Conserved Protein Domain Family
PT_UbiA_UBIAD1

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cd13962: PT_UbiA_UBIAD1 
1,4-Dihydroxy-2-naphthoate octaprenyltransferase
Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Statistics
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PSSM-Id: 260125
Aligned: 445 rows
Threshold Bit Score: 68.3087
Created: 5-Mar-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1: putative active site [active site], 7 residue positions
Conserved feature residue pattern:n [ed] d n n d dClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on homology modeling using structures of trans prenyltransferases that are helical enzymes containing two D-rich motifs in the active site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                       ##  #           
ACB77124     10 ISAARPRTLpaAIAPVIVGSALAWrddvfep------------aaaalcLGFALLVQIGTNf-ANDYYDFMRGadta--- 73  Opitutus terrae ...
EAT13720     55 FKAMRVISLtaTFMPALATVLLLIlldvpin-----------wgntissILALLLLQVAVNi-FNDVADYKKLidlp--- 119 Oceanobacter sp....
EHP46624      8 IQNSRSNALpqSLLPAFLAVAMAFrqpdfsm------------slsilaIGGVVLGHLGLNl-WDDYFDYRRKetayrdk 74  Odoribacter lane...
ADO84209      8 IKASRLPSQsyIFFPLLLGQGFYYnitrnfs-----------ivffilvQLFGLLIQLYIVy-ANDYADYEIDktndt-- 73  Ilyobacter polyt...
EFI35920     37 FQAARMPSQvyIFLPLLMGQAMAFtqgafsw------------svflfcHLYGLAMQLFIVf-ANDVADEDTDrlnst-- 101 Desulfonatronosp...
ZP_21234825  12 LQASRLPSQsyIALPLLLGQFIAVhatggalr----------vgtlvavQLFGVLDQLFIVy-ANDWADQETDrrnrt-- 78  Cystobacter fusc...
CCG46505     13 WLLMRSIAVvsSSVATIVSTVLPLylyftfstn-------qlmilflllIFGAFLIHGILThiLNDYVDDLSGtdtys-- 83  Halobacillus hal...
AFV22863      9 FEMIRAYGLlaMVAPLVISTAVAVivtggfd-----------rlgllfaAVVGFSIHVSMNv-YNDIYDTKQGcdtles- 75  Methanolobus psy...
EKE32864      4 PSLFRTAFTlvRLIAVLFSSFAAIiatilpmylyysysageltlvllllLAGALLIHGFLThvLNDYADSMSGtddks-- 81  Salimicrobium sp...
EDM81373     37 LYAAKVDSWpkLLVPCLFGQALGVsaagald-----------wsalalgLGFTLFDLLFVVf-LNDWGDRRVDrikrq-- 102 Plesiocystis pac...
Feature 1                                                                                       
ACB77124     74 -------arvGPQRAVAAGWVSPatm---rrAMWATFATaf-aCGLGLLl-----WGGPWLILIGl--aSILCGIAYTGG 135 Opitutus terrae ...
EAT13720    120 -------dslGGSGVIQQAWLTSrqm---syLAWSSLFL----SGLFALpa---iMYAPVPVLICal-vAFFGVLGYSGW 181 Oceanobacter sp....
EHP46624     75 maragirariAKCSYLTSGAATIgql---rnACLVFCLLal-lIGLILFl-----SRGIFILYIGl--iTGFLGLSYSGN 143 Odoribacter lane...
ADO84209     74 -----fnifsGGSRVLVENLISKkem---kkAIILVVGLng-fLGIVLTl----gFRRILSLPIIi--lSFLLLWAYSYP 138 Ilyobacter polyt...
EFI35920    102 -----ytifsGGSRVLADDCLSSrsl---fsAAGVSALLcl-lAGVLLAw----fSSGWGPLLLVl--lGLVLLWAYSFK 166 Desulfonatronosp...
ZP_21234825  79 -----atvfsGGSRVLVEGRLSPral--graAIACAVALvgvsVGLAVV------HRAPLLGVLAv--aAVALLWAYSYP 143 Cystobacter fusc...
CCG46505     84 -----pailsGGSRVIQSGFISSanl---wkIGKGLLLL----LGLTIIll---fISGYPKLGILla-vGVWGAVSYSLP 147 Halobacillus hal...
AFV22863     76 ----gqsmfsGGSAVIVKYPELEgkmftiarAGLVVGFLg--tLGLLYIs-----ERDMWPLFIFlflaAAFLSKYYTAG 144 Methanolobus psy...
EKE32864     82 -----pgilsGGSRIIQNNLVTAgtl---lkIGIISIIVil-tAGIVLFfs---gYIKIAILLLI----GLWSSITYSMP 145 Salimicrobium sp...
EDM81373    103 -----mfpdgCSPKTIPDGILPAral---liAGLIAGVGa---LGLAALgqfamaRPSLLPAAAG----LLLIFVAYTLP 167 Plesiocystis pac...
Feature 1                                                                ##  #   #              
ACB77124    136 PWPla-yhGLGDVFVFIFFGLVAVGATYFVqagaiyPDVLLAAVPIG-LLATNILVVNNYRDVETDAaa--gkRTLVVRW 211 Opitutus terrae ...
EAT13720    182 PFYfk-ykGLGDVVVWLLCGPLLVFGMSSAvsgvfwEPVLFVGFYFG-FAATAILNANNMNDMKIDLas--gaTTLAIKL 257 Oceanobacter sp....
