LAMERIADAVRRYKVGVTEdPW 302  Pseudomonas aerug...
12230885    1 --------------------------------------MPFLSDMLDQsRrqqdeeqaLARENLAEASLLQAHLSHRsAL 42   Pseudomonas aerug...
15606774  673 KEEEMQKLLKLEDELHKRVVDQEHAVKAVAEAIRRARAGLKDPKRPIA-----SFLFLGPTGVGKTELSKALAELLFGDE 747  Aquifex aeolicus
15594714  462 EEYDGELLINLENRIKKELIIHDNLVLDLILNIKLLKFNLLANRSTIG-----IFAFIGASGSGKCKLMDILSEEFK--- 533  Lyme disease spir...
15595179  428 TKEEILELKEIESEINKKVIGQKHAVSELIKEIIKVKLGLNDDSKPLT-----SILLIGSSGCGKTALTDEISKKIIKDQ 502  Lyme disease spir...
19552964  359 SQVPASINTDDARDKLETLFGQDHIIEPVLTAIKREQLGIFPRTKPLS-----WVF-AGSSGVGKTEMARILSRAING-- 430  Corynebacterium g...
19552991  279 ---FKVDGTSIKDKLDEKVMAQSLATTVVARRLQLVVADLHDKSRPLS-----NFLFTGPTGVGKTELVKQLARVLFGDD 350  Corynebacterium g...
19074942  536 TIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLDDDDRPVG-----SFLLLGPTGVGKTELAKAVAMELFDNE 610  Encephalitozoon c...
18202342   90 ldsnqgFRRFTPRARNAVVAAQNAAHGAASSEITPDHLLLGVLTDPAAla--tALLQQQEIDIATLRTAVTLPPAVTEPP 167  Mycobacterium tub...
15678312  273 --PPKGLLDSAENWFLERVVGQDHAVREIVNAIKKARSGVVGLSSGGQskpkaTFFFAGPTGVGKTFLAKKLAEYLFDTE 350  Methanothermobact...
15597921  303 LKIDRQRIRQADEIVRRRVKGQQHAVTHMLDIVKRAMTGVGASRKGNRpr--gVAFLAGPTGVGKTELAKTVTSLLFGDE 380  Pseudomonas aerug...
12230885   43 RSRFRFDPAAVMDCLRAEVLGQDPALQAVEDMLKVVRADIADPRRPLF-----SALFLGPTGVGKTEIVRALARALHGDA 117  Pseudomonas aerug...
15606774  748 -DALIRLDMSEFKEEHSVAKLIGAPPGYVGYEE-GGKLTEAVRRK--P--YSVILLDEIEKAHPRVLDLFLQVLDDGRLT 821  Aquifex aeolicus
15594714  534 -IPKFSLNMGEYNDFNSLDRLIGPVLSNEGYYEsTRFFKFLNKSS-----NSIIFLSDFDKCNKRVLDFFLEGFKTGKLF 607  Lyme disease spir...
15595179  503 -NSVLKLDMSDYKEENSISKLIGTNPGYVGYSD-GGILTNKLRHS--F--ETLILFENIENAHSSVLNLISRMLENGELI 576  Lyme disease spir...
19552964  431 -GDPIIINGPEYISPESITGLIGSSDGYIGSNSkRAKPLDPLISN--P--RQVIVLDEFEKSHPHFQQLFMAALDTGTMA 505  Corynebacterium g...
19552991  351 tGRLIRFDMSEFALESSLDLFRSELTRRVADQG-----------N-----A-IVLLDEVEKADRAIARLLLQVLDDGRLS 413  Corynebacterium g...
19074942  611 -KDMLVIDMSEYGNEMGITKLIGANAGYVGYNQ-GGTLTEPIKGR--P--YNVILLDEVDLAHQTVLNTLYQLLDEGRVT 684  Encephalitozoon c...
18202342  168 -QPIPFSGPARKVLELTFREALRLGHNYIGTEHlLLALLELEDGD--G--PLHRSGVDKSRAEADLITTLASLTGANAAG 242  Mycobacterium tub...
15678312  351 -EAFLRFDMSEFKEEHTVSKLIGSPPGYVGYEQ-GGQLTNAIKNR--P--FSVILFDEIEKAHPKIMDIFLQILDDGRLT 424  Methanothermobact...
15597921  381 -SAYIRFDMSEFSAEHADQRLIGAPPGYVGYDV-GGELTNAIREK--P--FSVVLFDEIEKAHPRILDKFLQILDDGVLT 454  Pseudomonas aerug...
12230885  118 -EGFCRVDMNTLSQEHYAAALTGAPPGYVGAKE-GTTLLEQDKLDgsPgrPGIVLFDELEKASPEVVHALLNVLDNGLLR 195  Pseudomonas aerug...
15606774  822 DSHG-RTVDFRNTVIIMTSNIGSQYLLNI---PVDad---------eeTLNREFEKAKEKVLEELKLYMRPEFINRIDE- 887  Aquifex aeolicus
15594714  608 DGLG-KKVSLSESLIVISINAESKELNSIg--------------------FRNKMAGENDFNFILKKRLPNEFLELIDH- 665  Lyme disease spir...
