Conserved Protein Domain Family
Nramp

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pfam01566: Nramp (this model, PSSM-Id:396239 is obsolete and has been replaced by 426327)
Natural resistance-associated macrophage protein
The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.
Statistics
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PSSM-Id: 396239
Aligned: 84 rows
Threshold Bit Score: 174.288
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q74JG3         54 WAASINGGQSFNYLLISTILISSLMAMLLQYMAAKLGIVTQMDLAQAIRARTSKRLSFILWIIIELAIMATDVAEVIGAA 133 Lactobacillus ...
CAM01838       23 LTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRIAGFGVFAITLMFSVGNAVGSG 102 Saccharopolysp...
Q6AKY6         42 LASVAIAGATYGYKMLWVVILSAVFGTTTQYLAARVGVLEGMGIIAATEKHLGKRWAWILTIDALLATWLAAMVLMNALA 121 Desulfotalea p...
Q18IT5         34 MASLLSGGANFGYALLWVVVISAIFGALAQYLATKLALETNEGLIKTVERRLGTKWAWLLVADVVLVAGFAQLVIMKTVA 113 Haloquadratum ...
Q5V5I1         54 IASLVTAGGAFGYSLLWVVVLSAGAGALAQYLAMRLGLLTERGIVAVVEDHLGETWAWLLVGDAVLAAGVAQLVIMKTVA 133 Haloarcula mar...
jgi:Ppha_1894  34 WATNIEGGSKFGYELLWVVTLGTLMLVLIQHMAAKLGIATGKSLAVNIRDHFPKQVSAFLGVSVVLACIATDVAELLGGA 113 Pelodictyon ph...
Q8AA36         43 WASNFAAGSEFGYSLLWVVTLSTIMLIVLQHNVAHLGIVTGLCLSEAATKYTPKWVSRPILGTAVLASISTSLAEILGGA 122 Bacteroides th...
Q97LD4         40 WASNVSAGSDYGYSLLWIVTLSTIMLIILQHNAAHLGIVTGDCLSEAVSKKFKPWLTNIILYSAIGAAISTAMAELLGGA 119 Clostridium ac...
Q8RBX2         42 WASNVAAGSSYGYKLLWMVTLSTIMLIILQHNAAHLGIVTGYCMSEAATKFLKPFTSRLVLISAVFAAILTAMAEILGAA 121 Caldanaerobact...
WP_008780456   40 WATNLAAGSEFGYALLWVVTFSSVMLIIIQHNVAHLGIVTGLCLSEATNKYMPRVLSRPILGSAMLASVSTSLAEILGGA 119 Bacteroidales
Q74JG3        134 IALNLLF-KIPLVIATFITVFDVLLLLLlsKVGFRKIEALVSCLIMVILLVFTYQVMLANPNWKNIFLSAL-PSPELvaq 211 Lactobacillus ...
CAM01838      103 LGLSLVFgGSPTWWTPTCTAVVVAILFA--RRLYTVIEKLVLVLVAIMAVSFVATAIVTRPDWGAAATGSVvPVVPA--- 177 Saccharopolysp...
Q6AKY6        122 GVTSLIT-GVDTPYWGVLYGVLVALFLV--RRGYRNFETLCKVLVIFVVACFMATLFMADLSLPAIGEGLL-PNFPGg-- 195 Desulfotalea p...
Q18IT5        114 SVSGLLM-PFGAESWGVIWAVFLTVGLA--GGGYRIAEIGAKVVVTGVVLAFIASLFVVPIDSGAAVSGLF-PTVPI--- 186 Haloquadratum ...
Q5V5I1        134 TVSATVT-GIDARIWGVVWALILAAGLA--GGGYRFLELAAKILVLLVVVAFVASLFVVPIDAGAAVAGLV-PSVPS--- 206 Haloarcula mar...
jgi:Ppha_1894 114 IGFSLLL-GMPLWMGALLTLLLELFLII--SQRYHRVETIIVGFLGVITLCYLAELFIVRPDWSGVASGLVvPRVGR--- 187 Pelodictyon ph...
