Conserved Protein Domain Family
YbeY

?
COG0319: YbeY 
ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme [Translation, ribosomal structure and biogenesis]
ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
?
PSSM-Id: 440088
Aligned: 967 rows
Threshold Bit Score: 77.8916
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_015044585   1 M--E--LD-I---------Sw----E--E-D---S--V--A-EdeqnkiaK-LLR----AGIQKA-------L----LEG 35 
WP_115585724   1 M-----IN-Lt-------------sKl---K---N--LnfD-T-------E-SYK----VQAQKA-------L----QAL 29 
YP_002248706   1 MriS--VE-Vi-------------nR--Q-Rk-iR--Va-S-Kkv----iS-RIK----KIVSFLyetkdkkL----SKI 43 
WP_108673018   1 M--LkeID-VhvtccawrkKvilksEdfQ-Nl--Q--L--SsTg-----fS-DIKrytyEVVnFAfk----hL----NSI 56 
WP_099340962   9 Mv-K--VNlVvd------------hK--KwKf--Ry-L----Kl------NlFLT----KIIKKI-------LlsifSSH 47 
WP_115955853  12 I--I--LN-I---------Kf----Y--I-DypsW--Fp-C-K-------D-ILK----FWLNTI-------F----EKY 43 
WP_009885634   1 M--KssFS-In-----------------S-SrlfKrfFgkNyQ-------A-GVElc-fQIIK--------------SSL 36 
WP_023792536   1 M-----IN-Ik-------------nT--QrKf--N--I--D-T-------N-KIY----QDAEKI-------L----SLL 29 
AKM78729       1 M--TneIT-V---------Hvi--dK--Kf----Et-L----K-------N-PVR----KQVLEI-------L----AVL 32 
NP_110258      1 M--KpsFS-In-----------------S-NylfKrfFgkNfE-------A-GIElc-lQIIK--------------DSL 36 
WP_015044585  36 GG-QD-D---AEIGLVLTNDESIHLLNKTYRGIDSPTDVLSFALR----EKgegepeiyfnpqsdkdkkerleysleeii 106
WP_115585724  30 GY--G-D---FDLGILLTTNATIKKYNATYRDKDKATDVLSFPFH----HIpagt------------------------- 74 
YP_002248706  44 TV--K-NpafLLISVIFVGDQKMKELNSKYRGKNSVTDILSFPYL----ENep--------------------------- 89 
WP_108673018  57 SThHH-Q---LRLAIVLCGTRKMHALNKTYRNLDKSTNILSFSQVikndE------------------------------ 102
WP_099340962  48 K---T-N---FEISILLTGSKNMKNLNKKFRKINKDTDILSFPAE----EKdffd------------------------- 91 
WP_115955853  44 ---SK-Ri--IKITLCIVNKSISRELNKLWRNKDNPTNVLTFPFV----Ip----------------------------- 84 
WP_009885634  37 NL--SfD---PEFALLIVSCSKMKKLNKQFLKRRGCTDVISLCYN----ETet--------------------------- 80 
WP_023792536  30 KY--N-N---FDIGIWFTNNKTIRFYNREYRHKDKATDVLSFPYH----TElqvgq------------------------ 75 
AKM78729      33 K--KE-G---YAIDVLLLGNRKMRSLNKRYREKDASTNVLSFEEP----KQfv--------------------------- 75 
NP_110258     37 QL--SfQ---PEFALMIVSPWKMKRLNRQFLNRKGVTDVISICYN----ENea--------------------------- 80 
WP_015044585 107 deeddkdldeyeednfeeyeeddddLSYCDTTLGDIVISVERARS---Q-AIAYGHSFAREIVYLAVHGTLHLLGYDHGS 182
WP_115585724  75 ---------------------kikpTCDDDKNLGDMIISIEYVQA---A-AKKLNTTFEKRMNRLLIHGICHLLGYDHIE 129
YP_002248706  90 ---------------------------sGNLFLGEIIINPKKVFS---Q-AKQYNKTFWQELDRILAHGILHLLGYDHEV 138
WP_108673018 103 ---------------------------NSDEIVGDIYICYKSIEE---E-IHELNMTFLHRFTQLVVHGILHTIGYDHDN 151
WP_099340962  92 ----------------------rdlKSKKKVYLGDIALSYQYIEA---I-TKKQKTSFDDYFKKMLVHGLLHLIGYEHNS 145
WP_115955853  85 -------------------------VFkILPIYSDIIVCSELIKN---E-SLLLKQSVKNYWAYIIVHSSLHLMGYNHNN 135
WP_009885634  81 ---------------------------gfSLAIGEIFLCPKYIFK---K-AKEIGCNNWFLLTRCLIHGILHLFEFNHEE 129
WP_023792536  76 ---------------------rikvKSPDDKNLGDLIISVEYTAK---E-AKKLQVSLDNHIRRLIVHGICHLLGYDHIE 130
AKM78729      76 ------------------------yPAGTAKRKGEIYLNPDMSSDwwiKrSKKKAEe-FLDIRFLLVHGVLHLFGYDHIE 130
NP_110258     81 ---------------------------gfSPAIGEIFLCPKHIFK---Q-AKQFGCTPWFLLTRNLIHGLLHLFEFDHEQ 129
WP_015044585 183 -EE--DSSVMRRLEE---QVMDQLSLLR 204
WP_115585724 130 -DD--EFKIMIKKEK---SLAKSIDLDC 151
YP_002248706 139 sDS--EARKMRKLEQ---KILSNLKp-- 159
WP_108673018 152 -QN--DADKMESTED---TIMSTLGFPK 173
WP_099340962 146 -FK--NYKKMSLLEK---KIIRN--I-- 163
WP_115955853 136 -FK--SARKMKKVEK---YFLNLLNL-- 155
WP_009885634 130 -SEafESVTMFFQDAiheEILSVWKF-- 154
WP_023792536 131 -DY--DWRRMRAKEG---WLLKNLA--- 149
AKM78729     131 -DG--DATKMERKEI---AIIKLLNk-- 150
NP_110258    130 -SLafESVTMFFQDEiheTVLKLWNr-- 154
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap