1XJA


Conserved Protein Domain Family
cupin_MmsR-like_N

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cd06986: cupin_MmsR-like_N 
AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain
This family contains bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included is MmsR, a bacterial transcriptional regulator thought to positively regulate the expression of the mmsAB operon. The mmsAB operon contains two structural genes involved in valine metabolism: mmsA which encodes methylmalonate-semialdehyde dehydrogenase, and mmsB which encodes 3-hydroxyisobutyrate dehydrogenase. The cupin domain of members of this subfamily does not contain a metal binding site.
Statistics
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PSSM-Id: 380391
Aligned: 157 rows
Threshold Bit Score: 68.6645
Created: 27-May-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XJA_A        20 VAGLTPIEANGVldffiDRPLGMk----gYILNLTIRGQGVVKNQG----REFVCr--PGDILLFPPGEIHHYGRHpeAR 89  Escherichia coli
WP_108602270  30 VISQLYVTHLGAypsapNHYVARregveqAILIYCLKGTGWLKLDD----ITFEVk--AGCAVLIPPKTPHVYQADk-HD 102 Catenovulum sp....
YP_888284     34 VTRRLLVTDAGFfpratRHGRSRsrgateHVVMVCTAGAGWCRTEE----GAFDVg--VGDAVLLPKGRAHMYGAAe-SD 106 Mycobacterium s...
WP_091035174  28 VTRRLLVTDAGYypaaaDHRMQRprgtdeAIVIVCASGTGWARVGS----GAHRLg--AWQALVIPRGVPHSYGADa-RD 100 Glycomyces harb...
KQM61280      27 ITDRLLVTDAGHfphaaAHGRSRprgadeVVVILCTDGTGHVELQG----QRFGVs--PGDVVVIPAGIPHRYRADp-LD 99  Agreia sp. Leaf210
WP_022873007  29 ITRNLLVTDVGWfprarDHGRRRphgtptAVVMVCAAGRGWCQVSQ----ERVVVr--AGQALVIPSHLPHSYGASr-DD 101 Nesterenkonia alba
SCM74235      34 PLIELLPSDVGHypkaqWHFVERpegisqSVLIYCTDGCGWARVGD----TTLRIr--PGQALVTPAGAPHAYGADp-DD 106 uncultured Pleo...
EDY82889      29 FCRSLYAADIGHypearNHLVKRdqgcpnHILIYCIGGQGWYSLNGe---KRIPVq--AGQAILIPAKSPHAYGSTe-GQ 102 Verrucomicrobia...
NP_252261     41 LSRDLYPTSLGHyr-raRDHRMSrerhdeHLLIYCSEGQGLLRVREgeawREYRVg--SGDLLWLPPGMAHDYAADd-RQ 116 Pseudomonas aer...
WP_076717521  31 LTRDLYLFGAGHyveatGHHMKRdih-ddFLMIYCTAGSGTLSLSKl--kNHLQLqvqEGDMLMLPRGLSHEYKADi-NN 106 Motiliproteus s...
1XJA_A        90 EWYHQWVYFRPR 101 Escherichia coli
WP_108602270 103 PWSLFWIHFDGR 114 Catenovulum sp. CCB-QB4
YP_888284    107 PWTLWWMHVTGS 118 Mycobacterium smegmatis str. MC2 155
WP_091035174 101 PWTIWWAHLAGT 112 Glycomyces harbinensis
KQM61280     100 PWTIWWMHVVGL 111 Agreia sp. Leaf210
WP_022873007 102 PWSIAWMHVSGD 113 Nesterenkonia alba
SCM74235     107 PWTIYWVHLDGA 118 uncultured Pleomorphomonas sp.
EDY82889     103 SWRLYWIHFSGT 114 Verrucomicrobiae bacterium DG1235
NP_252261    117 PWTIFWTHLRGD 128 Pseudomonas aeruginosa PAO1
WP_076717521 107 PWSIYWVHFEGP 118 Motiliproteus sp. MSK22-1
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