Q8AA36        123 IALEMLF-DMPIMWGAVLTTLFVSIMLF--TNSYKKIERSIIAFVSVIGLSFIYELFLVEIDWPAATMGWVtPAFPK--- 196 Bacteroides th...
Q97LD4        120 IALNMLF-RLPIKIGTLIMLSLVIWMLF--SSSYKKLERWIIGFVSIIGLSFIFELLLVKVNWQVAAVSFVsPSFPK--- 193 Clostridium ac...
Q8RBX2        122 IALQMLF-KIPIKIGSLITVVFVSWMLY--TNSYKKLEKWIISFVSLIGISFIFELSLIDVKWAEVASSWVkPEFPA--- 195 Caldanaerobact...
WP_008780456  120 IALRMLF-GMPIKAGAVIVTIVCLAMLF--SNTYSKTERWIITFVSIIGLSFLYELALVDVDWGQAVVGWVkPTFPE--- 193 Bacteroidales
Q74JG3        212 hpvvngLSPLTGSLGIIGATVMPHNFYLHSSICQTRK--INHdNLADv-qNAVRFTTW-DSNIQL-IIAFFVNVLLLIMG 286 Lactobacillus ...
CAM01838      178 -------GVGLLIVALVGTNFSINAAFYAGYASRERGlrR-----EQ-----YRQTTLvDTIPGI-VAPGIMTALVITAA 239 Saccharopolysp...
Q6AKY6        196 ------IDAALMMAAIMGGAVHITIIGMHTYNTNARGwkI-----KD-----LSLARF-DTFSSMgMAFGLYSVAIFLVD 258 Desulfotalea p...
Q18IT5        187 -------GGAIAAAGIVGGAVHVTIITMQTYTVKARGwtQ-----SD-----ADIARF-DISVSMlVAFGVFSIATFLVA 248 Haloquadratum ...
Q5V5I1        207 -------GSALVAAGILGGAVHITLITMHSYTMRARGwtR-----ED-----YDLATV-DVGASMlVAFGIYSLAIFLVT 268 Haloarcula mar...
jgi:Ppha_1894 188 -------ESIYVALAILGALVMPHNIFLHSNVIHSRE--WGI-SEEEk-rELLRYEKM-DTILAM-TLGWVVNSSMIIVA 254 Pelodictyon ph...
Q8AA36        197 -------GSMLIIMSVLGAVVMPHNLFLHSEVIQSHE--YNKkDDASi-kKVLKYELF-DTLFSM-IVGWAINSAMILLA 264 Bacteroides th...
Q97LD4        194 -------NSMPIIMSVLGAVVMPHNLFLHSEIIQSRQ--WNVeKEDVi-kRQLRYEFL-DTIISM-IVGFAINSAMVLLA 261 Clostridium ac...
Q8RBX2        196 -------GSMPIIMSVLGAVVMPHNLFLHSEIIQSRQwnLED---EKvivKQLNYEYF-DTIFSM-IIGWGINSAMIIVA 263 Caldanaerobact...
WP_008780456  194 -------NSMLIIMSVLGAVVMPHNLFLHSEVIQSRE--WNLeDESVi-kKQLKYEFY-DTLLSM-VIGWAINSAMIILA 261 Bacteroidales
Q74JG3        287 AAVFK-SGAVKDSSFFGLYDALSNttmlsnpiLISvAKTgilSVLFAVALLASGQNSTITGTLTGQVVMEGFI-HLKMPL 364 Lactobacillus ...
CAM01838      240 AAVLPgAGGEEGASLKQFSAVLTP--------IAG-EAG---QTVFSLGFTGAAISAMIANATAGGTLLSDGL-GYGNRL 306 Saccharopolysp...
