Conserved Protein Domain Family
TmCorA-like_u2

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cd12831: TmCorA-like_u2 
Uncharacterized bacterial subfamily of the Thermotoga maritima CorA-like family
This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the TmCorA-like family are found in all three kingdoms of life. It is a functionally diverse family which includes the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, and three Saccharomyces cerevisiae proteins: two located in the plasma membrane: the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213365
Aligned: 33 rows
Threshold Bit Score: 374.962
Created: 20-Jul-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:oligomer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                  #  ##        # #                                      
YP_003990167  30 SWYWVDFHEPteDEAKLLADFFhFHPLAIEDCLeyvQRPKLDFYd--qYLFVVLHAIeessleaeEVDLFVgqnFVVSFH 107 Geobacillus sp....
CAL28754      28 TIIWYDLNEPteEESDELLNRFdFNPLEMDDTIhvnPRAKYKAYe--nYQNVVFHTIsprdyeieVLNIFIinkILITYH 105 Staphylococcus ...
EHY93269      28 TLIWYDFNDPteTENEVLQSQFkFNKLEIEDTIkgtPRAKYKAYe--tYQYLVFHSMdtpfnrdkALNLFIkdnILITYH 105 Staphylococcus ...
EHR95631      28 TIIWYDFENAtdEENEYLKNHFdFNYLEIDDAIngdPRVKYKEYd--aYQYMIFHSIinddyspiSLSVFLegnVLVTYH 105 Staphylococcus ...
ACT03179      28 AWFWADFDRPtqDEVSLLTDKFgFHKLAVEDCLhhlPRPKIEFYs--dHSFIVVHSLhgekllpeEVDLFVsegYIVTFH 105 Paenibacillus s...
EFV35924      28 AWYWVDFDNPtrSEINLLSTFFkFHELLIEDCLtllQRPKIEITr--qQIFLVSHVLknidadyeTINMFVgknYIVTFH 105 Gemella moribil...
EHM70457      28 QFVWYDFAQPtaSENHILESHFnFNKLEIDDTVngtPRAKFKAYd--tYQYMVLHSIdvqtyaprALNVFTkgrALVTYH 105 Staphylococcus ...
BAE03814      28 KLVWIDFENPtkNDQALLTQRFnIARHHIEESVftvTRPKVSNHpqkkHLYLILHAIshnnfsaePLSITVkgnWIITVH 107 Staphylococcus ...
EHJ08957      28 KMVWYDFNQPtsEEKDILKSKFnLADHRIEESIytvSRPKVAINhtnmQKYLVLHSInsedfsaePMSITVqehQLITIH 107 Staphylococcus ...
EFU83630      28 SLKWMDVVNPtaEEKKLITERFaLIERHIEESVylmSRPKFILNeqqqSTYVLLHAIddhnfsahPMSIHVnkqWMITIH 107 Staphylococcus ...
Feature 1                #   #            #  #       #  #   #     ##  #            ##  #  ##  #  
YP_003990167 108 KQSiHAVNEVWERIksEEDVQQGPFHVMYRIIDKIVDDYFPPIYHIEDVLNELEENANDeti-qeIIEKVFDIRSDLSKL 186 Geobacillus sp....
CAL28754     106 HNViREVNEVYKQIknNYDKDLDCEDIVLYMLDHIVDNYFYYIENISDKVFTFEDEHGTdrtnkyMMDNIFDLRSDIIKL 185 Staphylococcus ...
EHY93269     106 HKPfSILEDVEQMIkhQFNKDLDTSDVALYILDKLVDDYFKHIYDIEDRVFEFEDQNLNsqsikgIMEDVFKIRGDIIKL 185 Staphylococcus ...
EHR95631     106 HKHfPSLKRVAQYNaeNHDSELDCADIVIHILDCMVDKYFNFVYGIEDKVYNFEDKHVDdrysksVMENVFQLRSDLIKI 185 Staphylococcus ...
ACT03179     106 MERnDVVDRAMEKVsrKRHSGLSTRYAAFLVIDEMVDDFFPSLLQIEDRLDAIENEAMSsdtvgrIFDRIYDIRADLLKV 185 Paenibacillus s...
EFV35924     106 LSHiRYINKIIPKIl-QKGEQYSPLHVMHMLVSEIVEGYIPIISKIENRLDEIEETDSYtsg-skIMDEVFDLRSDLLKL 183 Gemella moribil...
EHM70457     106 HHEiESVTQVLKDLq-STERDLDNQQVALHLLDDMVDRYFEPVYHIEDRVYHFEETHVDdtsnqkLMDRVFQLRSTMIKL 184 Staphylococcus ...
BAE03814     108 KYPmEVLSDIITSFn-KSPKAITTIELTTIMVDKITHQYFKYVDHVEDIVFSFEYQNVDkvnnrkLMDDVYNIRSEIIKL 186 Staphylococcus ...