EHP46624    144 PLRls-yrGLGELLVGFMFGPLLMAGVYYSacgqldLSVILVSIPVG-LLVANILYTHSIMDFEPDKsv--gkMTLAVLL 219 Odoribacter lane...
ADO84209    139 PIRls-yrGGGEVLQTMGVAVILPLFGYYVqggtvqGFPWIFLLFFF-PLQLGCAMSTSLPDYPSDKkg--nkKTTTVIF 214 Ilyobacter polyt...
EFI35920    167 PFRls-yrGGGELLQMLGVGGVLPMLGYLAqhgslsGIYWPYMGLML-LLALSCAMSTSLPDEPSDRls--lkKSSSVLL 242 Desulfonatronosp...
ZP_21234825 144 PLRls-yrGGGELLQMLGVAGVLPLYGYLAqggalaDFPWALMVMLW-PTHLACSIATALPDEPSDRhs--gkHTLPVRV 219 Cystobacter fusc...
CCG46505    148 PLQfsyrpFLGEWLSTFPSVLFLGLAGAWLtldslpEWVMQNAVINA-LFCIAWVMVHHIPDREADKkatpmkQTSVVWA 226 Halobacillus hal...
AFV22863    145 PFKfa-yrGLGEIVVWLGFGPFAILLYAAAqgipfhPMVVSIMPITG-LSTLIFAWGGEMVDMPCDRka--gkRGLVLRM 220 Methanolobus psy...
EKE32864    146 PLRlgyypLVGEWFSMFPAVFFIGLAGPWIimesppLWAYQNALLIA-LFTQAWVMVHHIPDRFADEnasppkITTVVWM 224 Salimicrobium sp...
EDM81373    168 PVRln-yrGGGEWLELVGVGVGLPLFHLYLqsg-elWTRELLMLPGFaLLALCSAVASGMADEQSDRrg--gkRTYVSEY 243 Plesiocystis pac...
Feature 1                                                                                       
ACB77124    212 GRRAARl---qHAGSLLIALLVPGWfcwteg-----tlwrlLPLAIl---pLAGSHVRRLRAAQtpvelia--------- 271 Opitutus terrae ...
EAT13720    258 GFTNARllqiiYYLGVVLSSCALAWffgp---------wllLPLIAt---pLVALQCKKLYSVHtgcddslk-------- 317 Oceanobacter sp....
EHP46624    220 NNKKAMll--iLTVFLFLPFLLIGYgimaac----lpayywWVMGVf---pMALGLFYFMIKYIkyptqeidryfwmgpm 290 Odoribacter lane...
ADO84209    215 GFEKTKgy--iIRINFISLFIFYRVawlqlnsl-ksytilaIPLICnl-ylLYIKNKAKISSSYldk------------- 277 Ilyobacter polyt...
EFI35920    243 GGRLNQr---lILALNAGAFFLLALfmlhg------lgytgMYLIAllclgLWFSGVLLLDQKPgslgl----------- 302 Desulfonatronosp...
ZP_21234825 220 GGERAAw---vIVALNGLTWALAPRglasvgl--evgaalwVPVAAt----LAVVGVRPAPPGSwriqvr---------- 280 Cystobacter fusc...
CCG46505    227 ADRFGIa----YARLPALMYFTFTVlcafwlg--adrgvaaLGVVAma--gASIYLIFKMSMHDyeqvsay--------- 289 Halobacillus hal...
AFV22863    221 GLKNSIyglliLHALLIANVVFAAYlftn---------gwiLLLAMv---pYLLLLPKIFALLTaglengeqiyegar-- 286 Methanolobus psy...
EKE32864    225 KNKFGDt----YSRAPALLYFLLCSlcafwifmerpiagagAAILSfa--aIFIVLRMDVDDNKdvsrkq---------- 288 Salimicrobium sp...
EDM81373    244 GNRAARal--vERVMLFAALLWAVSirlah------vvpapIGALAl---vVVLVNWRRLRKLSpqattnafeaqrly-- 310 Plesiocystis pac...
Feature 1                                   
ACB77124    272 ---------llvdtgkLLALYALLAGAS 290 Opitutus terrae PB90-1
EAT13720    318 --------dirfdaakTHLLLGILLCIA 337 Oceanobacter sp. RED65
EHP46624    291 nnwekikgtgiewfmiRWYLARNLLSIF 318 Odoribacter laneus YIT 12061
ADO84209    278 -------------fvaVNILIIISLTAG 292 Ilyobacter polytropus DSM 2926
EFI35920    303 -----------svfvaSSVSFSLLPMAG 319 Desulfonatronospira thiodismutans ASO3-1
ZP_21234825 281 ----------vaaaitATLAMVAWPLLG 298 Cystobacter fuscus DSM 2262
CCG46505    290 ----------ekiiliLAMVNAVWLGIF 307 Halobacillus halophilus DSM 2266
AFV22863    287 ---lnffsqpnplnmvKSSIKKILIILP 311 Methanolobus psychrophilus R15
EKE32864    289 -----------kklflLTAIVGLWSGLF 305 Salimicrobium sp. MJ3
EDM81373    311 --khylhqaqwrsamiLVVVIVGLTLLG 336 Plesiocystis pacifica SIR-1

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