1IPJ,2PHL,1UIK,2CAV,2CV6,3S7E,3SMH,4LEJ,5CAD,5E1R,5VF5,5YJS,6CB4


Conserved Protein Domain Family
cupin_7S_vicilin-like_N

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cd02244: cupin_7S_vicilin-like_N 
7S vicilin seed storage globulin, N-terminal cupin domain
This family contains the N-terminal domains of plant 7S seed storage proteins such as vicilin, and includes beta-conglycinin, phaseolin, canavalin, conglutin-beta, a chromatin protein in Pisum sativum called P54, and a sucrose binding protein in soybean called SBP. These 7S globulins also include soybean allergen beta-conglycinin, peanut allergen conarachin (Ara h 1), walnut allergen Jug r 2, and lentil allergen Len c 1. Proteins in this family perform various functions, including a role in sucrose binding, desiccation, defense against microbes and oxidative stress. The vicilin peptides formed by trypsin or chymotrypsin digestion exhibit antihypertensive effects. These plant seed storage globulins have tandem cupin-like beta-barrel folds (referred to as a bicupin). Storage proteins are the cause of well-known allergic reactions to peanuts and cereals. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.
Statistics
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PSSM-Id: 380371
Aligned: 114 rows
Threshold Bit Score: 121.847
Created: 21-Oct-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
trimer
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface [polypeptide binding site]
Evidence:
  • Comment:Each monomer contains two tandem cupin domains
  • Structure:2PHL: Phaseolus vulgaris phaseolin forms a homotrimer; contacts at 4.0A
    View structure with Cn3D
  • Citation:PMID 8182747

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                  # # #                 ##      ##      
1IPJ_A        22 LFENQnGRIRLLQRFnkrspqlenlRDYRIVQFQSKPnTILLPHHADADFLLFVLs-gRAILTLVNn----dDRDSYNLH 96  soybean
2PHL_B        25 LFKNQyGHIRVLQRFdqqskrlqnlEDYRLVEFRSKPeTLLLPQQADAELLLVVRs-gSAILVLVKpd---dRREYFFLT 100 French bean
ABF94466     106 VAASDaGLVTAVDVAda------agTAYRLHFITMSPgTLFLPVQLHADMVFYVHs-gRGKVTYIEeg--dsESSSLQVE 176 Japanese rice
ERN17519      36 IVSTEfGRVESVEVYdgs-----ekEPLNLQFFTLEPsSLLLPLLVEADMVFFVQt-gSGRVSWVEk----gDITHMDIA 105 Amborella trich...
XP_010531167  47 IVETElGEISAVEINdgc----girGKHHIHFITLDPnALLLPVLLHSDMVFFVHt-gSGNLTWVDe----dKETMTEIR 117 Cleome hassleriana
KMZ71709      67 LERTDnGEISAIDVDvddg--cnrnSSYHLEFISMEPnSLFLPVFLHTDVAFYVQtgeGTVVSWIKkddedgSLKKTHVD 144 Zostera marina
F4JQG6        57 IFETKfGQISTVQIGngc----ggmGPYKIHSITLEPnTILLPLLLHSDMVFFVDs-gSGILNWVDe-----EAKSTEIR 126 thale cress
OAY76276      47 VVETEsGTITAVDVRdg------caGAYHLQFITLEPsSLFLPVLLHSDMVFYVHt-gRGRVSYLQedy-khGTQSIDVK 118 pineapple
XP_018676935  47 VASTAsGEITAVDVRdg------ygGAYHLQFITMAPsSLFLPVLLHTDMVFYVQs-gSGRVTYVEede-nhETEHIDVV 118 wild Malaysian ...
XP_020258940  45 IVSTEsGMITAVDVYeryh---gpyGPYHLQFITLDTsSLLLPVILHADMVFYVHs-gRGTINSITe----dGTNRIDVK 116 garden asparagus
Feature 1                     #  # #                                        #   ###          #  #
1IPJ_A        97 p-----GDAQRIPAgTTYYLVNPHdh----qNLKIIKLAIPvn---------------kPGRYDDFFlsstqaqqSYLQG 152 soybean
2PHL_B       101 sdnpifSDHQKIPAgTIFYLVNPDpk----eDLRIIQLAMPv----------------nNPQIHEFFlssteaqqSYLQE 160 French bean
ABF94466     177 r-----GDVYNFDQgTILYIQSNAcgt--reRLQIYAIFTSdsin----------addpRHPTSEVYsf----vsDLLKG 235 Japanese rice
ERN17519     106 r-----GDVYRLRSgSVFYVQSKTtat--geKLRLNALFTRrdyed--------tldefIGTYANLS--------DVVLG 162 Amborella trich...
XP_010531167 118 r-----GDVYRLRPgTIFYIQSNLete-vreKLRVYAFFSGneani---------ydpcFGPYSSIR--------ELLFS 174 Cleome hassleriana
KMZ71709     145 vg---cGDMYRIGKgSFFYIRTRSdpm--rtKLRISALFINqcmpekkktegssttfgrRHPYSNVA--------DLLRG 211 Zostera marina
F4JQG6       127 l-----GDVYRLRPgSVFYLQSKPvdiflgtKLKLYAIFSNndecl---------hdpcFGAYSSIT--------DLMFG 184 thale cress
OAY76276     119 h-----GDVYRLEQgSVFYVESNPspt--reKLRIHAVFNAmnien--------taepfFGAYSNIC--------DLVRG 175 pineapple
XP_018676935 119 r-----GDIYRLEKgSMFYVQSHPdpt--rdNLRIHAIFNAvdtdn--------tkelpAAAYSNIS--------DLVGG 175 wild Malaysian ...
XP_020258940 117 r-----GDIYRLEEgSIFYVRSHPdsa--reKLRIHAIFNTilden--------asgafVGAYSNIS--------DFIRG 173 garden asparagus
Feature 1        #   #  ####    #  ###                #                   #     
1IPJ_A       153 FsHNILETSFHsefEEINRVLlgeeeeqrqqeGVIVELSK------------EQIRQLSRRAK 203 soybean
2PHL_B       161 FsKHILEASFNskfEEINRVLfeee---gqqeGVIVNIDS------------EQIKELSKHAK 208 French bean
ABF94466     236 FeVEVLRPGFGvprEVVESIKstk------tpPAIIPYNPeeededdssnwtEEITDALWGVR 292 Japanese rice
ERN17519     163 FdNKVLQASFKiseELIKEIKsrk------kpQMIVPAVLkekteedsnwklGILEALVGGGS 219 Amborella trichopoda
XP_010531167 175 FdERILRAAFAvpeEVIETLRnat------kpPLIVQGLT------------KNRTEGSEDYS 219 Cleome hassleriana
KMZ71709     212 FdIELLGEGFNvseVELNPIIkps-----ekpPSIIPYTVvtdd-----nsdNSKPPLNIHKK 264 Zostera marina
F4JQG6       185 FdETILQSAFGv-pEGIIELMrnr-----tkpPLIVSETLctpgv--antwqLQPRLLKLFAG 239 thale cress
OAY76276     176 FdEQVLEMGFGvskEVIQGIIsae------rpPSIVPYSQ------------NETEKPSWKEG 220 pineapple
XP_018676935 176 FeDKVLQMAFGvseETILAIKwve------kpPAIIPFPHtsktv--sfgalRGIRSLTAEEE 230 wild Malaysian banana
XP_020258940 174 FdDEVLQMAFGvseEVIHGIKaae------ksPPIVHFEPknetd--evdwrEGIFEALIGGR 228 garden asparagus

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