4ICU,1WJN


Conserved Protein Domain Family
Ubl_TBCE

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cd17044: Ubl_TBCE 
ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
TBCE, also termed tubulin-specific chaperone E, is a tubulin polymerizing protein involved in the second step of the tubulin folding pathway through cooperating in tubulin heterodimer dissociation both in vivo and in vitro. It may also be implicated in the maintenance of the neuronal microtubule network. Mutations in TBCE gene cause hypoparathyroidism, mental retardation and facial dysmorphism. TBCE contains an N-terminal cytoskeleton-associated protein with glycine-rich segment (CAP-Gly) domain, a leucine-rich repeat protein-protein interaction domain followed by leucine-rich repeat (LRR) domains, and a C-terminal ubiquitin-like (Ubl) domain. Ubiquitin is a protein modifier in eukaryotes that is involved in various cellular processes.
Statistics
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PSSM-Id: 340564
Aligned: 59 rows
Threshold Bit Score: 70.3015
Created: 22-Jul-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conserved
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysine K27, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K27/R (Ub numbering) is a lysine conserved in the Ubl_ubiquitin_like family; it is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering), the other 6 lysines are not conserved in this family, for most the residue corresponding to K29 is a conserved Leu, and the residue corresponding to K33 a conserved Asp; may have other functions, for example in NEDD8 K27 is involved in the mechanism of protein neddylation

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            #                                           
4ICU_A         2 QLLTLKIKYPhq-----ldQKVLEKQLPGsMTIQKVKGLLSRLLKvpvSDLLLSYESPKKpg--------------rEIE 62  human
NP_565017    445 GLISITLKCVgps---mgeKPHLTKKLPGsITVGKLKILSENFFKlksIKPRLFLQEEGSp---------------fPTA 506 thale cress
XP_002131428 435 NLLELIIEAPvk-----pdFKPVTKKLPKsMSIGSLKLLIQKLTKieiRNQRLVYISKENpd--------------hVVE 495 vase tunicate
EFC39855     478 EFVVLNIKNVaasvvsssqGHVVEKKIPYgFTIQKLKLMCQRLFKleaSKQRLFYIDVGHs---------------lPEP 542 Naegleria gruberi
CDW74583     487 AKIKLISQCTst------nGKTLEKKLITsMTVGALKAMCAKLFKievIRQSLIYKEESCe----------------PYE 544 Stylonychia lemnae
EKX53278     439 TMLTVTLKSMasd---scsKAPVTRKLPAsMTVANLKRMCQQLFKldvSKQSLYVKSKEEida------------wtADC 503 Guillardia thet...
EFJ23244     439 SLITITIKCVaas---lgeIAPVTRKLPGsMTVGKLKLLCEALFKlkaTKQRLFLEEKESp---------------lPLP 500 Selaginella moe...
EDQ57815     454 NFFAVTIECVaag---vgeCASITKKLPLaTTIGKLKVVCESLFKlpsNQQRLYFKDQAIlttilicpnlyfcdspiPIE 530 Physcomitrella ...
CEF96729     448 ASVSVELVLCle-----saGRTMTKKLPKsTTVGKVKLMCSKLFKftvSSAELFLIVDEDe----------------RVP 506 Ostreococcus tauri
EEY63027     473 SLIKVSIIPMsmq---atgFEPIVKKIPQqMKVSQLKVLIETKFGvqvPAQVLSFRTDSRs---------------lPML 534 Phytophthora in...
Feature 1                               
4ICU_A        63 LEndLKSLQFYS-VENGDCLLVR 84  human
NP_565017    507 LDdeTATLLDVG-ICDGSTLLVD 528 thale cress
XP_002131428 496 LDrdHETLHDVS-IDPGDTIQVL 517 vase tunicate
EFC39855     543 LGddFKDIDFYA-VKDGGTIIME 564 Naegleria gruberi
CDW74583     545 LDedLRQLSFYS-IRDGGEIAII 566 Stylonychia lemnae
EKX53278     504 MDddMKPISFYItQEECDVLMQE 526 Guillardia theta CCMP2712
EFJ23244     501 LDddLESLGNIG-FGQQGVILME 522 Selaginella moellendorffii
EDQ57815     531 LKddLETLADVG-IGPGRIIILD 552 Physcomitrella patens
CEF96729     507 LApdDEPLSRFA-PRNGQRVDIV 528 Ostreococcus tauri
EEY63027     535 LDedNAEVSYYG-MQDGSEVLVN 556 Phytophthora infestans T30-4

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