Conserved Protein Domain Family
strep_PBP3

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NF038273: strep_PBP3 
streptococcal D-alanyl-D-alanine carboxypeptidase PBP3
PBP3 (penicillin-binding protein 3) is the lone D-alanyl-D-alanine carboxypeptidase in Streptococcus pneumoniae. The gene is known as pbp3 or dacA.
Statistics
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PSSM-Id: 468443
Aligned: 41 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014633785   2 KKLITL-MITFLLCLg--SVAPAFAAdkkKgYDAAAKHAIAVEANTGKILYEKDATTSTGIGSITKLLTAYMVYKAVDQG 78  Streptococcus s...
WP_003100860   2 KKLIIS-LLLCFICL---PLKTVSAE---A-LKIKADSTLVYDVTSGKILYESHAKEKVPVASLSKALTAYLVYKAVDNK 73  Streptococcus i...
WP_018367107   2 KKIITI-VSLFIFFF---SLDTIHAD---A-FDIPAENAIAFDLDSGKILYEKKAKEVVPVASLSKVLTIYLVYKEIQEG 73  Streptococcus d...
WP_007893667   2 KKLVFL-ILPLLFCF---LPKTILAD---D-YKLPAKSGIAFEVSTGKILYEKNAKKTLPIASLSKILTTYLVYKEVQSG 73  Streptococcus p...
WP_003108557   2 KKIIMI-LSLLVSTI---TITTTSAE---D-IELKTDSAIAFDIESGKVLYEKNAKKILPVASATKVLTTYMVYKEIEQG 73  Streptococcus p...
WP_015016939   7 KRLAIL-FFVVLACSg--LGKTVLAA---D-FQVGAEHAIVVEVDSGRVLYEKDAKTPDAIASLTKLVTAYLVLDKVNSG 79  Streptococcus d...
WP_003048660   2 KRWAIL-FFVALACSg--IGNTVLAA---D-FQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTKLVTAYLVLDKVKSG 74  Streptococcus c...
WP_008088737   7 NKLLCLgMVLVLSFG---FMPKVGAD---E-FQVGAKHVIAVEVGTGRVLYEKEAQKRAAIASLTKLLTAYLVLEKVASG 79  Streptococcus i...
WP_007893621   3 KQIYLM-LICILTLFp--LSHPVFAD---QaLNLRAKEAIAVEYSTGKILYQKNSDRKVPIASLTKIMTIYLTLKEINSG 76  Streptococcus p...
WP_012657887   2 KKTILS-TIIVGLFLwtpSTLVLAQE---K-LVINAKQAIAVECETGKILYQKEANQKAPIASLTKILTVYLTLKEIKNG 76  Streptococcus u...
WP_014633785  79 DLKWNSKVDISDYPFELTVSAGVSNIPLDARKYTVKQLLDATLISSANSASIALAEEIGGTESKFVDMMKAQLKDWGITD 158 Streptococcus s...
WP_003100860  74 KIKWNTPVKISNYPYELTANYDISNVPLDAREYTVEELLEAMLVTNANSAAIALAEKISGTEPLFVDLMKKQLKEWGINQ 153 Streptococcus i...
WP_018367107  74 RLSWESPVKISNYPFELTTNYNISNIPLDAREYTVRELVNAMLVTNANSPAIALAEKISGTEPLFVDLMKRQLKDWGISD 153 Streptococcus d...
WP_007893667  74 NLSWDTPVKISNYPYELTTNYSISNVPLDARQYTVEELLTAMLVTNANSPAIALAEKIAGTEPLFVDKMKKQLQEWKIHK 153 Streptococcus p...
WP_003108557  74 KLEWSSPVTISDYPFQLTTNYTISNVPLDARKYTVKQLMKAMLVTNANSAAIALAEKIGGTEPIFVDKMKKQLEVWGIND 153 Streptococcus p...
WP_015016939  80 QLQLSDQVNLSDYAFELTTDSSLSNVPFDQKTYSVQDLLEATLVASSNSAAIALAEKVAGSEPNFVAQMRAQLSRWGITS 159 Streptococcus d...
WP_003048660  75 QLHLSDQVNLSDYALELTTDSSLSNVAFDEKSYSVQDLLTATLVASSNSAAIALAEQVAGSEPNFVTQMRDQLSRWGIDS 154 Streptococcus c...