Q6AKY6        259 VAVLH-PNGIAVKRATDAALALKP--------LLG-DSA---MKIFMVGLWAATLSTLSPTFMAGAYFLSDKM-GWQLDV 324 Desulfotalea p...
Q18IT5        249 AGALFgNIDAQGLQAIGAAQALEP--------IAG-SFA---QRVFLIGLLGAAVSTLGGNTLVPVYVIADKL-TWETNV 315 Haloquadratum ...
Q5V5I1        269 ASVLT-SGD---LTTVGAAEALGP--------LVG-DSA---RWLFLLGLWGAAVSTLGGNTIVPPFLLADKL-GWGTTI 331 Haloarcula mar...
jgi:Ppha_1894 255 AAVFF-HNHVPINSIEQASATLKP--------LAGp-LA---GLLFAVALVFSGVGSSITSSMAEADVITGFLgRPADPR 321 Pelodictyon ph...
Q8AA36        265 AATFF-KSGIQVEELQQAKSLLEP--------LLGs-NA---AIVFALALLMAGISSTITSGMAAGSIFAGIFgESYHIK 331 Bacteroides th...
Q97LD4        262 ASTFF-KMHVSVSELSQAQALLKP--------LLGg-SA---SVVFALALLFSGIASTVTAGMAGGSIFAGIYkEPYDIE 328 Clostridium ac...
Q8RBX2        264 ASAFF-TNNVTVMELNQAQQMLKP--------LLG-NAS---AVVFALALLFAGISSSITAGMAGGSIFAGIY-GEPYDI 329 Caldanaerobact...
WP_008780456  262 ASTFF-KQNIAVDELDQAQQLLVP--------LVGn-NA---GVIFAAALLLAGISSTITSGIAGASIFAGFYgEAYNHT 328 Bacteroidales
Q74JG3        365 WARRLFTRLLSVIPVIMCVLMTAKDSIsqqh-falNMLLENSQVFLAFAVPFSIVPLLIMTDDRRMMGQFKNRK 437 Lactobacillus johnsonii
CAM01838      307 -------SSWKVRGGILGVLGFGALVTvlahgaspIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTW 373 Saccharopolyspora er...
Q6AKY6        325 -------KDRRFAGVVFAGCLLSMLGPfvk--gsfFLLLPLMLALGLTGTPLIIAIILYLLNRRT--GSLRNSA 387 Desulfotalea psychro...
Q18IT5        316 -------EDTRYRVLLAGTALVSGAGVfip--gafLGQLVLVLAVGTVGTPFALALVLVLLNDSQ-----TTGD 375 Haloquadratum walsby...
Q5V5I1        332 -------EDNRYRGLLAAVALLSAPGAfig--gnvLGQLVLVLALGTVGTPFAIALVLYLLNSAA--VPESNSL 394 Haloarcula marismortui
jgi:Ppha_1894 322 TMFYRVAVFVTAIPALLVILFSLDSFR----------ILILSQVVLSLQLPFTLIPLLMLCRDRKVMGSFRSGT 385 Pelodictyon phaeocla...
Q8AA36        332 DSHSQVGVILSLGIALLLIFFIGDPFK----------GLLISQMILSIQLPFTVFLQVGLTSSRKVMGNYVNSR 395 Bacteroides thetaiot...
Q97LD4        329 DSHTQIGVIITMVLAAVIIFFIKDPFK----------GLIYSQMILSIQLPITIFTQIYLTSSKKVMGKFSNSL 392 Clostridium acetobut...
Q8RBX2        330 HDAH-TKVGVGITYIFAVLIIFFVKSP--------FQGLVYSQMFLSVQLPITIFLLIYLTSSKKIMGKFANTl 394 Caldanaerobacter sub...
WP_008780456  329 DLHSKLGVLLSFVPALAIIFLIGDPFK----------GLILSQMLLSVQLPITVFTQVYLTSSKKVMGVYANSR 392 Bacteroidales
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