2LOM,2LON


Conserved Protein Domain Family
HIG_1_N
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pfam04588: HIG_1_N (this model, PSSM-Id:398334 is obsolete and has been replaced by 461361)
Hypoxia induced protein conserved region
This family is found in proteins thought to be involved in the response to hypoxia. Family members mostly come from diverse eukaryotic organisms however eubacterial members have been identified. This region is found at the N-terminus of the member proteins which are predicted to be transmembrane.
Links
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Statistics
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PSSM-Id: 398334
Aligned: 203 rows
Threshold Bit Score: 27.4366
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2LOM_A        28 PFVPVGIAGFAAIVayglyKLKs-RG-NTKMSIHLIHMRVAAQGFVVGAMT 76 
EEN59025      37 PMVPIGLAGTVAAVmygavNYRkyRRaGMSTSVFLMQFRVIAQSMVVGCMT 87  Florida lancelet
XP_004922992  27 PFMIIGLLGLVGVCgygaySYK--KRgKMSTSVFLMQLRVAAQGTVVSALT 75  domestic silkworm
OWR47034      27 PFMVIGLASLAAAVgygvySFK--NRgPMSTSVFLMQFRVIAQGATVGALT 75  Danaus plexippus plexippus
XP_004922993  27 PFMVIGITGLVAAVgygayAYK--RRgAMSTSVFLMQFRVIAQGTVVGALT 75  domestic silkworm
Q7JW46        27 PFMLVGIAGFVAAGligayKYR--NRgSMSTSVFLMQLRVAAQGTVVGCLT 75  fruit fly
Q7QE07        28 PFMPIGIAGLVAVCaigayKYK--HRgAMSTSVFLMQLRVAAQGTVVAALS 76  Anopheles gambiae str. PEST
9_pfamImport   3 PFMPIGICGLLMACgygayMFK--RRgKMSTSVYLMQLRVAAQGTVVGTLT 51 
EEC14816      36 PFMVFGLTGCLCACaygayMYR--RRkFFDTSVYMMQLRVAAQGTVVGFLT 84  black-legged tick
EFA01076      30 PFFPIAIGVCTLAVgygayMFK--NRgKMSTSVYLMHLRVGAQGAAVASLT 78  red flour beetle
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