2LXJ,1G6P,2YTX


Conserved Protein Domain Family
CSD

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pfam00313: CSD 
Click on image for an interactive view with Cn3D
'Cold-shock' DNA-binding domain
Statistics
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PSSM-Id: 278729
Aligned: 34 rows
Threshold Bit Score: 67.2672
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2LXJ_A      2 EQGTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDG----FKSLDEGQAVTFDVEE--GQRGPQAANVQKA 66   Listeria monocytogenes EGD-e
EDW41211   62 VTGTVKWFNVKSGYGFINRNDTReDVFVHQSAIARNNpkkaVRSVGDGEVVEFDVVI--GEKGNEAANVTGp 131 
EGT52594   49 yYGSCKWFNVSKGYGFVIDDITReDLFVHQSNLNMQG----FRSLDEGERVSYYIQErsNGKGREAYAVSGe 116 
Q41188     11 RKGSVKWFDTQKGFGFITPDDGGdDLFVHQSSIRSEG----FRSLAAEEAVEFEVEId-NNNRPKAIDVSGP 77   thale cress
O65639     11 STGKVNWFNASKGYGFITPDDGSvELFVHQSSIVSEG----YRSLTVGDAVEFAITQg-SDGKTKAVNVTAP 77   thale cress
2YTX_A     19 CQGVVCAMKE--AFGFIERGDVVkEIFFHYSEFKGDL-----ETLQPGDDVEFTIKD--RNGKEVATDVRLL 81   human
P18395    519 LLGYVATLKD--NFGFIETANHDkEIFFHYSEFSGDV-----DSLELGDMVEYSLSKg-KGNKVSAEKVNKT 582  Norway rat
P18395     26 ETGVIEKLLT--SYGFIQCSERQaRLFFHCSQYNGNL-----QDLKVGDDVEFEVSSdrRTGKPIAIKLVKI 90   Norway rat
P0A976      5 MTGIVKTFDGKSGKGLITPSDGRiDVQLHVSALNLRD----AEEITTGLRVEFCRIN--GLRGPSAANVYLS 70   Escherichia coli K-12
Q32HR9      5 MTGIVKTFDRKSGKGFIIPSDGRkEVQVHISAFTPRD----AEVLIPGLRVEFCRVN--GLRGPTAANVYLs 70   Shigella dysenteriae Sd197
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