3V0R


Conserved Protein Domain Family
Alt_A1

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cd12798: Alt_A1 
Click on image for an interactive view with Cn3D
Alternaria alternata allergen Alt a 1
Alt a 1 defines a new homologous protein family with unknown function exclusively found in fungi. The unique structure of Alt a 1 contains intramolecular disulfide bonds that are conserved among the Alt a 1 homologs. Residues reported to be IgE antibody-binding epitopes are exposed through dimerization via a conserved disulfide bond and hydrophobic and polar interactions. Further mechanistic structure/function studies will give insight into immunologic studies directed toward new forms of immunotherapy for Alternaria species-sensitive allergic patients.
Statistics
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PSSM-Id: 213998
Aligned: 14 rows
Threshold Bit Score: 116.368
Created: 18-Oct-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Comment:Dimer contacts as defined by submitted biological unit information
  • Comment:Although Alt a 1 normally forms a dimer, it runs as a pair of monomers in reducing SDS-PAGE, consistent with a disulfide linkage between the monomers

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                           ##
3V0R_A              1 MDTASCPVTTEgd---yVWKISe--FYGRKpeg------tyYNSLGFNIKAtn-ggTLDFTCSAQAdkl-------edHK 61  Alternaria...
EFQ32601           16 AIAAPTPQDDGap--seNIDISn--LSVRRqen------gtVTHVSFNLSGd---dAQGLLCSADTgv---------pSN 73  Glomerella...
XP_003299411       26 GNTAPATLPAQgn---fIWRLTn--FKGHRpkg------tyYDSVSFEVYStt-enKLLFTCSHSDagp-------mdER 86  Pyrenophor...
XP_003849140       18 IAAPSAPNPATs----rTYDIKg--FTERKtnd------ddITFVTFEIFGtn-gdTTHVHCIPFDrdtkrqtdnwqdNV 84  Mycosphaer...
XP_001790893       23 DCPNPAHCGETsptvyeNINITg--FSLRKnn-------gaVESISFKLTGde--aQEPIQCSIPKftt-------fpSE 84  Phaeosphae...
jgi:MYCTH_2309458  21 APAAPAPQAETpri-reAVRITd--FYARKgplng-tldgpVSSVSFKITPvrgngTVPVSCSATAaegek--sirfkPT 94  Myceliopht...
ADW79419           23 PGSTGAPPDPNmy---eNIDIAd--FNVRKged------gtIKYVNFKLSGd---dADGLLCEAQNpg--------lpSN 80  Verticilli...
XP_001219545       15 ALAAPAPQAEApei-heTVSIKd--FYARKshlvngtldgpVDSVTFKIIAsreegTIGVTCTAIAaeged--sikfkPE 89  Chaetomium...
XP_001937798       13 AIAAPLSLDPNfe---eTITITaytLVLQNg---------gIHNVVFNLTGn---dATNLDCRSNDsie-------dlSK 70  Pyrenophor...
EFQ33043           15 TLASPTPQVKPid--peDIVIFd--FSARHqtd------gsVDSVGLHLNGh---dEQNLYCGQTGdv--------vlGE 73  Glomerella...
Feature 1             #            # #             ###           ###### #                      # # ###
3V0R_A             62 WYSCgen-sfMDFSFDsd---------rSGLLLKQKVsd-dITYVATATLP-NYCRAGGng-pkDFVCQGv-ADAYITLV 127 Alternaria...
EFQ32601           74 VITC------GDFKYSfsvqk--gnetdYALSIYHTFap-gVGYWGQGDVL-TYCHAGGl---gDLLCDQ--VNPTTIVI 138 Glomerella...
XP_003299411       87 TYFCdm--gvNDMTFSlnrdhgagrdfgGIALLGHPLsdkdISLIGSSYIP-QVCKLTGqg-dlDFACTGt-ADAYINMV 161 Pyrenophor...
XP_003849140       85 IYPCles-eaFYFAYSqe---------sGVLRLFTSGap-tLSFHGTTHIAdPYCHTAGq----DQICQSp-SDAYITLT 148 Mycosphaer...
XP_001790893       85 MVTCd----dGKSNYRvvaikpkdatadADLAIYHQTgq-aSGLWQEAPLPaNYCHAGGng-pdDFICAQi-PDVYTVVL 157 Phaeosphae...
jgi:MYCTH_2309458  95 AYPCeds-ssHWDQYSfevsrp-kpldvFDITVIHKAgp-gFGARGRASVP-TYCHAGGa---dSLVCGQv-ANVTVGLH 166 Myceliopht...
ADW79419           81 VITC------GESKYRfalss--gkqyeFALSLYHELgl-aVGFYGTGEIF-THCRAGGl---gDFICQQ--QNPTTIVI 145 Verticilli...
XP_001219545       90 SYNCdgv-kdTWDQYRfevaei-seqnvYTIMVIHQTap-aFGFWGNADVP-TYCRAGGn---sSMICGQv-AEVTADLH 161 Chaetomium...
XP_001937798       71 IYQCgkfanvTNSPYSfglyatnedesgYGLRLYHAFgv-gIGFYGEGVLN-TTCTRFEpvpisPTYCSQtlQNPVARIP 148 Pyrenophor...
EFQ33043           74 KYAC------GDSKYSfalvk--gvydtWGVRIFHRWgv-aSGASGYRDIP-TYCHGGPl---gSTICTL--QTVVSLYI 138 Glomerella...

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