1JHW,2FGH


Conserved Protein Domain Family
gelsolin_S3_like

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cd11292: gelsolin_S3_like 
Click on image for an interactive view with Cn3D
Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins.
Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin-like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins.
Statistics
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PSSM-Id: 200448
Aligned: 27 rows
Threshold Bit Score: 101.942
Created: 27-Aug-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative type 2putative
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: putative type 2 Ca binding site [ion binding site], 2 residue positions
Conserved feature residue pattern:D EClick to see conserved feature residue pattern help
Evidence:
  • Comment:Activated actin-bound gelsolin has eight Ca2+-binding sites: six type 2 sites, one in each sub-domain, and two type 1 sites, associated with the first and the fourth sub-domain.
  • Comment:not all members of this subfamily may bind calcium at this site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                           #                          
1JHW_A     245 AQAAALYKVSDAT------------GQMNLTKVADSsp------fALELLISDDCFVLDNGLcgKIYIWKG----RKANE 302  human
2FGH_A     244 RKLAKLYKVSNGA------------GPMVVSLVADEnp------fAQGALRSEDCFILDHGKdgKIFVWKG----KQANM 301  horse
O65570     242 ANDEDKTYNSDITrlf-------cvEKGQANPVEGDt-------lKREMLDTNKCYILDCGI--EVFVWMG----RTTSL 301  thale cress
O81644     233 APIGRKVANDDDIvp--------esTPPKLYCITDGkmepidgdlSKSMLENTKCYLLDCGA--EIYIWVG----RVTQV 298  thale cress
P36418     306 VEQIKLYQVENLNye---------vHLHLIDPIGDVy--------STTQLNAEFCYILDCET--ELYVWLG----KASAN 362  Dictyostelium di...
O96923     179 EPEFFLFKIFTGTd-----------GKPSIKPMEEDeg------iNQEMLESSACFILDCEH--EMYIWLGkgvkKSTKD 239  Dictyostelium di...
P34268     738 AERKKLYKVNIGM------------GFLELPQVELPkg-----iaKQDMLGSKGVFVLDSNS--DIFLWIG----KKANR 794  nematode
NP_200542  235 APLPKKPAVNDDEtaasdgiklfsvEKGQTDAVEAEc-------lTKELLDTNKCYILDCGL--ELFVWKG----RSTSI 301  thale cress
Q24020     729 PVQPRLYQVQLGM------------GYLELPQVELPeq-----klCHTLLNSKHVYILDCYT--DLFVWFG----KKSTR 785  fruit fly
O81643     245 QEQTQTPCAELFWi----------dTKGNLHPTGTSs-------lDKDMLEKNKCYMLDCHS--EVFVWMG----RNTSL 301  thale cress
Feature 1       #                                            
1JHW_A     303 KERQAALQVAEGFISRm---qYAPNTQVEILPQGRESPIFKQFFKD 345  human
2FGH_A     302 EERKAALKTASDFISKm---dYPKQTQVSVLPEGGETPLFRQFFKN 344  horse
O65570     302 DDRKIASKAAEEMIRSs----ERPKSQMIRIIEGFETVPFRSKFES 343  thale cress
O81644     299 DERKAASQSAEEFLASe---nRPKATHVTRVIQGYESHSFKSNFDS 341  thale cress
P36418     363 DQRTVAMANAMDLLHEd---nRPSWTPIIKMTQGSENTLFKDKFKK 405  Dictyostelium discoideum AX4
O96923     240 TLIPVAKKIWTQYDRPeyygkLKLQPIITWVFDGAESCLFKSKFSK 285  Dictyostelium discoideum AX4
P34268     795 LLKMAGQKLVVELHQMi---dRPDYAQVYRETEGEESMMFRSKFAG 837  nematode
NP_200542  302 DQRKSATEAAEEFFRSs----EPPKSNLVSVMEGYETVMFRSKFDS 343  thale cress
Q24020     786 LVRAAAVKLSRELFNMm---dRPDYALVMRVPEGNEMQIFRTKFAG 828  fruit fly
O81643     302 TERKTSISSSEEFLRKe---gRSTTTSLVLLTEGLENARFRSFFNK 344  thale cress

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