Conserved Protein Domain Family
PRK04282

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PRK04282: PRK04282 
exosome complex protein Rrp42
Links
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Statistics
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PSSM-Id: 235268
Aligned: 59 rows
Threshold Bit Score: 273.676
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
305663899   6 EQPIIPKIKYNAILGILNKGFHVDRRPLTSYRSFEVKFNIAPNADSSVLFKLGNTQILAGVKLEVGQPFPDSPNEGILIV 85 
119719493   4 ARTFVPSVKKEVILASLAKGERLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAGVKLAIGTPFPDAPNEGVQIV 83 
171185833   8 GKRFISYLRREQIKRLLATRYRVDGREPERVRSVEIRTGVVKTADGSAEVKLGRTHVVAGVKVGLGQPFPDAPDEGVLVV 87 
126459545   8 GKRFISYLRREQIRRLIASKARIDGREVDQVRPVEVKTGVVKTADGSAEVKLGKTHVVAGVKIGLGQPFPDAPDEGVLVV 87 
145592135   8 ARRFISYLRREQIKRLAASKNRVDGRALDQTREIEIKTGVVKTADGSAEVKLGKTHVIAGVKVGLGQPFPDAPDEGVLVV 87 
18313177    8 GKRFISYLRREQIRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDAPDEGVLVV 87 
119872347   8 GKRFISYLRKEQIRKLLATKYRIDGREPERIRNIEIKTSVIKTADGSAEVKLGKTHVVAGVKVSLGQPFPDAPDEGVLVV 87 
146302863   7 NENVIPLIKKESIIALLERGTRSDGRKFTDYRPLSITLGYAKKADGSALVKLGDTTVLAGVKVEEDEPYPDTPNQGNLVV 86 
159040755   5 PFEIIPSLRRDTLRRLISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFELGKPFEDTPNEGNLIV 84 
170290982   4 QEILTHNLMKDYIRDLVEKGQRVDGRGLHEYRPIEVLNGTFTKAEGEAWLKLGETQVLVGVKADLGEPFPDTPDKGVFVS 83 
305663899  86 NAEYLPAASPTFEPGPPDENAIELARVIDRGLREAKVIALDKLVIVPGKRVWIVWLDIYILDHDGNLIDASAMASMLALA 165
119719493  84 NAELSPVASPFFEPGPPGEEDIELARVVDRGFRSAKVVDLAKLSIIPSAKCWTLYIDIYPLDHDGNLVDAAGLAALLALL 163
171185833  88 SAEVLPHASPYTEVGPPDESAIELARVVDRGIRHCGYVDFKKLAVEGGK-AYILWVDLYVINDDGNLVDAANLAAVAALK 166
126459545  88 NAEVLPHASPYTEVGPPDEFAIELARVVDRGLRHCGYVDFKKLSVEGGK-AYVLWVDLYVINDDGNLVDAANLAAVAALK 166
145592135  88 SAEVLPHASPYTEVGPPDESAIELARVVDRGIRHCGYVDFKKLAVEGGK-AYVLWVDLYVINDDGNLVDAANLASVAALK 166
18313177   88 NAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLAVEGGK-AYVLWIDLYVINDDGNLIDVANLASVAALK 166
119872347  88 NAEVLPHASPYTEVGPPDEFAIELARVIDRGIRHCGYVDFKKLVVEGGK-AYVLWVDLYVINDDGNLIDAANLAAVAALK 166
146302863  87 NAELLPLAYETFEPGPPDENAIELSRVVDRSLRDSKAVDLSGLVIEPGKKVWTVWVDISVLDYGGNVLDACTIAAVAALY 166
159040755  85 NLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLVIIPGKSVYSMWVDIYVLNHDGNLIDSSMLAAVSAIA 164
170290982  84 NAELLPVASPTFEPGPPDEGAIELARVVDRAIRSADAIDLGSLVILPGKLVYMIFLDMYVLDYDGNLEDSLTLASLIALG 163
305663899 166 TTFIPYYEVDPLTsnvKIDRTRKLQRLPLN----RYVVSVTVNKIGDLLVIDPTGEEEAIASSKLAISISEEGNIVGIQK 241
119719493 164 DTKLPRTSVQENK----IAVLDEKDPLPIN----TLVVYVTVAKIGEYLVVDPTLEEELTADAKITFGITERGEICAIQK 235
171185833 167 NTQLPAVVKEEQGv-kLDRNNKTPLPVDLN----KAPIAVSIGKIGSVLLLDPTLEEELSLDGRITFTISED-RIVAAQK 240
126459545 167 NAALPAVVKDETGavkLDRNSRTPMPLDLE----KAPIAVSVGKIANVLFLDPIFEEELSLDGRITYTFAQE-RIVAIQK 241
145592135 167 NTQLPAVVKDESGavkLDRNNKSPLPLETS----KVPVAVSVGKIANVLFLDPNFEEELSLDGRVTFTISED-RIVAAQK 241
18313177  167 NTQLPVVVKDEAGvvkLDRNNKAPLPVDIS----KAPIAVSVGKIGNVLFLDPTFEEELSLDGRITFTFSED-KIVAAQK 241
119872347 167 DTQLPVVVKDEQGv-kLDRNNKTPLPIEVS----KAPIAVSVGKIGGVLFLDPTFEEELSLDGRITFTISED-RIVAVQK 240
146302863 167 DAKLPKVVRENDNi--IIQKEEKVTPLPIK----YPVVTVSVAKIGKFLVVDPDLEEEGIMDAKISFSYIPSGNIVGIQK 240
159040755 165 NAQVPRAIIDGEN-----VKLDKSTKIPLNinpqNMPLTVTYYKIDKYLIVDPTLEEEVMSDGRFTVASDGE-NIVALQK 238
170290982 164 RSEIPEVELKENG---EIEVKESKRKLELK----DIPINFSFVKIGSKILLDPTLEEESVSDASITVAINKDGKVCSVQK 236
305663899 242 MGIGYVTEDDINKAIDIALSIGIDNIEKL 270
119719493 236 SGEGSFRPDEVLRARDMALKASSTLFEAI 264
171185833 241 T-IGAFAPQELEAALDLAWKGRGQYAEFL 268
126459545 242 T-LGSFTQQELEAALDLAWRGRESYLASL 269
145592135 242 T-LGYFTQPELEAALDLAIKGRDRYLEAL 269
18313177  242 T-LGYFTQSEIEAALNLALRGRDRLLEAL 269
119872347 241 T-IGTFTSQELEMALELAWKGKEQLITAA 268
146302863 241 SGEGSFSQQEVEVAEGMASATSQKLLEEL 269
159040755 239 -GEGYFTPEEVDSMMNNTLNIVRDLKVKV 266
170290982 237 R-HGTFTVEEILNIVNVARSKWPELARIV 264
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