15595179  577 DSKE-DKILFKNTIIIMTTNIGSRMLLGEkniGFNkn----------qQKSLETKSFKEEINQDLEKRFKLSFLDRIQK- 644  Lyme disease spir...
19552964  506 MANG-TTLNFSQAIIIATTNAARDKIGRDsfgFDSdnsg-----vlgsAQAATDPRAQERLKSLMSKDFPVELLNRFQN- 578  Corynebacterium g...
19552991  414 DDYN-REVSFLNTYIVMTTNAGSEIFETIsnyATDdt----------gDGRAIKDFVKNIHTSIKNKGFPPELLGRVDE- 481  Corynebacterium g...
19074942  685 DGKG-AVVDFRNCVVIMTSNLGQEIIMRS-------------------R-GELNDDERKKIEEIVLNRFGAPFVNRIDE- 742  Encephalitozoon c...
18202342  243 ATDA-GATDAG--------------------------------------------------------------------- 252  Mycobacterium tub...
15678312  425 DSRG-QTVFFTESVIIFTSNIGTRTVDSRgntTSEqrkldeiindsdlSDSERERRVREHFTRSVREFFMHEISRRELLn 503  Methanothermobact...
15597921  455 SGRG-DRVYFSEALIVFTSNLGIYRQGENgerVANvlp-------gepFEAVQGKVHGEIERYFKLVLNRPEILNRIGEn 526  Pseudomonas aerug...
12230885  196 VASGeRTYHFRNTLVFMTSNLCAHEIQRYderRQRlpwr-----llpvGGERRRRDIDGMVRARLLKTFSPEFVNRLDS- 269  Pseudomonas aerug...
15606774  888 -----IIVFKPLTM-RELSKIIDLLIANVNKRLA----ERNIKIELTEEAKKELVRRGYD----PAFGARPLKRTIQKYV 953  Aquifex aeolicus
15594714  666 -----VFVFKSIDE-LDFEKIIFNELNYFARILR----DRKFDVFFEKSVVDYIREKIYG----KGYSLKSVRKFIFKEL 731  Lyme disease spir...
15595179  645 -----KIILNILTK-ENVEEICKNYLNTLKTKFH----SKGIEIEIKKDVDKFITTKYYK----KNSGARSVIAAIKGKI 710  Lyme disease spir...
19552964  579 -----IFAFNRIDA-GTYREILDNLYQRRRDAVLl--sHPHYAAQIPADIDSDTLDQLVEttfiSDFGARPAARTIEDHI 650  Corynebacterium g...
19552991  482 -----IVPFQPLSE-TTQDRIISKKLQDVATEVYe---RHGVKLHCSQKVMEFLLVDQVEes-aESGGARGAVRSLQREV 551  Corynebacterium g...
19074942  743 -----VLYFNNLDR-ENMHRILEYQMGYLEKKLR----GRGITFKVSDAVKEDMVTKVLS----SIYGARQLRRFIRSSF 808  Encephalitozoon c...
18202342      --------------------------------------------------------------------------------      Mycobacterium tub...
15678312  504 rigshIIAFNYLKKsDYQVNIIENKLKDISENFRdkfaGRGHRLHLSGELTGYFLEKYGDs--iSEFGGRGLVNALEDEI 581  Methanothermobact...
15597921  527 -----IIVFDFIRA-DVAEQIFTQMVNGTFADLR----EQRLVIELAEAPRQALHDLCLGd---LSNGGRGIRNQLEARL 593  Pseudomonas aerug...
12230885  270 -----VVTFNWIER-DVVARLVELEVQRLNRRLE----KHRCRLEATPEVLAKIARAGFD----RQFGARALRRSVRHHL 335  Pseudomonas aerug...
15606774  954 ETPLADKIIRGEIKd---GMTVVVDYKDG---EFVFIPKEE 988  Aquifex aeolicus
15594714  732 GKLLIDEILFKKIEn---SGKIKIYLD-E---TIKYEFL-- 763  Lyme disease spirochete
15595179  711 EENIITKIAENQNIn---KITIYLEKE-----KIIIE---- 739  Lyme disease spirochete
19552964  651 ASLLM------------------------------------ 655  Corynebacterium glutamicum ATCC 13032
19552991  552 VTEVATFINTYPEVr---DIYVDVDGQMr--nKTNRVSTAR 587  Corynebacterium glutamicum ATCC 13032
19074942  809 KRALTKVLLMRVNEd---PIEVSCTHPSegagGIRISDYVY 846  Encephalitozoon cuniculi
18202342      -----------------------------------------      Mycobacterium tuberculosis
15678312  582 GNIVADQLLLAEERgm-sDINFEVYVDG----DVIRCRRS- 616  Methanothermobacter thermautotrophicus str. Delta H
15597921  594 LNPLSRALFDQDAQp---GERFLISALD----ADGLTLERR 627  Pseudomonas aeruginosa PA01
12230885  336 EVPLAEHLLDHHQPgdgnCTTYLASLEHE---RVRFVRR-- 371  Pseudomonas aeruginosa
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap