1EFD,1K7S


Conserved Protein Domain Family
FhuD

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cd01146: FhuD 
Click on image for an interactive view with Cn3D
Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.
Statistics
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PSSM-Id: 238566
Aligned: 76 rows
Threshold Bit Score: 157.833
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
siderophore
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:siderophore binding site
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                         #                        ##   
1EFD_N        3 IDPNRIVALEWLPVELLLAL--GIVPYGVADt-------------iNYRLWVSEPplp---------dsVIDVGLRTEPN 58  Escherichia coli
P14609       44 SQPQRIVSTSVTLTGSLLAI--DAPVIASGAttpnnr---vaddqgFLRQWSKVAke-----------rKLQRLYIGEPS 107 Escherichia coli O6
NP_670774    70 HKPARIVSTSITITGTLLAI--NAPIIASSAtepntt---ladnkgFFTQWSDIAra-----------rHLIPMYQTEPN 133 Yersinia pestis KIM
NP_230425    49 SQPKRILSTAVTVTGTLLAI--DAPVIASAAttq----------stFFEQWRKLAel----------rqVKKLWPAGSVD 106 Vibrio cholerae ...
ZP_00018328  20 AVPQRVVALHDLDNAYALASl-GFAPIGMGSitlg-------dpfeRLRSLGPIPpal---------eqTVEVGLLYEPN 82  Chloroflexus aur...
AAG47639    107 EAPQRIVSLDELSTELLVSL--GIEPVGVANl-------------aNYRRYIGIGndl--------lerSVALGGAQQPN 163 Campylobacter je...
NP_252848    28 PKPARIVSTTPSVTGILLAM--DAPLVASAAttpsrl----tdakgFFSQWAKVAdq----------rgVEVLYRNLRFD 91  Pseudomonas aeru...
NP_624811    68 KAPERVVSVGYTDDQTVLAF--GIKPVGMVDqyp---------npaGQSPDINTQwpwvkdkwgdtkpeVVMKNGDTGPN 136 Streptomyces coe...
NP_051655    43 KNPQRVVAMDEEALGWLAALgvQSRVVGIGStyfepqdvqggkikaNVLKEGFYGrvg--------lnsPAYIGSWTAPN 114 Deinococcus radi...
AAB97475     62 DAPQRIASVGWANHEVPLAL--GQVPVGMSKatfgd------dndnGILPWVEDKlkelga--dsgdkkPVLFDETDGIP 131 Corynebacterium ...
Feature 1                        #                                                              
1EFD_N       59 LELLTEMKPSFMVWSAGYgp-----sPEMLARIAPGRGFnfsdg---kqplaMARKSLTEMADLLNLQSAAETHLAQYED 130 Escherichia coli
P14609      108 AEAVAAQMPDLILISATGgdsa-lalYDQLSTIAPTLIInyd--------dkSWQSLLTQLGEITGHEKQAAERIAQFDK 178 Escherichia coli O6
NP_670774   134 IKAVAKMRPDLIIISATGddst-lelYDQLSAIAPTLVInyd--------dkSWQELTLQLGQATGHEGDAEQVIDKFAR 204 Yersinia pestis KIM
NP_230425   107 LESVYVEQPDLIVVSMIGadsa-rdqIPLLQAIAPTILVdys--------dqTWQSLAQQLGLATGLEEQAERTIHNFEQ 177 Vibrio cholerae ...
ZP_00018328  83 LEAIASLQPDLILGTRGShq----qiLDQLTAIAPTVLIdqt-------agdDVLSNQRFLASLVGVEDRIDEQLARYEA 151 Chloroflexus aur...
AAG47639    164 LEAIARLEPDLIVGVAYLhl----plFERLDGLAPTLIYqvslasagydgvaIGEAMLAHLGRLTGRQAQAAAVIREGQQ 239 Campylobacter je...
NP_252848    92 IEAVIAQDPDLLVASATGadsaapyrAELEAQGVPTLVVdys--------khSWQELATELGRHTGLERQAQAAIQRFDA 163 Pseudomonas aeru...
NP_624811   137 FEKIAALRPDLIVAVYSEidq---aaYDKLSKIAPTVGRtkgek---epfsaPWQDNALHIAKALGKAEEGEKMVADIQG 210 Streptomyces coe...
NP_051655   115 LEVLTALRPDLIVRLTWDgn----qnYDKLSRVAPTVGYkeg-------gagFWQKGLRDLAKVFGKQVEAEKVIQQVAD 183 Deinococcus radi...
AAB97475    132 FEQVADTKPDIILATYSGisq---edYDTLSKIAPVIAYpdma------wgtSLEDMITISAKALGKAEEGKKLTEDLDT 202 Corynebacterium ...
Feature 1                                          #                                            
1EFD_N      131 FIRSMKPRFvkr-----garPLLLTTLIDp--RHMLVFGp-nSLFQEILDEYGIPNAWqget--------nfwGSTAVSI 194 Escherichia coli
P14609      179 QLAAAKEQIklp-----pqpVTAIVYTAAa--HSANLWTp-eSAQGQMLEQLGFTLAKlpaglnasqsqgkrhDIIQLGG 250 Escherichia coli O6
NP_670774   205 RLNEVKQKItlp------pqPVSAFVYQEv-sGSAKLWTe-nSAQGRLLLELGFTLANvpdtlkdnthtehrkDIIQLGG 276 Yersinia pestis KIM
NP_230425   178 WTKQVRDVLdlp------kgRANIVSYHGp--GVVNAVAkaqSAHAQLLQSVGVVLEEpdpawqa--gsivhrDFLRIHY 247 Vibrio cholerae ...
ZP_00018328 152 RIAALRERYadtln-tleytRIDSYGVGAe-dNYLILFDl--TPGTRVLTDLGARRSKtngn-------vdndPFPAISL 220 Chloroflexus aur...
AAG47639    240 ALDAARQSVreqh---lqgePVAVLYPLVq-qGSFIALNq-qTLIGSLMNRLEVRSPWtlrs--------ahsLHRRIDM 306 Campylobacter je...
NP_252848   164 YTAEVAAAIapp------qgPVSVVGYNIa--GSYSIGRq-aSPQARLLEALGFQVAElpealag--kvtrasDFQFISR 232 Pseudomonas aeru...
NP_624811   211 KLDAAKQAHpef-----adkTAVVLSWYK---DSVAPFTs-tDVRGRLVTGIGFKYETeidkv------aggdFYTTLSP 275 Streptomyces coe...
NP_051655   184 VNRANARKLlaagvfkkydkVVVVAPFAG---GNNWVYSn--VRLIPDLRALGFKDGLntka-------ttlnVGAQISD 251 Deinococcus radi...
AAB97475    203 KIADNLDKYpnlk----gkkALFTSFGGSsdpSKIGFYSv-kDPRMGFLVSHGLTAPKiveeqs----ktaekFWVEVST 273 Corynebacterium ...
Feature 1                                                                                       
1EFD_N      195 DRLaa-ykDVDVLCFDhd-----nSKDMDALMATPLWQAMPFVR-AGRFQRVPavw--------------fyGATLSAMH 253 Escherichia coli
P14609      251 ENLaa-glNGESLFLFag-----dQKDADAIYANPLLAHLPAVQ-NKQVYALGtet--------------frLDYYSAMQ 309 Escherichia coli O6
NP_670774   277 DELaq-glNGKTILLFsg-----vHSAIDALKSNKFLTNLPAIQ-HDNVYAAGydt--------------frLDYYSANN 335 Yersinia pestis KIM
NP_230425   248 EHLtqlqaETTFLITMt-------DQQAQAFLHDPILKNLPSIQ-RKQVYGLGens--------------frIDLFSARE 305 Vibrio cholerae ...
ZP_00018328 221 ERLad--yDADVIFIGv------eAGTQPEPQVLQLLSATFAGQ-NNQIFAVDygv-------------wgfRLVDALFI 278 Chloroflexus aur...
AAG47639    307 RSFa---aRRDCAYCSs------vGRHRRHSSPAPCGRRCRSLS-SSVTPFFPrg---------------tgPLVARVRR 361 Campylobacter je...
NP_252848   233 ENLpa-aiAGDSVFLLga-----sDDDVQAFLADPVLANLSAVR-EKRVYALGpss--------------frIDYYSGRQ 291 Pseudomonas aeru...
NP_624811   276 ERVdl--vDVDRVFVIn------dKADQDALKKFELFTNLDAVK-NGKVSYLLdsegpa-------vgaaisQGTLLSMP 339 Streptomyces coe...
NP_051655   252 EALlg--lDRKTLVVLfpp--ggkYDGADAFLKTPVGQKLRAQSvVYRPEAFApysgp----------lvsiRNSNEVTR 317 Deinococcus radi...
AAB97475    274 EKPee-fdDVDVIISYssgnkaedEKKVKDMQADPLLSKIPAVK-NGNIAFLEngplgaaanpsplsipwaiDRYFATLN 351 Corynebacterium ...
Feature 1           
1EFD_N      254 FVRV 257 Escherichia coli
P14609      310 VLDR 313 Escherichia coli O6
NP_670774   336 LLTR 339 Yersinia pestis KIM
NP_230425   306 IINS 309 Vibrio cholerae O1 biovar eltor str. N16961
ZP_00018328 279 VLND 282 Chloroflexus aurantiacus
AAG47639    362 LLSR 365 Campylobacter jejuni
NP_252848   292 MIDN 295 Pseudomonas aeruginosa PAO1
NP_624811   340 YAVD 343 Streptomyces coelicolor A3(2)
NP_051655   318 LLLD 321 Deinococcus radiodurans R1
AAB97475    352 DGLK 355 Corynebacterium diphtheriae

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