Conserved Protein Domain Family
XkdP

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COG1652: XkdP (this model, PSSM-Id:224566 is obsolete and has been replaced by 441258)
Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown]
Statistics
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PSSM-Id: 224566
Aligned: 31 rows
Threshold Bit Score: 66.5164
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15888408 291 AMVSKPGKASRVLAMPEAAPPALQPQQATPSQPSAATSETTANNTPVPSSgtaaptaagstavaplTSSVQVTAVEFEGS 370 Agrobacterium tumef...
15600371   1 --------------------------------------------------------------------MGIFAFVKEAGE 12  Pseudomonas aerugin...
15603839   1 --------------------------------------------------------------------MGLFDFVSDIGR 12  Pasteurella multocida
17546867   1 --------------------------------------------------------------------MGFFDFIKEAGE 12  Ralstonia solanacearum
15963800   1 --------------------------------------------------------------------MGLFSFIKNAGK 12  Sinorhizobium meliloti
16766106   1 --------------------------------------------------------------------MGLFNFVKDAGE 12  Salmonella typhimur...
15639036   1 MSQEIGIKLADGSFFPLFTAEGAQRTTLELVTANDQQSRALLSFFKRVSPgdgeasvtsaelepmgALSIDTLSVAAAGG 80  Treponema pallidum
267142     9 VSALYVLLGVPLFVSAASYDDNEFSRKSRAYSELAEKTYDAGEYDVSAEYarlaedfaqkssvyikETMARTTAEDAMNA 88  Treponema pallidum
17230813   9 LAYQDKRFENKLGEFELPINPEQFSQSFKVEYNREQAQGSQRNDPEFKFTk----------------PEELKLDFTFDGT 72  Nostoc sp. PCC 7120
17230979   1 ------MMREYLVQKDDTLFKIAQKHYGDGNLYPIIHEANRDRIGNNPDQ----------------LTIGMTLLIPEIDP 58  Nostoc sp. PCC 7120
15888408 371 KIFVAGSAPGGSTVRALVDDKEIGKSTTEASGHFVIEGDVDLAVGSHIITVEELNADG-TAKVRVRVPFERPQTDQATVA 449 Agrobacterium tumef...
15600371  13 KLWDTLTG---------HEAQAAESLK-----EHVAKVGLGNPN-IQVSVEGDK-------VIASGEVASQEEKEKILLA 70  Pseudomonas aerugin...
15603839  13 KLFSKQED---------AAEALAKHIK-------EDNPGIEDLN---VKVEDGV-------ASIEGTAKSASALEKAVLM 66  Pasteurella multocida
17546867  13 KLFHGGAAAPADASADADAAEAANRAKGEAIEQYIAQQGLTATA-LSVQVDGDQ-------AKVFGVAADQATREKIILC 84  Ralstonia solanacearum
15963800  13 KLGIGGDD---------TPPDAASVEK------ELASHDLGTKD-VKVDVVDDK-------VVLKGVVRDQSTFEKAVVA 69  Sinorhizobium meliloti
16766106  13 KLWDAVTAN-------HDKDDQAKKVQ-----EHLNKTGIPDADKVNVQIADGK-------ATVTGDGLSQEAKEKILVA 73  Salmonella typhimur...
15639036  81 ATIRLEVECDGSRCRARATDVGSGAFQETSFSVLERSSGDATPDEQPAAQIEHVSSFPeDEGGDGSTLTRRRRILLAVCA 160 Treponema pallidum
267142    89 ARTRHAWAKNERIDRAYPTEYLLASEAIKTGGLAFDSKQYDVALTWARKALDALKNVKpESQLLAKAAKEEAARKAAEAR 168 Treponema pallidum
17230813  73 GVVPVNNGKPGEFHQDVADQVRVFLDLVYSMNSETHKPNFLRLIWGDFSFGEKNGFDClLTDLQINYTLFDQTGKPLRAK 152 Nostoc sp. PCC 7120
17230979  59 IPLHLGSTKKG---NVHSMLEALGAFESGVPSGNPQQYQVENSLG-FIGKYQFG------EALLMDLGYYNTSNPYIGGA 128 Nostoc sp. PCC 7120
15888408 450 MQAPSASSSANTTaapaenqstasdrAAFEKLRTDVAKAFGILSNLYKDQATPALDQAIAgrsavviALKslsEFRTAAA 529 Agrobacterium tumef...
