6K15,2COM


Conserved Protein Domain Family
SWIRM

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pfam04433: SWIRM 
SWIRM domain
This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Statistics
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PSSM-Id: 461307
Aligned: 226 rows
Threshold Bit Score: 41.7779
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6K15_D             89 FDI--SKIHEIEKRSNPDFFndssrfKTPKAYKDTRNFIINTYRLS------P---YEyLTITAVrrnvamDVASIVKIH 157
EKG19654          294 ADPdrGELHPSELNVASTLR------LTCATYLYNKRRIFQARVRA------LirgED-FNKTKAqqackiDVNKASKLW 360
ERS99034          415 RDPlvHLLHRDEVGLAASLR------LDCATYLTSKRRIFIRRLEC------ArtpKE-FRKTDAqqackiDVNKASKLW 481
XP_003721311      385 RDPlvGLLHKEEVLLAGCIR------VDCATYLTAKRRIFQRRLEC------MmqpKE-FRKTDAqqachiDVNKASKMW 451
CCU76577          227 SDPfaHLLHPDEVQLAANLR------LDCATYLTSKRRIFISRIAA------SkvgKE-FRKTDAqqackiDVNKASKLW 293
jgi:THITE_2111298 291 NDPyrDLLHPDELILASNLR------LDCATYLTSKRRIFLRRLEC------AekgKE-FRKTDAqqackiDVNKASKLW 357
XP_003349075      312 KDPnrALLHDEELSLAAALR------LDCATYLTSKRRIFMRRIDC------AkigKE-FRKTDAqqackiDVNKASKLW 378
XP_012739312      291 ADPhrALLDPEEVFLAANLR------LDCATYLTSKRRIFVARRECwagtwgGkgkKE-FRKTDAqqackiDVNKASKLW 363
EME47931          332 NDPnrEHLHVQELEVAAVLR------LPCNKYLANKRRVFNERLKS------LregRD-FNKTSAqnvtkiDVNKASRMW 398
EGP90069          447 NDPdrLHLHPQELKVASKLR------LHGNEYLLNKRRIFAAKLKS------LqegTA-FNKTSAqnatsvDVNKASRLW 513
6K15_D            158 AFLEKWGLINY 168
EKG19654          361 AAYEKIGWFKP 371
ERS99034          482 TAYEKVGWLKL 492
XP_003721311      452 QAFDKVGWLDS 462
CCU76577          294 QAFDKVGWLNV 304
jgi:THITE_2111298 358 QAYEKVGWLDI 368
XP_003349075      379 TAYERVGWLDP 389
XP_012739312      364 MAFEKVGWLDE 374
EME47931          399 QAFDNIGWFDE 409
EGP90069          514 SAFDSVGWFDE 524
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