EHJ08957     108 QNDiQALNDITAETl-KTTNVDSIDYIAIRIIDKVTANYFKYIDDVEDTVFSFENKNVDstnnrsLMKDVFTIRSSIIKL 186 Staphylococcus ...
EFU83630     108 RTElDAISQLQNAWqhQQLDITSTDDLALQLIDIITKNYFRFIDEVEDRVFSFENQNVDrtnnkkLMDDVYDIRSEIIKL 187 Staphylococcus ...
Feature 1         #                         ## ##  ## ##  ## ## ###         ######## ############
YP_003990167 187 RRTIVPMRDLLYRIIHSerlqrmKERQLYFHDIYDHLLKLAEMIETNREITS-------DIRDSYLSLNSNRMNTIMMTL 259 Geobacillus sp....
CAL28754     186 NRVIMPMKDVIDTLQNEsqlvqdKRHKMYIQHITEHIDKEESMLQTARDITR-------EIRDNFESYTSFRMNRVMQIL 258 Staphylococcus ...
EHY93269     186 KRIIYPMNELIDNIKESklllvdSKNHMYIQHIEDHIIKQQSILKTAQEVTT-------EIRDNYSSYTSFKMNSVMQIL 258 Staphylococcus ...
EHR95631     186 KRVLFPMQEVVDTMKQEgniikdAKHRMYIQHIDDHLIKQRSVIRTSQEMTN-------EIRENYESFTSFRMNSIMQIL 258 Staphylococcus ...
ACT03179     186 RRVIYPMRDLLYRIVNSerleldDESRVHFMDVYDHLLKLSEKIVDDRETTAdiienvnSVLNQRTNEVTLRTNDIVFLL 265 Paenibacillus s...
EFV35924     184 RRGLLPMRELIHRFLVSrrvemtDNDRKYFHDIYDDLVQQTEIIEANRELAS-------DIRENFMTYNSLKSNNIMMTL 256 Gemella moribil...
EHM70457     185 KRIVYPMRELVDTVMRDadfgdtERKQLYIQHVNDHLIKQRNILQLAQEMTD-------EIRANYESYTSFKMNSVMQVL 257 Staphylococcus ...
BAE03814     187 KRVLIPMEQLLNEIIDEspldvsHEYQLLIKHIHSRLLRQTDTLMACEHITD-------DIKDNNESYRSNRINGVMNVL 259 Staphylococcus ...
EHJ08957     187 KRVLFPMEELLDDFIEEgvynneVQDNQLMKHIHSRLQRQCDTLDACEHMTD-------DIRDNNESYRSSRINKVMNVL 259 Staphylococcus ...
EFU83630     188 KRVLIPMEQLLAQVVDEdmytiaQQQRWLFKHIHSRLQHQRDTLISCEQITD-------DIKDNNESYRSNRINRVMNVL 260 Staphylococcus ...
Feature 1        # ### ###### ########          ##  ##  #          #  #   
YP_003990167 260 TVITTIFMPLTFISSIYGMNFDyMPELHWKYGYFAVLGVMAvIAIAMFFWFKRNGWF 316 Geobacillus sp. Y4.1MC1
CAL28754     259 TIVSMIFLPLTLIAGIYGMNFEnMPELKWHYGYYATLVIMVlISLGCIWYFKRKDMF 315 Staphylococcus carnosus subsp. carnosu...
EHY93269     259 TLVSVIFLPLTLITGIYGMNFInMPELKWHYGYYIVLGIMLaISAGCIYYFKKKNGF 315 Staphylococcus saprophyticus subsp. sa...
EHR95631     259 TLVSVIFSPLTFIAGVYGMNFEfMPELKWHYAYFVCLTLMLiITIILIIFFKKKKWF 315 Staphylococcus epidermidis VCU128
ACT03179     266 TIISVIFMPLSFIVGLYGMNFIdMPELHWKYGYIYAWTLMIiIVAIMVFVFRKLKWL 322 Paenibacillus sp. JDR-2
EFV35924     257 TVISTIFLPLTFIVGLYGMNFDyMPELKWKYGYFIVCALMLgVAVGMLWFFKKKGWL 313 Gemella moribillum M424
EHM70457     258 TLVSVIFLPLTLITGIYGMNFAyMPELKWHYSYFVVLGVMLlIAVGFVIYFKKKKWF 314 Staphylococcus epidermidis VCU012
BAE03814     260 TIISSIFFPLSFLTGWYGMNFSyMPELDWHYSYFVFIAISLvVVVSLITLFKKKNWF 316 Staphylococcus haemolyticus JCSC1435
EHJ08957     260 TILSSIFFPLSLLTGWYGMNFSyMPELQWHYSYFVFTAFSLvIAVVLIIIFKRKQWF 316 Staphylococcus simiae CCM 7213
EFU83630     261 TIISSIFFPLSFLTGWYGMNFKyMPELNWHYSYFAFIGISLiVTITLILFFKKKDWL 317 Staphylococcus lugdunensis M23590

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