15600371  71 LG------------------------------------NVAGVSSVED-KITVAQ----------------------AAP 91  Pseudomonas aerugin...
15603839  67 AG------------------------------------NVAGITKVKVDKVVIVSGE-------------------SLSG 91  Pasteurella multocida
17546867  85 CG------------------------------------NVTGIQSVDD-QMSVST----------------------QAP 105 Ralstonia solanacearum
15963800  70 VG------------------------------------NTLGISKVEASELKVADG--------------------AAAP 93  Sinorhizobium meliloti
16766106  74 VG------------------------------------NIAGISSVDD-QVKTTT----------------------PAA 94  Salmonella typhimur...
15639036 161 FLILLGGVLVGWVlymhg----asrpAVVPSQKVELPRSSAHVAARELERTAVEARVVDLpsetalpETHkekDVPPASP 236 Treponema pallidum
267142   169 KLEEQRIAAQKAQ-------------EERKRAEEEAARKAAEARKLEEQRIAAQKAQEERkraeeeaARKaaeEAARKAE 235 Treponema pallidum
17230813 153 LS-------------------------------------TTFTSYVEQNRRVREEGK--------------------QSP 175 Nostoc sp. PCC 7120
17230979 129 NGVNRN------------------------YWNGTWTGKMGIRSKSDFLKSTTVQETAIR-------------EAFKLNL 171 Nostoc sp. PCC 7120
15888408 530 TEPDFTAFAgditgkarqllatveawpndvaaigkgiaslasrlaelhiiappapvpqvpagpqtfeqaplaesqNSVII 609 Agrobacterium tumef...
15600371  92 EAR-------------------------------------------------------------------------FVTV 98  Pseudomonas aerugin...
15603839  92 EDE-------------------------------------------------------------------------FYVI 98  Pasteurella multocida
17546867 106 ESQ-------------------------------------------------------------------------WHTV 112 Ralstonia solanacearum
15963800  94 AEAKa---------------------------------------------------------------------pVFHTV 104 Sinorhizobium meliloti
16766106  95 ESQ-------------------------------------------------------------------------FYTV 101 Salmonella typhimur...
15639036 237 GAETATSAAaepvees----------------------------------------------------gsgsvkvVRYTV 264 Treponema pallidum
267142   236 ELEKGRVLPaqy-------------------------------------------------------------kvTTWSI 254 Treponema pallidum
17230813 176 DVTH------------------------------------------------------------------------QRKV 183 Nostoc sp. PCC 7120
17230979 172 ERIN------------------------------------------------------------------------QHFA 179 Nostoc sp. PCC 7120
15888408 610 RRGDTLWQ-ISRRVYGQGV----RYTTIYLANED---QIRNPDLIEPGQI------FGVPKEALPNA 662 Agrobacterium tumefaciens str. C...
15600371  99 KKGDTLSA-IAKAEYGNAN----AYMKIFEANKP---MLSHPDKIYPGQV------LRIPE------ 145 Pseudomonas aeruginosa PA01
15603839  99 QKGDTLWK-IAEKTYGNGS----KYTAIVEANKE---VIKDADKIFPGQK------IRLPKVL---- 147 Pasteurella multocida
17546867 113 ASGDTLSA-IAKKFYDDAN----KYPVIFEANKP---MLSDPNRIYPGQK------LRIPAV----- 160 Ralstonia solanacearum
15963800 105 KKEDNLWK-IAEAHYGKGKg--aKHTAIFEANKP---MLTHPDKIYPGQV------LRIPDLDAG-- 157 Sinorhizobium meliloti
16766106 102 KSGDTLSA-ISKQVYGNAN----LYNKIFEANKP---MLKSPEKIYPGQV------LRIPEE----- 149 Salmonella typhimurium LT2
15639036 265 KRGDTLWD-LARSYYKTPW----RYMRIAEFNR-----LKNPDHIVAGTS------IEIPSR----- 310 Treponema pallidum
267142   255 DRECFWNIaKNPAVYGNPF----LWKKLYEANKDkipQSKNPNWVEPETV------LVIPSLKGEER 311 Treponema pallidum
17230813 184 KAGDTLPL-MTHRIYGDPA----YYLQIAKVNG-----LINFRKLATNTD------LRFPPLEKTQS 234 Nostoc sp. PCC 7120
17230979 180 THGQSLENyLGKQALFNSRtitiTLSGILAAAHLr-gPYGLADLLLKNQVsydeygTSILKYLEEYG 245 Nostoc sp. PCC 7120
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