WP_008088737  80 DVQLTDSVTISDYAYGLTSDASLSNVPFEKRDYVLKDLLAACLVASSNSAAIALADHVSGSEAAFVNQMKEQLVKWHIED 159 Streptococcus i...
WP_007893621  77 RLKWDDSVEMSKYATDLANNPDISNPPLYKNSYSVKELVDSSMVVSSNSSAIALAEKISGSEAKFVDKMKDQLKTWGITD 156 Streptococcus p...
WP_012657887  77 KISWDTPVKMSDYAKELANNPDVSNPSLYKDTFTVKELIDSSMVVSSNSAAISLAETIAGSEPQFVDMMKKQLQTWGIQD 156 Streptococcus u...
WP_014633785 159 AKIVNASGLNNSYLGDNIYPGSKSDEENTMSAKDVAIIAQHVVKEYPEILDITKKTEADFDGvNKLKTFNYMLKGQPSYR 238 Streptococcus s...
WP_003100860 154 NTVVNATGLPNSILGSNRYPKSKEDAENLFSALDLAIVSRHLLQEYPQVLKLTNKATTTFSG-TSIYSYNYMLKGMPFER 232 Streptococcus i...
WP_018367107 154 AKLVNATGLSNKLLGQHTYPNSGEDAENMLSAFDLAIITGHLLKDFPEILKITSLTSTSFAN-QTIYSYNYMLEGMPHFR 232 Streptococcus d...
WP_007893667 154 ADLVNASGLSNEQLGNHIYPNSQKDAENKMSALDLAIVTRHLLLDYPQVLELTKKPAATFRG-DQIFSYNFLLEGMPNHR 232 Streptococcus p...
WP_003108557 154 AKLYNATGLPNSILGDNIYPKSKQSAENKLSAKDLAIITHHLLTEYPEVLKYTSLPKATFDG-QDIYSYNYMLEGYPYER 232 Streptococcus p...
WP_015016939 160 GKILNASGLPNEVLKDHRYPGSALEEENMLSAQDVAIVTMHLLEDFPEILEITKQTDVDFAG-NSIKSFNQLLPGMAKGR 238 Streptococcus d...
WP_003048660 155 AKIFNASGLPNEVLKDHRYPGSALEEENALSAQDVAVVVLHLLEDFPEVLDITKQAEVAFAG-TTLKSFNRLLPGMANGR 233 Streptococcus c...
WP_008088737 160 FKLVNASGLPNELLGSSVYPGSGPDDENELSAEAVALIAMHLVENFPEVLEITKQAQIDFDG-TTVKSFNQLLPGMPHAR 238 Streptococcus i...
WP_007893621 157 YQLVNASGLNNSMLNGHIYPGSSKTSENRLSAKSLAIVSRHLIKDFPEILTISSQNQIYWGN-DILTNSNHLLPGNTMAR 235 Streptococcus p...
WP_012657887 157 YQLVNASGLNNSMLNGHLYPKSKPNDENQLSAKNLAIVASHLISEFPEILAISSQSQLYWGN-DVLQNSNHLLPGLSMGR 235 Streptococcus u...
WP_014633785 239 KGVDGLKTGTTDLAGASFVAHSNESGMSIITVILNADNTDTDDYARFTATNDLLNYVVYHWESKTIAKKGQAIGKSQANV 318 Streptococcus s...
WP_003100860 233 PDINGLFVGYSEKNGASFMASSKQNKMHLVTIVLNAKSTDTDEFPHFKATNQLLNHIYSHFEKKALISKGSKLSGKTLTV 312 Streptococcus i...
WP_018367107 233 QGINGLLVGTSEKGGSSFLASSQENDMHLVTIVLNVDKNKEDGLLAFTATNSLLNYISQSFEKVVLLNKNQVVIDNKLTV 312 Streptococcus d...
WP_007893667 233 KGANGLFVAFSENNGASLITSSTENKMSVVSIIINTEKSKDDKLAHFTTANTLLDNIAQKYEPVTLLEKGQHLKNKDFPV 312 Streptococcus p...
WP_003108557 233 VGINGLFLGSPEKSGPTFIASSKINKMKVISIVIGAHQEDNDVTEPFKTTSLLLDYLYQNFERVTLLKKNQVIKDKSFAI 312 Streptococcus p...
WP_015016939 239 AGVDGLKTGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANHLLDYVAKRYHRRKILKKGSLMTERPFSV 318 Streptococcus d...
