Conserved Protein Domain Family
DUF4540
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pfam15073: DUF4540 (this model, PSSM-Id:405719 is obsolete and has been replaced by 434439)
Domain of unknown function (DUF4540)
This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 302 amino acids in length. In humans, it is found in the chromosomal position, C7orf72.
Links
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Statistics
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PSSM-Id: 405719
Aligned: 12 rows
Threshold Bit Score: 152.588
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EKC29118     294 DGPINFSSPCPRTQHIPNYSGCIGADNLDEKDNQKEPFYPYTIKRVNIPRYSETGHRPNIPGYQGCTLWQGVYaPAHSTK 373 Pacific oyster
XP_013976225  55 VKPVTFVSPSSRSKYIPLYTGYVQSTSADDVDNPFGDITSIAKPRSSKILYTNTSRSADIPGYTSKRRSVASR-PAHPEI 133 dog
XP_004739454 309 VKPITFVSPSSRSKYIPLYTGYVQSTNADDVDDPFGDITSVTKPRSSKTLYTNTSRSANIPGYTGKVHFTARQ-PANSDI 387 domestic ferret
2_pfamImport   1 ------VSSSSRSKYIPLYTFHIWVLVTMTISQIIILISSLP------PLLTLHFSAANIPGYTGKVHFTATH-PANSNI 67 
XP_003268973 306 VKPINFVSSSSRSKYIPLYTGHVQSTNADDVDNPLGDMASLAKQRCSKPLYTNTSRAANIPGYTGKVHFTATH-PANSNI 384 northern white-...
XP_003463518 309 AKPISFVSPSSRSKYIPLYSGHLPAADSDALDDPCGDIMALPQPRRSKPLYTNTSRAANIPGYTGKVHFMATQ-PANSNI 387 domestic guinea...
XP_006514884 314 AKPINFVSPSTRSKYIPLYTGHVQSTDADNVDNPYGDIKSVASPRHSKLQYTNSSRSANIPGYTGKVHFTATH-PTNSNI 392 house mouse
XP_007500478 311 KRPINFVSPSSRTQYVPLYTGYVESSNPDDRDNPDGDLESLGKPRQSRLFHTNPRRSENIPGYTGKVHFLSTQ-PATWDI 389 gray short-tail...
XP_015212660 289 QKPISYISPCPRISQIPLYTGTAGAENMEDVDNPEEEFVPFTVQRTLLPQYTETAHRPNIPGYTGRVHFKASH-PANSSL 367 spotted gar
XP_009858706 232 nrPYSYTSHYRKSGHIPCYGGCVGAYNFEDKDHPHEEYRPLTSLRTPKPRYTDTAHRPNIPHYKGCVHWTATH-SANNTF 310 vase tunicate
XP_005473876 131 KKPISFCSTYPRSGQIPLYTGTVGSENMDNIDNMDEDFHPLTVKRSVVPPHTPTARRTTIPGYTG----MAAY--ADSAA 204 Nile tilapia
XP_027809160  55 VKPVSFvspssrsqyiplytDHVQTTNADDVDNPFGDTRSLAKPRCSRILYSTTSHAPNIPGYTGKVHFTATH-PANSNI 133 yellow-bellied ...

EKC29118     374 IVNAQSTTSTVHKSMPVSPNNSNHKRDSQMSKMVTTVPPCNPFNQINKL 422 Pacific oyster
XP_013976225 134 LPTTPSTDSEAHRILRKEMEVDLFGHQAPLSRMVTTVKPYNPFNKKQKE 182 dog
XP_004739454 388 PSTAPSPDSEVHRILRKEMKVDVFRHQAPLSQMVTNVKPYNPFNKKQQE 436 domestic ferret
2_pfamImport  68 PSTTPSPDSELHRVLRKEMAVDLFRHQAPLSRLVTTVRPYNPFNKKDKE 116
XP_003268973 385 PSTNLSSDSELRRVLQKEMAVDLFRHQAPLSRLVTTVRPYNPFNKKDKE 433 northern white-cheeked gibbon
XP_003463518 388 PSTSPSPNSELHRTLQKEMRVDLFRHQGPLSRMVTTVRPYNPFNRKEKE 436 domestic guinea pig
XP_006514884 393 PSREPSADSEMNRLLLQEMRVDRFRHQGPMSQMVTTVKPYNPFNKKEKE 441 house mouse
XP_007500478 390 PPTTPDVGSEVRRTIWECKDQPNYRHVGPLSKMVSLVEPYNTFNGVVKE 438 gray short-tailed opossum
XP_015212660 368 P--TPPTTALVHGYIMTSGNKSPHRRLGPLSKMVTNVSPCNPFQNIRRE 414 spotted gar
XP_009858706 311 PAPQPPSTAHSHRKLPTSPNTSIHSKKGPLSRMVTTVPPKNPFNQVEdq 359 vase tunicate
XP_005473876 205 PATSAGSSG-----AFEELGTSVFRHTAPLSRTVTAVPPCNPFVRpvlp 248 Nile tilapia
XP_027809160 134 SSTTPSPDSELQGVLRKEMKVDQFCHQAPLSRMVTTVKPYNPFNRIEKK 182 yellow-bellied marmot
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