WP_003048660 234 TGVDGLKTGTTEIAGHCLAVTSIENGMRVITVILNADGSDQNQDTRFEQANHLLDYVDRTYHRRKILKKGRLVSQRLLPV 313 Streptococcus c...
WP_008088737 239 SSVDGLKTGTTEKAGHCLVASSVENGMRVITVLMNTDHSEQNSAARFEETDKLLNYIKEEYRTYQLVTKNKALSQKELAV 318 Streptococcus i...
WP_007893621 236 NGVDGLKTGTTTKAGQTYIGTAVQDKMRVIVVILNATDAPKDSNARFVEANKLFDYSFQNYQKITI-PKGKPFS-TKLSI 313 Streptococcus p...
WP_012657887 236 LGVDGLKTGTTGCAGQTYIGTAVQDNMRVIVVILHANNAEQDSEARFVEANKLFDFAFQNFQSITI-PKAKPYA-TKLAI 313 Streptococcus u...
WP_014633785 319 LDGKSKQVTAVAKSDFNIIQKIDTNNSkhIKV--TTNQVQAPVNSSDKVGTATFEDKSLVGEG--YLpnQGMPSMELVAG 394 Streptococcus s...
WP_003100860 313 ADSPQKEVSLTAKETLYIVQKKGEDTSdsIEVrpLHKQVTAPVKAKQTLAKASFKDKAIIGTG--YL--GETPSVELVSK 388 Streptococcus i...
WP_018367107 313 FDSPISQLSLIADKELTMIQKKGSSYKneLEIiaSQKQFYAPISQKKVLAHATFKDPNPIGEG--YL--GASPSVSLRSH 388 Streptococcus d...
WP_007893667 313 TDSPMKHISLISDKTLTIIQKRGTTTTtdLVIrpLQKEFRAPIKQNQKLATASYKDSDRIGIG--YL--GDSPQVSLSAQ 388 Streptococcus p...
WP_003108557 313 KDSPDQSVSISPKEDMTIIKKIGTTHQneIIYnkNENPFYAPLANGDTLATAKYKDPNIIGMG--YI--GKSPVVTIQAN 388 Streptococcus p...
WP_015016939 319 VNGTAQTLSTYAAKDVTLVLGTDELAPrpEQFvvSTDSLLVPIAKGEVVAYLT--SPRIAGER--YL--KKPERIPLKAS 392 Streptococcus d...
WP_003048660 314 QDGQAKELPVFVAEDVTVILGRGERVPkpEQFriSDFSLLAPIAKGEVVAYLT--SPRIAGQAvrYV--KKPEYIPLKAS 389 Streptococcus c...
WP_008088737 319 IDGKKDHVSLIPQKDFKVVVQKGEKLPkiTDMnlSSKSIQAPVTKGQLVSSLLPLKHQDVSVR--FL--KEGEAIPLKAK 394 Streptococcus i...
WP_007893621 314 SNAKQKMITFKSNRDFTVIQPINVQTi-hYKIvpNKEHTTAPITKGEQLGKITLNDQSS------YL--WEKPSSPIFAT 384 Streptococcus p...
WP_012657887 314 IDGKKKKVAFISHKDFTIVQPKNDDSi-nYKViqEKSKTKAPIEKDEKLGRIQFIDSSD------YL--KKKPSVAIFSF 384 Streptococcus u...
WP_014633785 395 KEVK-KSFFLKVWWNHFVNFV 414 Streptococcus salivarius
WP_003100860 389 DDIK-KSFFLKVWWNHFVNYV 408 Streptococcus iniae
WP_018367107 389 KAIA-RSFFLKVWWNHFVSYV 408 Streptococcus didelphis
WP_007893667 389 QRAP-RSFFLKVWWNHLVTYV 408 Streptococcus pseudoporcinus
WP_003108557 389 QEVK-RSFFLKVWWNHFVDYV 408 Streptococcus parauberis
WP_015016939 393 QSLK-KASDLQLWWRGLLEKL 412 Streptococcus dysgalactiae
WP_003048660 390 QSLK-KASDLQLWWRGLFEKI 409 Streptococcus canis
WP_008088737 395 EAIAvKPSLVQSWWEYIMEWF 415 Streptococcus ictaluri
WP_007893621 385 KSIK-ALSI----WEKFKSFF 400 Streptococcus pseudoporcinus
WP_012657887 385 ETVK-KLSL----FEKWFRFN 400 Streptococcus uberis
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